Array 1 347519-346948 **** Predicted by CRISPRDetect 2.4 *** >NC_015556.1 Pseudomonas fulva 12-X, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 347518 27 89.3 32 T.........-.A............... AAGATGAACGGCATGCCGGTGATGCAGGTGTT C,G,GT [347501,347512,347514] 347455 28 100.0 32 ............................ ATGACGGCATGGGTGGCCTGGCTGGCATGCAG 347395 28 100.0 32 ............................ ACCCTGGCCAGGGTTCAGCTTGTTGGTACCGC 347335 28 100.0 32 ............................ TTGGATTACTCGGATTACGCCTACGGTTCCGA 347275 28 100.0 32 ............................ TGGCCGAGCGCTTTGCCGCCCAGGAAGAGGCG 347215 28 100.0 32 ............................ TGCTCGCCCACATGGGCCTCCAGCCAAGGCCG 347155 28 100.0 32 ............................ AGGCGCCGGCCGATGCCCCACACCTCGCCCAC 347095 28 96.4 32 ............A............... GTACATCCTGCGGGCGTGGCGGTGCCGGAGGG 347035 28 96.4 32 ............A............... TGCCTAGACCTGCCCGTGACGAAAGGCGCCAC 346975 28 78.6 0 ...........CA........C.C..GT | ========== ====== ====== ====== ============================ ================================ ================== 10 28 96.1 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : CCTACTACGGCAGTACCTTCAACCCGGCACGCCTCAATCGAAGCGTTCTGGAAACCAATATGCCGGTGCGCTTCTGGCGCAACCTGCCCGAAGGCCCACTGATTCCCCGTTTGATGAGCCAGGCTAGAGCAGGCGCCCAGGTCGATGGCCAGGCTGAGGCAGTCGCCGCTCGGCCGGGCAAACGCATTCAGGCGGATGCGGAGAAAGTGCTGCCTGTGCGGCAGTGAACCGGGCAAAAGAAACCCTGGCAGTGTCTCCGATTTATGAGCTGCCTATACGGCAGTGAACGCATTCGCCGGCGCACTGCTCTTCGCCTTCATTTTCTGAGCTGCCTATACGGCAGTGAACCCTCGGCCGGGATCGAGGTGAACCATGGCAAATTTCTGAGCTGCCTATACGGCAGTGAACAACATCGAGTTGTGCCGCATACGTTTCGTGTCTTTCTGAGCTGCCTATACGGCAGTGAACGCTGCTGCCATGGCTGACGCACCGACCGTGCT # Right flank : CACCAACAAAAAACCCGCCGAAGCGGGTTTCGTTCTATACGAGCAACGACAGGCTTAACGAAACCGCCGCCCCTGATCTTCGTCGCTGATCTCCAAGGCCAGACCCTGGGACATGCTGGTCAGGTGTTCGCCGTCGGTTTCCGAGCCGAGCTTGATCATCAGACGCAGGTCGTTGGCCGAGTCAGCGTACAGCAGGGCATCTTCGTAGGTGATCTCGCCCTGGCTGTAGAGGTTGTAAAGCGCCTGGTCGAAGGTCTGCATGCCGTGCTCGGTGGAGCGCTTCATCAGGCCCTTGAGCTCGTGCACCTCACCCTTGCGGATCAGGTCGGCGGCCAGCGGGGTGTTGATCAGCACCTCGATCACGGCGCGGCGGCCCTTGCCGTCGGGCGTGGGGATCAGTTGCTGGGCGACGATGGCCTTGAGGTTCAGCGACAGGTCCATCCACACCTGGTTCTGCCGGTCCGCCGGGAAGAAGTTGATGATCCGGTCCAGCGCCTGGT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //