Array 1 23706-23497 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAVY01000110.1 Corallococcus sp. CA054B NODE_110_32964_cov_17.256_ID_9410, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23705 29 86.2 31 .....C...ACC................. AGCGACGGTGAAGGCCGAGCGCGGACGCTCC 23645 29 100.0 31 ............................. CGAGACCGTGAAGGCCGAGCGCGGCGCGAAG 23585 29 86.2 31 .....C............AAG........ CGATCGCGTCAAGGCCACCCGCGGTCCGAAC 23525 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 4 29 93.1 31 TTCTATGAGGAGATCGGCCGCAAGGGCGG # Left flank : CCAACAGCCGGAGCATCACCAGACCGCCAATGGAGACGACCATGGGCGCGAGGATCCGCAACCAGGTCTTCAGCCCACTCCTGACGCTCGCCAAGAAACCCTCCCCCACACCCGCCAGACCGATGTGTCAGGCGTTGCGCACAAGGTGGGATCCGAGCAGGGAATCGGCAACGTGGGCTGAACTGTTGTGAACAACGAGAGCGTCCTGCCGGGCAATCACCCGTCCCGTCCGGATGCCCAGCAGGCCTGACAAGCGCGCGAAATCCTTGGGGATTATGCATGCAATGTCAGGAGAGAACGGCTGGCGGTGTACGGAGCTTGCTTGCATCGGGGCGCTTCCGTCCCAAGGTTTCAGGCAAGGGACACCAAGGCGCGGACGGGGTTGGGCAGTCACGAGAGGAGACACGGACATGTCGGACAAGGACAACAAGGGCAGCATGACGGTGGCTGAGGCCGGGCGTAAGGGCGGCGAGACGGTCCGCAACGAGCGCGGTCGCGAG # Right flank : GCAGAAGGTCAAGAAGCTGATTGAAGAGGGCAAGCGCGCCGCCCGCGCCGCCATGGAGAGCCAGGCCGGGACTGCCCCCGCGTCCGAGGGCACCTCCGCTCCGGCGGCGACGCCGGAAGAGCCCGCGCAGCCGGGCGGCAACGAGTAACGTGGGACAGGAAGCGCGGTCTTCCGGTATGACGGCCGCGTGTACCTGGTCATCACGTTCCTCGAACAGGTGGAGACGACCGAGCGGGCGATCCGCCGGCTCCGGGAGTTCGGCATCCCGGAACCCATGGTCATCCGAGCGCGCAGCGCCGCCGCGGCCCTGTCCGCGGAGGTCCCGGTGTTCGCCGGGCTGCGCAGCCTCGCGCTCGGCGCGGATGAGGACCGCATCATCCTGGTGAGCGTGCTGCCGGCCCTCCCGCAGGAGGAGCTGGATCGCATGCTCCAGCGCGTGCAGCTGGAGATGGACGCGGACGACCCACCCATGGGTCGCTTGGTGGCCCTGCCCGTCCTGG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTATGAGGAGATCGGCCGCAAGGGCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 17397-17837 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAVY01000005.1 Corallococcus sp. CA054B NODE_5_108148_cov_19.9122_ID_9194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 17397 24 100.0 47 ........................ AGGACCGTGGCAGGCCCCCCGCGCTGCCCCGGGGCAGCTGGAAAACC 17468 24 100.0 45 ........................ AGGACCTCAGCTGGAAGCTCCTGTTCCATCCCGACGGCGGAGGCC 17537 24 100.0 46 ........................ AGGACCGTGACCGGGTCCTCGGCGCTGGCTCCTGGGAGCGGAAACC 17607 24 87.5 42 ................C....TA. GGGACCAGGCGGAACCCGTGATGACTCCAGTTGGCGGCGACC C [17626] 17674 24 100.0 46 ........................ GGGCCTTGGCGGGGCTCCCGGGCTTTGGCTCCGGACTGCGGAAACT 17744 24 100.0 46 ........................ GGACCTTGGCGGGGCTCCCGGGCTTTGGCTGCGGACCTTGGAAACT 17814 24 91.7 0 ....C................T.. | ========== ====== ====== ====== ======================== =============================================== ================== 7 24 97.0 46 TGTCGGACAGTCGGACAGGTTGGG # Left flank : GCCCTGCCGAGACCGGATGCGCTGTTCGCGCTGGGGCTGGATGGGCCCTGGTACGCGTCTGTGCATTCGGCCTCCGCGAAGCTGGCCCCGGACGGGGGCGCGATGGTGCACGTGGCGAAGTACCTGGGCGGCGCGGACACGGAGGCGAGCGAAGCGGCGCTGGAGGCCGTGATGGACGCGCTCCAGCCAGGATGGCGCGCGAAGGTGGTGGCGCGGCGCTACCGGCCCTCGCTCGCCGTCAGCGCCGGGTTGCCCCGGGCCGTGAACGGCGGGCTGACCGGACGCCCCGCCGTGGAGGTCCCGCACGTGGGCGGACTGTTCCGGGTCGGCGACTGGGTGGGCGCGGAGGGCATGCTCGCGGACGCATCCCTGGCGAGCGCCGAGGCCGTGGAGCAAGCCCTGGTGCGACGCACCGAGACGTTCCAGCGCCACGCGGCGGGAGCTTGAGGCCGATGGGATACAGGCCAGGAGCCCCTCCCCTGCGCCGCAGAGCAAAAACG # Right flank : GCTTGGTCCGGGCCCGGAGGGGCACGGCTTGGAGGTTCGGGGGATTGGGGTACCCACCATTGCGGTGCTCCAGTGATGCTCCTGGATTCTTGGAACGTGAGGGCTTGACCGGGATGGATTCACAGGCGCGAGGAGCACTGGGGCAGGCCGCACGCGAGCACGAGCGCTTCCTCTGGGGGCTCTGCTACCGGATGACCGGCGTGGCGGCGGATGCGGATGACCTGGTGCAGGACGTCTATGCGCGCGCGCTCGCGACGCCTCCGGAGCGTCTGGACACCCTGCGCCCCTGGTTGACCCGCGTGGCGGTGAACCTGGCGCGAGACCACCTGCGCCGCCGCCGCCGCGAGGGCTACGTCGGTCCCTGGCTGCCTTCGCCGGTGGAGACGGGCGACGAGGAAGTCCTACCCGCTGTGGAGGCACGCCTTCCGGGCGGCGGCTCGACGGAGGGGCGCTACGAACTGCTGGAGAGCGTGTCCTTCGCCTTCCTGCTGGCGCTGGAG # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCGGACAGTCGGACAGGTTGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //