Array 1 3720-2175 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFEO01000130.1 Klebsiella pneumoniae strain TUM14381, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3719 28 96.6 32 ..........-.................. TCCGGATGATGACATTTCGGGTGATAATCATA 3659 28 96.6 33 ..........-.................. GGGGCCAGCTCCCGGACGAGAAATGTGACGCCC 3598 28 96.6 32 ..........-.................. ATTCCGTTCATAATTTTGTAGCTGCCCGCTAT 3538 29 100.0 32 ............................. TTCTCTCCGCCGGGCAGTGTGATGCCGGAGGG 3477 29 100.0 32 ............................. GCAGCGGCCTGACGATGATCGATATGAACGGC 3416 29 93.1 32 .............A...A........... TGAAATTGACGAGTGGATCAATCAGCGTATTG 3355 28 89.7 32 ..........-.TA............... TCACTTTTGCGTCGAGCCAAGTTATTATCTCA 3295 29 93.1 32 ............TG............... TAATTTAGGAAATGAATTCTAAAATTGAATCT 3234 28 93.1 32 ..........-..A............... TGAGGCTGCTGACGGAGAATTGGGACCTGTTC 3174 29 100.0 32 ............................. TAAGCTGATCGTTGCCGTAATGCGAAGCGGGA 3113 29 96.6 32 ...............T............. TGACTTTTGTGAAATTTTTTTCTTAAAAAACT 3052 28 82.8 32 ..........A..AC.T....-....... TTAATGTTTTGTTAATTTATAAGTGTGGTGAA 2992 29 93.1 32 .........T...C............... CGTTCGGCTAGGGCGTTGACGGACGCATTTTC 2931 28 86.2 32 ...C......-..AC.............. CGGTAACGCAAATGTGATCCGATGTCGTCAGG 2871 29 100.0 32 ............................. AACAGTGGGATTTCACCTTTTAGGTTGAGTCA 2810 29 93.1 32 ............TC............... TGACTTTTGATGAGATTTTGTCGATAAAAATT 2749 29 89.7 32 .............G.A............T TCGATGGCAACCACCAGGAACAATAGAACCCT 2688 29 86.2 32 .A......T...TC............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 2627 29 96.6 32 .............A............... TCGAAGGCAACCACCAGGAACAATAAAACCCC 2566 29 89.7 32 .A..........TG............... CCGACCCGGTGCCCAGGAGAACTGGCTGAATA 2505 28 89.7 31 ..........-..G.A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 2446 29 93.1 32 .............A............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 2385 29 93.1 32 ............TC............... TTACGCATTGTGATCAGGATTCGCTTCAGACG 2324 29 93.1 32 ............TA............... TCGCCCAGTCCAAAGGGGATGATGCAGGATTG 2263 29 100.0 32 ............................. GGCATGAGCGCGAACCACTGCGAGAGTGTGGT 2202 28 86.2 0 ..........A..A.........-....A | ========== ====== ====== ====== ============================= ================================= ================== 26 29 93.4 32 GTATTCCCCCCGCTTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTACGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTACATTAATCCGCTTTGCAGCCGAGCCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTGAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGTGCTATTTATTATTTTATAATCAACCGGTTATTTTTAGA # Right flank : CATAGAAACCGCAATGGTGGGGCTTTTGTCATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCCTGGATAACCCACTTTCTGCCATCTTTTGTCTCAAAGGGTACTCCCACCGTGGCAGGTGGGAGGGGAATTTGAATTGACGCGCTAGCGTTAAAGGAACATTTAGCCGTGCTGGTGCTGAATGTAGCGCTTTACGACTTCCAGCGGTGCTCCACCACATGACCCAACAAAGTAGCTGCGTGACCAGAGAACAGGCTTATTGTACGCCTCCCGCAAATCCAGAAATTCATTCCGTAGCCGCCGACTTGTGACGGCTTTCAGGCTGTTAACCAGTTTTGACAGTTGCACAGTTGGTGGGTATTCGACCAGCATGTGAACATGATCGGCTTTTCCGTCACATTCATTCAGCTCAGCACCAAAATCACCGCAAACTTCACCTGCATACTGATTTACTTTTTCCAGATGTAACTCACCGAAAAC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGCTTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //