Array 1 108452-107167 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBPY010000003.1 Phocaeicola vulgatus strain FTJS7K1 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 108451 33 97.0 32 ................................A TTGGGTCTTATTGTTATTGTGGATTCGATTAA 108386 33 97.0 33 ................................C ATTGACTGCTCGTCGGCGGTCAGCACCTCATGG 108320 33 97.0 32 ................................C TATAAGTGCTACGGTTTATAGTGATAGTCAAT 108255 33 97.0 32 ................................A CGAACTCGGACAAAGTCTCCGAGGTTTTACGA 108190 33 97.0 35 ................................G TCATACGTTGCGAGTTACGTTAACAGCCTTAGTTC 108122 33 100.0 31 ................................. TTCCAACGCTGAAGATATTCTGTTGCACGAA 108058 33 97.0 34 ................................A TATTTCATTTGGTGAGCGTAATCGTCGGCAAGTG 107991 33 100.0 33 ................................. GCGCAATACGGTCGTGATAACCTTATTCCCTTC 107925 33 100.0 34 ................................. TAAACTATGTTGACGTCCAAAACTATATAAAACG 107858 33 97.0 32 ................................A GATTGTATGTTTGCGTTGCCTGCGAACGGGCA 107793 33 100.0 34 ................................. ATATTTGTTCCTCAGATCGACGCAACTAATTGTT 107726 33 100.0 32 ................................. TTTGATTTGAGTTCGAAGAAATTGTTTACTGC 107661 33 97.0 32 ................................A GAATATCCTTGCTCAAATGCATCCTACTCAGT 107596 33 100.0 34 ................................. GCATATATTGCTTTGATCATTTCGATGTGTCTTA 107529 33 100.0 33 ................................. CTCAATGTCCATTTCCGCAAAATTTTTATCGTA 107463 33 100.0 32 ................................. TACGCTTCCTTATGCGCTTGGAGCTGTGCTTG 107398 33 97.0 33 ................................G ATGCCATGTATCTGTATGACTGCTACTGCGAGG 107332 33 97.0 33 ................................C GAGGAAACCGCACAACTCGAGCACCTCAAGCAA 107266 33 97.0 32 ................................A TCGAATAGCGTCCAAACGGGGTGGCCGATTTC 107201 33 90.9 0 ....................A.........G.A | TA [107178] ========== ====== ====== ====== ================================= =================================== ================== 20 33 97.9 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGACCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAACTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGTTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAAA # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.60, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //