Array 1 211009-208598 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJSH01000003.1 Citrobacter braakii strain HH7 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 211008 29 100.0 32 ............................. TTTAATCGGTGCAGCCGTGCGACCGCGCTCGG 210947 29 100.0 32 ............................. AAATGAATATAATGGCGTCAAATAATAAAGAC 210886 29 100.0 32 ............................. TCTTACTCTCCCTGTGCGTGTACTTACCCCCA 210825 29 96.6 32 ............................C GGATCGCGCAGCCGGTTACGGCTCACGACTGC 210764 29 100.0 32 ............................. TCGGAGTTCGCTCGCAAGAACGAGCGGGCAAT 210703 29 100.0 32 ............................. GCACGATGGTCGCCGTGACCGTCGTCGTGCGG 210642 29 100.0 32 ............................. TGGTTGAATTCATTTGTACTAACGAGACTTCA 210581 29 100.0 32 ............................. AGTTGAAAACGGAGATTTACGCAGAGTTATTG 210520 29 100.0 32 ............................. AGCGCGCGTGGTACCAATGCCGCCGATTACCA 210459 29 100.0 32 ............................. CTCGGGCTTCCCATCGGGGCCATGTCCCGGAT 210398 29 100.0 32 ............................. CGTTGCCCTCCCGCTGGAGGGCGTAAGATCAG 210337 29 100.0 32 ............................. CATCGGCGATATTCCCGGGCCGCTGTCTCTCA 210276 29 100.0 32 ............................. ACATTCGAGCCGGTGACCGATTCGAAACAGTC 210215 29 100.0 32 ............................. GGCGAACACGTTTGCGGATCGCGTAAATAGTC 210154 29 100.0 32 ............................. ATGATCGGCGGCGGTAAATTTGCGGCCGTTGT 210093 29 100.0 33 ............................. TTTATTTAATAAAGAAATACAAAAGCGCCAGGC 210031 29 100.0 32 ............................. CTGGTAGGTGAAACAATTTCTTTATCTCTTAC 209970 29 100.0 32 ............................. CCCCATTGAAATATCATTCCTGTGCTGGAGTC 209909 29 100.0 32 ............................. GCTAAAATCATATACCCCGGGAGTGCGGGACA 209848 29 100.0 32 ............................. GCGATAGTCGATTCTGCAGGACCGGCTAACGT 209787 29 100.0 32 ............................. TTGTAACGGGGAAATTAGGCTCGGGTAAAACT 209726 29 100.0 32 ............................. CGATCGAGTCTGTTTTACTAATGGCCTCAACA 209665 29 100.0 32 ............................. ACTGGTGCGCACAATTTTCGCGCACGCCGGGT 209604 29 100.0 32 ............................. CACCTCATGCAACTCGGCCAGATCCGCCTCCA 209543 29 100.0 32 ............................. CGCAACCTGACAGGTGGCGATTATGACGACGA 209482 29 100.0 32 ............................. AATATCGAGCTAGTTTGCCTACACTGATTGAA 209421 29 100.0 32 ............................. CCATCTGGCGCTGGATTTTGAAGCGTCCGTCA 209360 29 100.0 32 ............................. GTCAACGGCGGAGAATCTGCCAGCACAGCCGG 209299 29 96.6 32 ............................T TTGCCTGAAATTATCGCAATCAGAATTTTTGA 209238 29 100.0 32 ............................. GAACACCGAAGTAGCGGAGCAGTTAACCGCTA 209177 29 100.0 32 ............................. CAACGTATGGACATTGCCAGCATCCTGCAATC 209116 29 100.0 33 ............................. GGTTTCTGGATTGGGTGCTGCTGGTGGAAGGTC 209054 29 100.0 32 ............................. ACTTGAGCTTGGGAATTATTGCTCCGGTTGTT 208993 29 100.0 32 ............................. GCAGTACCCGTTATGCGCTGGATTGGCAAACG 208932 29 96.6 33 ............................A TCAACAGCACATTGCAGCGCGAAGGCTTCCAGC 208870 29 100.0 32 ............................. CCAAGAAGCTAAAGCCGGCACCAGACGCAAAC 208809 29 100.0 32 ............................. GGGCTTGGGTCCCTGGCTTACGGGGAAAAAGC 208748 29 96.6 32 .......T..................... GCCACGCCGTTCGGGTCGATTTTGAGCGAAAT 208687 29 96.6 32 .......T..................... CCAGAGGTTCTGATGGTATCCGAAACCATGTC 208626 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTTGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //