Array 1 33099-32582 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEHX01000017.1 Sutterella seckii strain ASD393 NODE_17_length_33239_cov_105.788835, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 33098 28 100.0 33 ............................ CGACCGCACGGGCCGTTGCTTTCCACTGCGAGA 33037 28 100.0 33 ............................ CCCCAACGTCATCAAGAGGTGGGCTGTGGCCCT 32976 28 100.0 34 ............................ CGGCACAGAGTTTTCGATCCTCATGGATATTGCG 32914 28 100.0 33 ............................ TGCGGAGCCGCTAGTGTGCTCGGACTCCCACGG 32853 28 100.0 33 ............................ CGGAAATATGTTATCACAGTAACATTAGCCCGA 32792 28 100.0 33 ............................ CAACCCACCAGTCATTGACGCCGTTTGCGCGGC 32731 28 100.0 33 ............................ CCGGAGCATCGCGGCTCCGTTCTTCGTTTCGTA 32670 28 100.0 33 ............................ TGAGAGTACAAAGTGTGGACGTGCGGCGCCATG 32609 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 9 28 100.0 33 GTCTTCCCCGCCTCGGCGGGGGTGTTTC # Left flank : TACCCTACACAGAAAGAAAAAGCAAGTGGGTTTCAATGAAATCTTTAAAGGATTTCAACTACTTGCTTTCTCTCGACCGTCGTTATACCAAGACCGAGAGCGAGATTTTCCGATCAATGGGAAGTGGCCGACCTTCGTAA # Right flank : CGTCTTATTGATTTTGTGATGAATTACTTTTTTGACGAGTCACATTATGAGATTATTTAAAGTTCCTAAAAATTTATTTCCACAGGTTAAAAATCGCTTCCCATTCGTATATCTTGAGCATGGGAGAATAGAAATTGATGACAGCAGCGTAAAATGGATTGATAAAACCGGTTCTGTCGTCAGGTTGCCTGTCGCGACAATCGGAAGCCTTTTTATCGGTCCGGGAACATCTATCACTCATGCGGCAATCGGCGCAATAAGCGAGGCTTCCTGCACAATATGCTGGATAGGTGAAGATAGTTTGAAATTTTATGCTTATGCAGAACCGCCCACTGCAGATACCCAAACGTTATATAAGCAATTGAGGCTGGCTTTTAATGACGAATCAAGAGTGGAAGTCGCACGAAAAATGTTTGCCAGAAGATTCCCGGATGCTGATTTGAAAGGGAAAACCCTGCAGATGATGATGGGCATGGAGGGGCGGCGCGTCAAAGGTTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTCGGCGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCCGACGCGGGGGTGTTCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.90,-14.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 7333-8213 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEHX01000100.1 Sutterella seckii strain ASD393 NODE_100_length_8323_cov_325.496352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7333 28 100.0 33 ............................ TAAGGCCGACCGGCTTTTGAGTTGGGTGGATTC 7394 28 100.0 33 ............................ TAAGGCCGACCGGCTTTTGAGTTGGGTGGATTC 7455 28 100.0 33 ............................ CGGACGCTTTGATCGAAAGTGAACCGTCATAAA 7516 28 100.0 33 ............................ TCGATCGCACTGGCGAGGCCCTTCGCCCACTCT 7577 28 100.0 33 ............................ TTCAGCATTTTTTTCTCCTTTCTGTCACTTGAG 7638 28 100.0 33 ............................ GAATTGAATCTGGTTCCTTGACGAAACACCTAA 7699 28 92.9 33 ......................G.G... TGTAGCCACTGATGTTCGGGCATAAAAAGAGCA 7760 28 100.0 33 ............................ TCTCAAAGAGCTCGGCGGTACGAAGGTACGTCG 7821 28 100.0 32 ............................ TCATAACGGCGTGTACTTCGACGCGTCCTTCG 7881 28 100.0 33 ............................ CCGCTCAAGTCAAAGACACGGGCCCGGCGATGC 7942 28 100.0 33 ............................ TGAAAATTAGCGAAAGAAATAAGGATTGGTTTG 8003 28 100.0 33 ............................ CAGGGCGAAGAACGTCGAGGCGCGCATGTAGAC 8064 28 100.0 33 ............................ TTTCATGCATTACTTTAGCTTTTACTTGAACAA 8125 28 100.0 33 ............................ CAGCTTCTTCAACGAGTTTTGAATGCGGAGAAA 8186 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 15 28 99.5 33 GTCTTCCCCGCCTCGGCGGGGGTGTTTC # Left flank : CGAGTGCATCCCGAAGACATCTGAAGGGAAAAAGGCCGTCGGTGGAGGCACTCGCCTTACACGACGAGAATATCTACAGGATGGGCGATTCGCAGTTTTGCTGACCATACCTTCTAGTTGGAAAGAAAAAGTCCGGGAAGGACTTGAATCGCCGGTCTGGGATATCTATCTCGGCAGAAAATCTTGTGCACCGGCAGTCCCAGTTTTTGGAGGACTTTTTGCAGATGAGTCATCTGCAAAACAGGCCTTGGAGCGGGAACTTGCGCAGCGAGCTGATGATGGTGAAAGCGCCCCATGGGCAGTGCTTGAGGTACAGCAGGAGACCTCTGAGTCGGATCCTTTGGGCGAAAGCGTTCCTGATGTGCCAATCTGCTTTGGGCCAACTAAGCAATACACCACGCGCAGAGTGAAAGTAGTGTCCCTCATTTAGGGTTTACCCTAATATCTTGTTCTTTAACAATTTATAGTATTATTTTAACAAACAGCTACCATATGTTGCT # Right flank : TCAGCATCAATCGGAAAATCTCGGCTTGGTTGGGGTATAACTCCCCAACCAGGGGTCAAGCCAGCCTCATCAAGGGCTTGAGAGCGGCTTCAGGAGAATCGTAGAGTCCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCCTCGGCGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCCGACGCGGGGGTGTTCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //