Array 1 384132-389802 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071502.1 Shewanella sedimentimangrovi strain FJAT-52962 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 384132 28 100.0 32 ............................ ATGTGCAGTGGCACCTTGTACAGCCGGCACAC 384192 28 100.0 33 ............................ AGCGCCACCAGACGGCCGCCATCACGCAAATGC 384253 28 100.0 32 ............................ ATTGCCAATGGCAGGGTGGCCGTTATTCCCGT 384313 28 100.0 32 ............................ CACGGCGGCAAAAATCACTATTAGCCCCTCGC 384373 28 100.0 32 ............................ TTGTTGCTGACATTCGCCTGCCCGCGTCCACA 384433 28 100.0 32 ............................ TGCTGTCATCTGCGGCGCCCCGGCATCATCCC 384493 28 100.0 32 ............................ GCGCAGATTCACCAGCGCCTGGGTCATATCAC 384553 28 100.0 32 ............................ TGCTCAGGCGTGAGACCGAACAATGTTTTCGC 384613 28 100.0 32 ............................ GGGGTGTAGCCAGGTGCGCCGTCGTTGTAGTC 384673 28 100.0 32 ............................ TGGAGTCCCGAACCGTCGCCGGTACCGTGCGC 384733 28 100.0 32 ............................ TCGGCCCGCTGCCTGACCGCGCAGGCGCGCTC 384793 28 100.0 32 ............................ ATTACGCCCCCTGTGGCCTGGTGACGGCCTGC 384853 28 100.0 32 ............................ CGGAAGCGCGCCAGGCGGGGGAAGGTGTTCCC 384913 28 100.0 32 ............................ GCACCGCCAAATGGTATCCGCCCAAGGCCGCC 384973 28 100.0 32 ............................ ATGCGCCGTTGGGGCCGTCGACTGTAGCCACC 385033 28 100.0 33 ............................ ATTGGTCGCCCGTTCAAGCTGGTGAAGATTGAA 385094 28 100.0 32 ............................ ATGATCATCACTCCCCATAAACTTTGATCGAG 385154 28 100.0 32 ............................ GTCAAACACGTCTTGGTCATTCATATCAACCC 385214 28 100.0 32 ............................ TCGGCCCGCTGCCTGACCGCGCAGGCGCGCTC 385274 28 100.0 32 ............................ TTCCCGCCCGGGGGCGTGACCAGGCGGCACAG 385334 28 100.0 32 ............................ TCGGCGCAAAATACGATGGCGTTAGTGATGAC 385394 28 96.4 32 A........................... CCTATGAAGAAAGCCTTATCGCCGGCGCTGTC 385454 28 100.0 32 ............................ AACAGCCAAAACCGTGTTGCTGTGGCCACTAT 385514 28 100.0 32 ............................ CCAGAAAATTACCACCTACTGCTGGGTAAATC 385574 28 100.0 32 ............................ AGAGCAAGATGCAAGGCGTATCAAAACGACAA 385634 28 100.0 32 ............................ AAAACTGAAAGTAACCGCCACTCCCATCTATC 385694 28 100.0 32 ............................ TTCTCGGATTCAAACTTGATGGCGTCCTCTTC 385754 28 100.0 32 ............................ AAAGAGGAAATGGATTCTGCTGTGGAGGGAGT 385814 28 100.0 32 ............................ TATCAGGGTGAGGTCTACAAGGCTATCTGTGA 385874 28 100.0 32 ............................ TGAGCCAGTAGGAGCCGCTATGCAGGTCTTAC 385934 28 100.0 32 ............................ TGGCAGGACGGGGAACGGGTGGAAGTGGCACA 385994 28 100.0 32 ............................ ATATTGGCGGCGAAATTGGCGTAAGTGGTCAC 386054 28 100.0 32 ............................ TGCAACCGGAGCAAACTCAGTTGACAGATCGT 386114 28 100.0 32 ............................ GGACAGCTTTTGATGTTTATGTAGGTGATGAC 386174 28 100.0 32 ............................ ATAGCCCTCTACCAGGCACTTTTTCAGCACGT 386234 28 100.0 32 ............................ AGGTGATCGTTGCCCTGGTGGTAAATGCCGCC 386294 28 100.0 32 ............................ AGCAATCTCCCGCATCACGGCGTTATAGTAAC 386354 28 100.0 32 ............................ TGGCTACACCCCGGTCAAAGGCGTGGACTATT 386414 28 100.0 32 ............................ TGTGGTGCTGAAAGGTATCGCAGAGATCGCAT 386474 28 100.0 31 ............................ CACCCAGGCCGGTCACCGACAGCACATCACC 386533 28 100.0 32 ............................ AATCAGGGTTATAGCGGTAGTCGTTCAGAGAA 386593 28 100.0 32 ............................ CACAACCGGCGCATGCTTGGCAATCAACTTGT 386653 28 100.0 32 ............................ TCACTCAACTGGCTCCAGCCTATGCCCAGCTC 386713 28 100.0 32 ............................ GTCATCATTGGTTGGGTGGCCCATGGTAGACA 386773 28 100.0 32 ............................ AACCCGGCCCGCAGCTTTGGCGGCATACTGGC 386833 28 100.0 32 ............................ ATCAAGCTTAACCTGGCTCTTGTTCACTGTGG 386893 28 100.0 32 ............................ AGATGCGCTTTGCAGTGTGGCGCGGTTGATGC 386953 28 100.0 32 ............................ AGAATGGTGCCGCTGCCGGGGGCGCGGGCGAC 387013 28 100.0 32 ............................ CCCAACTTGCGCGAACTCGCGCAATTCATCCA 387073 28 100.0 32 ............................ GCTGAGGGTATAGGCGCAATAGCGGCCCTCCT 387133 28 100.0 32 ............................ TATTATCGCGCCAAAGTGCCGGGACTGTTGAA 387193 28 100.0 32 ............................ CTGGGGCGCTCGGCCGGGCGCTTGCGGTTCAG 387253 28 100.0 32 ............................ GCCTGGTCGTGTCGGACTTCCTGAACGTAGAC 387313 28 100.0 32 ............................ AACTCGCCCACGGCCTTGTGCCCGCGCTCGGC 387373 28 100.0 32 ............................ TTCAGAACTGCTAGACCTAATAAAAGCCGCAT 387433 28 100.0 32 ............................ CTGAAATGGTGTGTCGTCAGCAAATGCCTGGG 387493 28 100.0 32 ............................ TCGCCAGAGTGCATTATCTTTACTGCGTCATT 387553 28 100.0 32 ............................ AGGAGCCGATAAGCGGGATTAACGTTGATTTC 387613 28 100.0 32 ............................ TCAAGAGGCTTTGTTATGTGCCTGGTGAATGT 387673 28 100.0 32 ............................ TCACAATGGCCAAGTGCGGGGCCACCGCATCA 387733 28 100.0 33 ............................ AGGGATGTGGCGGTGCTGGTGGCCATGTTCCAC 387794 28 100.0 32 ............................ ATTCCCATCGCCTGCCTCGCTCTAGCAATTGT 387854 28 100.0 32 ............................ TTTGCCGGCAAGTCGCCAGGGCTTGTTGTGAT 387914 28 100.0 32 ............................ CCTGCGACGAAAGCGACAGAAAAGACAACCGC 387974 28 100.0 32 ............................ AGGTGAACCCCAGCAAAATAACTACGACCAGA 388034 28 100.0 32 ............................ GGCATGCGCGGAAGCTTTGACACTTTTAATGG 388094 28 100.0 32 ............................ TGCGAATAGTCGTTAGATAAAGTGCGAAAACG 388154 28 100.0 32 ............................ AAGCTGACTGGTCGCATTGTGAAGGTTGGTTC 388214 28 100.0 32 ............................ GGCTACCAGTAGCGCCCTTGGGAGCGTGGGCG 388274 28 100.0 32 ............................ TGGGGCGCGCCGGTCACGCGGACCATGATTGA 388334 28 100.0 32 ............................ TTGGGGTAGTCAGCAGCGCCCAGGGGCTTGTC 388394 28 100.0 32 ............................ CTGATTGGTTCACAGGCTTTCCTGTGGCGCTT 388454 28 100.0 32 ............................ GGAAAAGGTTTTACCGGTGCCGGTGCCGTTGG 388514 28 100.0 32 ............................ AGATGCCAGTGGGGCGTGTTGCCGCCAGGCCC 388574 28 100.0 32 ............................ TGGCGGAACTGTTTTCGATTGACGAATACATA 388634 28 100.0 33 ............................ AATGTTGCGTAGTCTTTGGTACGCCTGCTGGTC 388695 28 100.0 32 ............................ TGGGAGCCAGCGTACAAGACGCCAAAACGTCC 388755 28 96.4 32 ......A..................... AGCATGATGGGCTTGCTGGCGGCATAGGTGGC 388815 28 100.0 32 ............................ TGGGCGTGGCGATGCAGGTTGGCAGCCTGTTC 388875 28 100.0 32 ............................ GGCGTGATAGCCAGCATGCACGAACATGGGCA 388935 28 100.0 32 ............................ TGTTCGCGGTCAATAGTCGGGTGATCAGTAAA 388995 28 100.0 32 ............................ ATGTACAGTGCAAGCTCGCGCTCTGTCATGCC 389055 28 100.0 32 ............................ AAAGGTTCGCTTTCAGTGTCCTCAACCACACC 389115 28 100.0 32 ............................ ACGCAATCCATACCGTTTGCATCTGCTTTAAA 389175 28 100.0 32 ............................ GCAACCTTTGCATTTGTCAGTCATAGCTCGGT 389235 28 100.0 32 ............................ TTGGGAATTTTGATCAGCGACTTATCGGCAGG 389295 28 100.0 32 ............................ AAACGTGGAGAAAGGTCGAAAAGGAAACAGTC 389355 28 100.0 32 ............................ CTGAATGCGCGGCACCAATACAGATTTCACGG 389415 28 96.4 32 ......................A..... GCAACCCTGGCAAGGAGAACACAACACATGGA 389475 28 100.0 32 ............................ ATGGATAGACAGGTTTGCCGAATTGGCCGCAC 389535 28 100.0 32 ............................ TGGCGTCAACATTCAGTTGTGTAACTCAACAA 389595 28 100.0 32 ............................ ATTATGGGAACAATGTTTCCAGGACTCGTTGT 389655 28 100.0 32 ............................ CGGCCCGTTACTTTGCTTCCATTTGTCCCTAT 389715 28 100.0 32 ............................ AACAGCATGGCGTGATAAGGACGTAACCCAAG 389775 28 92.9 0 ......................A.A... | ========== ====== ====== ====== ============================ ================================= ================== 95 28 99.8 32 GCTCACTGCCGCACAGGCAGCTGAGAAA # Left flank : GTCGGACTTGCTCAATCTCACCGAAGTGAACTGGCTCCAAGGCATGCGAGATTATATCCGGCTGGGCGAACCAACCAAGATCCCGGCAGAGGTAAGCTACCGCACCGTACACCGGGTCCAGGCCAAGAGTGCGCACAATAAACGTAAGCGCTCAGTCGCCAAGGGATGGCTGACCGAAGAAGAAGCCTTGGTTCGTATTCCTGACACGCAAAGGAAAATCCTGAAACTGCCTTATGCAGAGATGCACAGCATGTCGACAGGCAGCAGAATGCGGCTTTATGTGGAGCTCGGTCCTTTGGTGGAAGTGCCCGTTGCCGGCTGCTTCAGTGCTTACGGATTGAGTGCAGCAGCAACCATACCTTGGTTTTAACCCAACTTGGACAGGCACAGCTAACTATTTGATTTTAAATGGTGGTTGGTTGTGCCCTGTTTTTATGGGATAGCGCAGTGATTGCGCTATTGTTCTTTAAAAATCAGCCAAATAGAAGTATTCTCTAACA # Right flank : AGCGACGACTATTTGCTTAAGTAATATCGCTTTAAGACTGATAGCTGGTAATTCGATAATCTTCCGGTAAATAACACCCGTTAAAAGCAAATGCCCATTAGTTATCAGTTGTCTATTGGTATTACTGCATGATCATGGGAAAGGTCCACTTTCAGCAACGCTGCCTGCAGCTCTCGTCCCATCGTATTTTTCCAACAGAAACTGTTGCAATAATGTTAACCGTTTCATCGTTTCAGTGAAAATGACACCTAACGATGCTGTGTGTGGTTGGTCACCTCCTAGTCTGTGCATTTAAATTCAATCAGTTATATTCTTATCGGTAGCCTGTGGCAGGCTTGAGTGATCAAAAAATGCGACTGATCAAAAAATGTTCAGTGTTTTTGATCAGCAGTGATCAATGGTTTTCGGAGTCTATTGGCCATGGCTGCTGAAAGTGATTTTCAGCGGGTTTCAGTTTCGCCGTTATACCATGGTGGCGCTATCTCCAATGCCAGGGGAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCACTGCCGCACAGGCAGCTGAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //