Array 1 3137654-3138017 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073011.1 Virgibacillus pantothenticus strain DSM 26 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 3137654 32 100.0 35 ................................ GTTACATTCCTGTATTGCTTTATTAAGTGTTATAT 3137721 32 100.0 34 ................................ GAGAAACGTCAATTACGATTCGCTCTCCACTGTC 3137787 32 100.0 35 ................................ GTTACATTCCTGTATTGCTTTATTAAGTGTTATAT 3137854 32 100.0 34 ................................ GAGAAACGTCAATTACGATTCGCTCTCCACTGTC 3137920 32 100.0 34 ................................ GTGTATTATTTTATTTTTATCGTCTATCTCAACA 3137986 32 90.6 0 .......................A..A....C | ========== ====== ====== ====== ================================ =================================== ================== 6 32 98.4 35 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : GTTAGAAGTTATTATAAAACATCTTTACTAAATTGTAAATAGTAATGATTACGATTTATGAATTAAATTCCTTAATTTACTTTGAACTTAATTATTTATTTTTTCGATAAATATAGCAGTATTTTTACTTAAATTTTCCGTTTATACTGCTGGAGTAATTTAATTTTACTTTTAGTTTACAGATTACCCTGTGAATGAAATGAAATACCAATTATGCATTTCGCCACTAATTGTCGAAATATTTTAAGATTCTTCCACTTGTACGGTTGATTTTCGTTAATAAATGACAAACCATCTGCACTATCATATAATAATTGTATAAAAGCTGGAGTATTAAACTTGGTGCGAACCTGAAGTGCACATAAAAACCCTAGGGGATTCGCACCTTAACTTAGTTGCTTTATGTAAATATATGGAATAAAATAAAGGGGAAATAAGATTTTTTTCCTAAAAGCAATATATTTTTGACTACTTTTGTAAACTTTTAGGTAAAAATCGCT # Right flank : CGCACTTATTGTTTAGCAGACCCTTGCAAATCGAGTAGAGGGAAAAGCTAGATAACTTTTCTCCCCTCTCACACCACCAGTATATACGGTTCCGTATACGGTGGTTTCATTTGGGATCAGTTTAAGCACTCTTGGGTCTTTGATCTTCTGACTCAATGTGCGCATTAATCTGTCGTGATGTACTTTATCGAAGAACTTCTCTAAATCCATATCGATAACCCAACGATAGCCATCTTTTATATAGCTTCTCGCTTTCCTGACCGCGTCATGTCCTCGTCTATTCGGGCGGAAACTATAACTGTGTTCAGAGAATGTTGGGTCATAGATGGTTGTTAGAACTTGTGCGATTGCTTGTTGGAGGAATCGGTCTAACACGGTAGGAATTCCTAGCTTCCTCATTCCGCCGTTTGGTTTCGGGATTTCGACACGACGAACGAGTTGAGGATAGTAGGTACCTCCTTCGAGTTGTCCTCGAATGGAAGCCCAGTGTTCCATGATAT # Questionable array : NO Score: 8.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3146207-3146440 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073011.1 Virgibacillus pantothenticus strain DSM 26 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 3146207 33 100.0 34 ................................. TAAATCTGCAAAGCTTAAATCTGTACATCTTAAA 3146274 33 100.0 34 ................................. AAAGAAGAACAGGAAAAAGAAACAGGAAACTATA 3146341 33 100.0 35 ................................. GCGTAGGCTGTATGAAAATATGGTGTTCGTCCATC 3146409 32 97.0 0 .............-................... | ========== ====== ====== ====== ================================= =================================== ================== 4 33 99.2 35 GTCGCACCTTATACTAGGTGCGTGGATTGAAAT # Left flank : AACTCGTTTTTGGGGTCTAACCATTATAAAACATCTTTACTAAATTTAAATATAGCAGTATTTTGCTTAAATTTGTAGTTCATAGATGCTGTAGTAATTTAATTTTACTTTTCAATTTACAGATCACCCTGTGAATGAAATTGAAACACCAATTATGCATTTTGCTACTAATTGTCGAAATAATTTAATCTACAAAGAGGAAAACATCATTCTTTGATTTTATTTGCACATATTTTAAGATTCTTCCACTTGTACGATTGATTTTCGTTAATAAATGACAAACCATCTGCACTATCATATAATAATTGTATAAAAGCTAGAGTATTAAACTTGGTGCGAACCTGAAGTGCACATAAAAACCCTAGGGGATTCGCACCATTATTTATATTATTTTTGGCAAATATTGGAAAAACGAAGAGAAAACGTTCATTTTTTTAACTTTCCCTCTCTAAAACTGGAAGTTTTTTGTTATATTTGTAAAATTTTATGTTAAAATCGCA # Right flank : TGTCGCACTTATCGTTTAGTAAATCCTTGCAAATAAAATACAGCACCTCATTTTAAAAGAGGCGCTGTTAAACTGAAACAGGTATTCAGTTAAATTTCGTAAAATCACCCGCTAGAAAATATCTGGGGAAACGTCAAAATCTAAAACACAATATAGCCTAATATATTTGTACTTATCCTTACTATTATTCACTAGCTAACTCCCCCATACTCCTTACCTGAAATCCGGTTTAAATTCTCCAGTAACTGTTTGATGCCCATTGTTGCGCTCGTACTGTTCTACCCTTTCTAGTTCAAAGCGATCCATGATAGGAATGTCATTAACTGAAAATAGGTAGGAATCCTCTGCTGGTACATGCTCATACCATGCCCAATTTGGCACAACAAAATAGTCGCCTGCTTTCCAATCGAATCGCACACCATTTATAATGGTATAACCCGATCCTTTGTAAGCATGATAAATAGTAGAATGGGTATGACGCAGTGATTTTGTATTAAACT # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATACTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.88%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3205964-3206256 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073011.1 Virgibacillus pantothenticus strain DSM 26 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 3205964 32 100.0 32 ................................ TTATCTTTAAGGTTATTAACTTGTCTCTTAGC 3206028 32 100.0 33 ................................ TTGCTAAATCCAATAGTGCTAAAAGTATTTCTT 3206093 32 100.0 34 ................................ AGGCGAATTTTTACGAAGTGGACGCGAAGGATTT 3206159 32 100.0 34 ................................ AGCGTTTTCCTCATCCTGTGGTGTGTTTGCCTTT 3206225 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 5 32 100.0 34 GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Left flank : ATACAATTATATTGAAAATAAAGGATACACCATTGACAAGAGGTACGGTGAATTAATACCAATTCTTCCTAATGAAGAGCTAAAAAAAATCCTGCAATTGCAGGATAATCAACCATTGCTATTTTTAAAAGCCTTTACAGTGTTTGAAGATGGGAAGCCCTTTGAGTATTCTAAAGTATATTACCACCCGAAAAAATACTCCTTTAAATTCATCTCAGAAAAGAACCATTAACTAGGTAGTGATTCTTTTGTTGATTTTATCATAGTTAAGTGATCTTTATTTTAAACTGTCGTATAATAGAGGTGCATAATTAAAATTAGCTTATTTTTAGTGCGAACCTGAAGTGCACATGAAAACCCCGGGGGATTCGCACCTCTATTTAACCACTTTATGGGAATTTATGGAGTTAAAATAACGACTATTTAAGCATTATTATTGATTTTCTCTTTAAAACAAGCACTTTTATACGACTTTTGTAAATTTTTAGGAAGAAATCGCA # Right flank : TTTTAGCAGCAGAGTTTCGAAGGCTAAGTATAGGTGTGTGATTGGAAGAAAAAGAATCAACTGCTTTATCAAATAGTGGTAACACGGAAGTAATCTAACCATGCCAATAAAGTGAATCTTCAATCAGTGGAGGTTTACATTCGTTCCCCCACTGATTGTTAGTATGGTATGACCTAAAGGCCTCTGCACAAATCGAGTATTTAGGTGCTGCTGTTATCTCCCACAGATTATCCAACTCCTGAAGTGGGAGACTTAAAGCACCTTATGTACAGGATAAAAACAGAACTCTGTAAAACACTCAAAACATTAAGCGTTTAACATGTGATTCACCGAAAACTTTAATTTTTCTAACCCATCATATAATTTCTCTTTTGGACAACCTATATTCATTCTTAGAAATTTTTCAGTTTCTCCGTATACTTCACCAGACATAATACCTACCTTCCCTACATGAACCAAATAATCTTGAATCTTCTTATTACTTGCGTTTAGTTTGCTAG # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTGTATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 3210288-3210917 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP073011.1 Virgibacillus pantothenticus strain DSM 26 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3210288 32 100.0 35 ................................ TTGCCTATCCCTTACAAAATTAAATTTTAAATCAC 3210355 32 100.0 35 ................................ TTTGTTAGATTTATATAACGGAAAGTGGACGATAG 3210422 32 100.0 34 ................................ TTAACCATGTGCTTATTACACTTAACAAAGTGTT 3210488 32 100.0 35 ................................ TATTAAAGGGAAATAAACTATATTGTAGGCAAGGT 3210555 32 100.0 34 ................................ GTTATCGACCGAGCACTAGTCGACCAAGACATAA 3210621 32 100.0 34 ................................ TAGGAAGCTTATATCCTTTTTTGAGGTACTGCCG 3210687 32 100.0 36 ................................ GATACAAAAGGCGATAAGATCGCTGAAACAGTTACG 3210755 32 100.0 34 ................................ TGCATTTTCGGCTTTTGTGGGTAATTTAGGAGGG 3210821 32 100.0 33 ................................ ATCTCTGATTTTGACGACCTTGCGAACCGAAAA 3210886 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 100.0 35 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : CCTTTGCTAATGATCCAGAATTAGAACTTTGGTATAGAGAATTACCAAGCAATGGAGAGAAGGATTTGCATCGACTTAAAAAGATTTGGGATGTTTTTAAAGAGGAATAAAACAGGTGTAGAAAAATTTCTTCATTTAGACTTATGAGGAAATTTTCTATTGGAAGTTCATTCCAAAAAGAAGTTCAGAAAGTTTCCTAAGCTCAGGGTCATTCTTCGGGATTTATATAATACGCCAACTATAAATTTCCAAAGATAACAAAAACTTACATGACCGCCTTTGGGCATACATTAATTTGTTCTGTATAATAGTATTTTACATAATATACTTGGTGCGAACCCCAAGCGCACATAAAAACCCCGGGGGATTCGCACCAAAATTCACTTGTTTTTGTGGTAATATATGTAATATAATTCAACACAATTAGCATTATTTACGATTTCCAAGCTAAAAATATGCTGTTTTTTGATTGTTTTTGTTATTTTTAGGAAGAAATCGCA # Right flank : TATAACGGCGACCGGAATAACCTAACTCGTTTAAACGTCGCACCTTATATAGATACAACAAGCTCAGAAAAAATGAAATCGCTCGCACACACCCTATTGCTACCAAATCTCTAAAAGACATGAACCAAATAACCTAACGGAGGCGCGTATGTTTATTTATATCCTTATATCTTTAAGTATCATTATCCTAACCGTCATAATTAGCGTTCTTTGGCTAATTTCATGGTCAAAAAAGCCTGATGCAGATTACGTTTTAAAATTTATAGCTAAAAATCCGCAAAGATCTTCCTTAATAATTATAAAGAACGGAAAATCGCTCGCAAACGTTAACGCGAATGAACGAAAACCATTAGCTAGCACGGTAAAAATCATGATTGCCATTGAATTTTCCCAACAAGCGGCTAATGGTAGCATAAACCCAGACGAAAAAGTTCATCTTGATGATCTCGCTCGTTTTTACGTATCTCACACTGATGGAGGCGCGCATGAAAAATGGTTAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //