Array 1 539395-541535 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR215047.1 Mycoplasma arthritidis strain NCTC10162 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================= ================== 539395 35 100.0 31 ................................... TATTTAATAGAACAATTAAACCTGATTATAT 539461 35 100.0 31 ................................... TAAATTTGTTATCTAATAATTCAGCGATATT 539527 35 100.0 31 ................................... TTTAACATAATCTTCAATGGGGACAAACTCC 539593 35 100.0 31 ................................... TATGCCATGATGATGTAACCTGTTGGTCTTA 539659 35 100.0 32 ................................... TATTGGGAACAGCAAGAACCATAAAAATGCAC 539726 35 100.0 31 ................................... TAAATATCTACACGCTCTAAGTACTGCTTTA 539792 35 100.0 31 ................................... TTATTTTCAGTTCAAATTTGCTTAATACCTT 539858 35 100.0 32 ................................... TTTAGCGAACTTGGTAGTAAGACTAATAGACT 539925 35 100.0 31 ................................... TAATTCAAAGATGATAACCGTAAAAAATGAG 539991 35 100.0 31 ................................... TATTAACTTTTGTTATGCTGTGAAAACCGTA 540057 35 100.0 32 ................................... TTCTTAACCTTTCAGTTAATTCTGCAATTTTA 540124 35 100.0 31 ................................... TATTTATAATAATTTTCATGCGTAAATTCCT 540190 35 100.0 31 ................................... TTGATAGTATTGTGACATCAATCATGTAATC 540256 35 100.0 31 ................................... TTCATTTTGATTATATACTTGCTTCGGCATA 540322 35 100.0 31 ................................... TTAATGATAATAACGATTATGATCTAGTTGT 540388 35 100.0 31 ................................... TTCAGCCAGAATTGTTTTTTAGTCAATCAGT 540454 35 97.1 31 ..............T.................... TCCAGCCAGCATTACTTTTTAGTCAATCAGT 540520 35 100.0 31 ................................... TTGATAAAACCAGTGCAAAATTGATTGGATA 540586 35 100.0 31 ................................... TTCGAAGTTTTCAAAATAAATCGCTCTGCCA 540652 35 100.0 31 ................................... TGGTCACTATAAATAACTTCAATAAAATTTT 540718 35 100.0 32 ................................... TACGAAGCTTTTAAAGAATTGAAATTGATAAA 540785 35 100.0 31 ................................... TCTTTTTCTCTTTTAGCATCGGAAAAAATAA 540851 35 100.0 31 ................................... TATAACTGTCTAAGTGGTGTTCATTAATATG 540917 35 100.0 31 ................................... TTTTCACACTTCTTGTATTGCAGGTGATTTA 540983 35 100.0 31 ................................... CAAAACCAGGCCACTATATTTTTATAAAAAT 541049 35 100.0 31 ................................... CCCAAAGGATTTACAACGGTTTTATATCCTA 541115 35 100.0 33 ................................... CTCTTAATTCTTTTAAACTGTCTGCTTTGTTGA 541183 35 100.0 31 ................................... CAATATATAACCTGGATCATTAACAGGTGAG 541249 35 100.0 31 ................................... CTTTTGCCACAAAACTACAGGAGCTTTTGTT 541315 35 100.0 31 ................................... CTTTTTCATTGCTACTCTAATTGGGTTTGCC 541381 35 100.0 32 ................................... CATTTAGGATTGTATTTTTGAACTGTCCCTAA 541448 35 97.1 16 .................................G. CTTTTGGTTGAAGCAA Deletion [541499] 541499 35 74.3 0 .......A..C.A.T.........T..A..A..TC | A,A [541503,541507] ========== ====== ====== ====== =================================== ================================= ================== 33 35 99.0 31 ACTTTTGGACTGTACAATTTTTATATAGAGTAAAG # Left flank : TTAACTTTAGCGTGCTTGAAAAAATTTGTGAAAATATTAACGAAAATATCGAAGAAGATTTTTTGAGAATCGAAAGCGACTTTAACAAAATGCTAAAAACATTTTTCAAAGTTAATGAAACTTCCTTACTGACAAGAGATCTATTTTTCAAATGGCTAGAAAACTACGACGAAGTTGGCCAAAAAGTAGTTATTCTTAAAAACCTCCCTTGGGTGAAAATAGAAGATCTGGTTCAGTATCTCGATAAATTTGTTTTTATAATACTAACCGATAATTTTTTTGATAATTGCATCAGGTTTGAAGCTTTAGAAACATGTGCTTTTTGAGAAAAAGGTAGACTTGTGTTAGTGCATAGTTTAAATGTAATTATTAACTGAATAGAAAAGAAAATTAATAAAAATATTGACTTGCAAGAGGAAATAAAAAACATATTTAATTCCACTTTTGATGGAGAAAAATTATTTTTTAACTTAAAGAGCGAAGTTTTCTCGTAAAATGGC # Right flank : CTAACTTTTTATATGTTCTTAAACTCATAATTGAAGGGTGATAAAAAACCTTTTATCTATGTTATTAGTAATCCAATCATTTGAGCAATTACAAAAATATGCCAAAAAGGGGCGAAATAGTAAAGCTCGTTTAAATTGCTTGCTTGAAACGAATTATTTGGAAACCTCAAAGTCTTTTAGTTCAATTTTGGGCCAAAAACTAATTGAACACAAAACAATTTCTTCAACTAATAAAAACGAAACTATTTCAATTTCTGAGCAAAAAGAAGATTTAATGTCGCTTAGCGATCTTAAATATAAAACGCTGATATAACAATCATTTCAACTAGTGGAGCTAAACCAATTGCTCTTAAATTACAAGCAGCTTACGATTATTTAGATTATGAGCCTTACAACCACAAAACCGAAGAATTTAAATTAAATACTAGCGTTGCTTGAGACTTTAATAAAATGAAAAAATTTCTTTTACTTCTAAAATAGCAACACATAAACAAGAAAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTTTTGGACTGTACAATTTTTATATAGAGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //