Array 1 246031-243482 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDIE01000059.1 Vibrio sp. V09_P4A23P171 V09_P4A23P171_contig000022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 246030 28 100.0 32 ............................ AGTGCAGGTTTATTCCCATCATTGGGATGATG 245970 28 100.0 32 ............................ GCTGCACCCGGAAAGCTACCAATGAAGTTCGC 245910 28 100.0 32 ............................ AAATGCACGTTCAATGGGCTTGGCTTGGCCGT 245850 28 100.0 32 ............................ GGAATAGCCGTAGCCGCATTAGTGCGAAGCAC 245790 28 100.0 32 ............................ CCACCGAAATACACCAAGGTTTACGCTGACGT 245730 28 100.0 32 ............................ CAGCGCGACCATTGAGGGGCTTACTCCTTGGT 245670 28 100.0 32 ............................ ATTACATCGCCTCTAGTTCAGCGATATAAACA 245610 28 100.0 32 ............................ AATCCGACTTGCGCGGCGTTCTTGCAGGGTTT 245550 28 100.0 32 ............................ TACAGAATTAGCGTGATTATAGTCGATTTGAT 245490 28 100.0 32 ............................ TTCACTCGTCAATAGCTGACTACTCTCAATCA 245430 28 100.0 32 ............................ GCCACAAAAGAGAGGTGGTATTGTGTCGCGCT 245370 28 100.0 32 ............................ ATGAATGCCGCAATGGGCGCGGATGAAGTCAT 245310 28 100.0 32 ............................ TTAACGCCCATGGCGGCCCCGTTGAGCGCATC 245250 28 96.4 32 ......C..................... AACAACATGGAAGAGTTTACCCCACCGAAATA 245190 28 100.0 32 ............................ AGCATCACGTATTCACGCCGGGTGTTCGCGTC 245130 28 100.0 32 ............................ GAGGCGAATAGGAACGTGACGGGGCAGCAATT 245070 28 100.0 32 ............................ ATAATTACGCATTCAATAGCGGGACAGTCGAA 245010 28 100.0 32 ............................ GGTTACCGCACCAGAGGGGTCGATCGATATGT 244950 28 100.0 32 ............................ GGTTACGTTCAATGTTAACTGAGTCGTGGACA 244890 28 100.0 32 ............................ TACATTAAAATCATAGTTACCGTCCGCCACGG 244830 28 100.0 32 ............................ ATCATGTCGTCTTCGGTATCTCCCCCCTCTTC 244770 28 100.0 32 ............................ ATACCCGCACCGCGAGTTGCTGCGGCGCTTGG 244710 28 100.0 32 ............................ ATAAAAAACATCCTCATCCTACCAAGCCGCTT 244650 28 100.0 32 ............................ AGTACCCGACTGCGCTTTTAGTCTGCTGACGC 244590 28 100.0 32 ............................ TATCGAGTGAAACCTTGTGATTTTGAAAAACC 244530 28 100.0 32 ............................ CATGAACAAAACAAACAGGAGTACTTCGAGTA 244470 28 100.0 32 ............................ GCAAACACGATCATTGCTCCCTACAACCCTAC 244410 28 100.0 32 ............................ GACACCGTACCCGCTCCAGCAACGACCGGACT 244350 28 100.0 32 ............................ CACAAGTAGTAAGTACCGGCTCGTTTAGTACG 244290 28 100.0 32 ............................ AGTCTGATTAATCCTGGTCTTACGCTTCATCG 244230 28 100.0 32 ............................ GCCAGCCGCTTTAGACATCGAAGCCACAAGCG 244170 28 100.0 32 ............................ TAGATGCAGCATCAGAGACAGTAGTACGAGTT 244110 28 100.0 32 ............................ TTCACGCGAGTTCTTCTTAATATCAAAATCTT 244050 28 100.0 32 ............................ TCGATTTCTAGTCCATCAAGCGCAAATAATTG 243990 28 100.0 32 ............................ ATCACTGGGAGTGGAGCACATTGATGAACAAC 243930 28 100.0 32 ............................ AAACATGCTCATCATGGATAGAGAACGCGGTT 243870 28 100.0 32 ............................ AGGCGAAGATATTAAAGATAATACCGAGGATG 243810 28 100.0 32 ............................ TCAATGAACACTTGACGTTGTGGCGTGTCCAC 243750 28 100.0 32 ............................ TGTCGTTACGGCCATACGCGAATGCGATTTCT 243690 28 100.0 33 ............................ CGTTCATCACGAAATCAACACCCATGCTCAGCA 243629 28 100.0 32 ............................ ACTTGATTGACCACCATTGGCCTGACTCTTTC 243569 28 100.0 32 ............................ ATAAGGTGCTTGTTTTTAAATCGACTTAAAGC 243509 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.9 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GATGTAACTTACGTCAGCTTTGCACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGAACTATGGGCCGCAAAATCTGGTAAACCGCTGGTGGAATGTCTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGATAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTTGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATAGTTGCAATAGGTGGGTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACAGCCTGTTGCAGCTTATTTTTATTGGTTTATTCTATT # Right flank : GCTAGTGATCAAATATGAGACGGATGGAGCTAGCGAAACACGCCAATCTGACCTAAGAAATAGGTATCTCTGCCTACTTTTTTGAGTTTGGAGTATGACAGAGAAAGAGAAGTACATTCACAAATAGTTAATTCATAAATAGTTAATATTTTTATAATTCTGATACCTATACAAATTAGGCTGTCAGCGATGTTGGCAGCCTAATGCACGATGAATGTTATTGACTAGCTAGTTGCACAAATGGAAAAGTTCCCTTTCGATGCCTCCTCGATATAGTTACTCCACCAGCGTAGCATTTCTCTACGTTGATTAAGATACAACGCCCGATTGTAAATACCTCGAACTTGATTTCTATCTACGTGAGCGAGAGCAAGCTCAATAACGTCATTATGGAAGAGTTTGGTTTCATTTAGCGTTGTACTAGCTAGAGCACGTAAACCATGAGACACCAAACGATCTTTAAAGCCCATACGTTTAAGGGCAATGTTAGCCGTTTGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //