Array 1 500934-502943 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134343.1 Moraxella cuniculi strain NCTC10297 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 500934 28 100.0 32 ............................ GAAGTGATCTGGTACTGGGATCTCATCCAGCC 500994 28 100.0 32 ............................ ATTCATTATCGCCATTTTTAGCCGTTTTAAGC 501054 28 100.0 32 ............................ ACTACCCCCTGATTGTGATTGGCGAGCATTAA 501114 28 100.0 32 ............................ AGCCATCACTTGGGCAAACCAGTTACGGTTAT 501174 28 100.0 32 ............................ ACCATAAGCTAAATATTCAACATCAAAATCAA 501234 28 100.0 32 ............................ TATCACCTTTATCACCTTTAGGGCCGGTTTCG 501294 28 100.0 32 ............................ TACCTTTGGCTATGTTCGCACTACAGAAGTAA 501354 28 100.0 32 ............................ TGTTCTTTCACAATGGATTTTTTCGCCAGCTC 501414 28 100.0 32 ............................ ATTAACTCCGTATCGCTGAAACAACAATGCCC 501474 28 100.0 32 ............................ TTTGTCAGAGCTTAGCTTTTGCTATCCTTAAG 501534 28 100.0 31 ............................ TAATAGCCCAGTGGTTAGCCACAACGCTACA 501593 28 100.0 32 ............................ ACACATTTCTACGTCTTCATATAAGCGGGCTA 501653 28 100.0 32 ............................ TCCAATTAGTTTTACTGTTACTTAGTTGCCAT 501713 28 100.0 32 ............................ TAGAGGTAAAGCACCAAGCCGAGTAATGTTTA 501773 28 100.0 32 ............................ CTGTAGCGTTGAAGATTGTTCAATCATCAGTG 501833 28 100.0 32 ............................ TGAAGTCTACAGGGAGATGTTGATCGTCATCT 501893 28 100.0 33 ............................ GGTTGACCGCACTTTAGTGAAGATATTATCTCC 501954 28 100.0 32 ............................ TTCCGTAACGAAGGAAGCATTGTCCCCAGCCC 502014 28 100.0 32 ............................ ATATCGTCAATGTTGGTGAGTTGCGAGGTTAA 502074 28 100.0 32 ............................ TCCAAAGTTGGATACTTGCCATCATAATCGCG 502134 28 100.0 32 ............................ GGCGATTTCGGTTGGGTGTAATTTAGTCATGT 502194 28 100.0 32 ............................ GTGCACCGATACACCAGTTTTTATACGTTTCC 502254 28 100.0 32 ............................ GTTTCTTTTGATTTTTTCCACGCTTTCTGGGT 502314 28 100.0 32 ............................ AAGCGTTTTTGTAGGTCTTGTGCGACCACAGA 502374 28 100.0 32 ............................ CAAGATTAAAGTTCCGTTTTCTAGTGTTGCTT 502434 28 100.0 32 ............................ GTAAGTCCTGTGTGGTGTTCAGAATACCCATT 502494 28 100.0 32 ............................ ACATAGCTTAATACTGTGCCGTCTGATTTGAT 502554 28 100.0 32 ............................ TTATGTTTTATCACCCAAGAGCGGTATTCTCT 502614 28 100.0 33 ............................ TCAAACCATTTTGACCACATGAGTTTGTTGCAC 502675 28 100.0 32 ............................ AGATTTAGATTTAACATTAAAAGCCATGAGAA 502735 28 100.0 32 ............................ CAAGCGTCTACACGCTTGCGTGCAGCTTTTGC 502795 28 100.0 32 ............................ TTTAGTCCAGCTTCGATGTACGTTTGCTTGGT 502855 28 100.0 32 ............................ TAAAAAGCTCGCTGGTGCTGACAACTGTGCAG 502915 28 96.4 0 .........................G.. | C [502940] ========== ====== ====== ====== ============================ ================================= ================== 34 28 99.9 32 CTTCACGACCGCATAGGTCGCTTAGAAA # Left flank : ACGCATAGCAGCTTGAGTAATTGATGTTCCCGTACCAAGCAAAATGCAGGTGGTGTTGGCGATGGGGATATTATAATAATGATTTTCGTATTTGGCTTCGGTCAGATACAAAACGCGACCATCTTTTTGCATCACTCGGCAATGCTCAAGATAAAAGATATTTGCCCGCTTTGAATGCAAAATCGCTTTGAGATCCTTAGGCTTGAGCGTGTCCATGGCGTCAATTTCCTTGATGATGAATTTAATTTAATCACACTCATTGTAGCCTGTCAAGCGATGATACGACCAAATTATAAGCTTATATTTTCCATCTGCCACATTGGTTATGCTATACTAAATTTGCCGTCAGATGATGATGGAAGTAAAAAACCTTTATTTTTTTAACTATTTAAAAACTTAATAAAATCAATAAGTTATAACTGGTCAAATTTTGATTGGGTAAAAAGGGTCAATTCATCATAAATGACTGTTATTTCTTAATTTTTTGGCGTATAATTACT # Right flank : ATTAACCACAAGGTGAAATACCCATGCCCTGCCCAAATGTGCTACAATAAAATCAGTTCACCATCAACCAACGGGGAGCTGCAATGCACCATCACAATTCCGAACTTTTTGCCAAAGCTGTACAATGGCGAGAAAACATTGTTTTTAGTCAAGAAGTGCTTGGCAAAACCTTTCATTTTAATAGCACTTGGGGGATTTTTTCGCCCGAAAAACTCGATGACGGCAGTCTGATGCTGCTTGACCATATTGACTTTCGGTCAGATGACAACAGCATTGATTTAGGCTGCGGCTACGGTGTGCTTGGCATGACCGCCGCACGAGAATGTCCACAAGGACAGCACTTGCTGATTGACAAAGACTTTGTGGCGGTGGAATACGCCAAATTAAACTGCCAAAACAATCAGCTGCACAACGCCACAGTCATGCTCTCAAACGGCTTTTATCATGTTGATAAAACTTACAAATTCAGCCTCGTCATGAGCAACCTGCCCGCCAAAGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCATAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //