Array 1 398-17 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZW010000037.1 Psychrobacter immobilis isolate Psychrobacter immobilis A1007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 397 36 100.0 33 .................................... ATAATAGAACTTCTTGGCAAAACTAAATCATTG 328 36 100.0 34 .................................... GACATGTCGTTTATCCTGACTTTGGGGTAGGTAT 258 36 100.0 32 .................................... GTGTTGCCGTTCGCTTCTGCTACGAATAGACC 190 36 100.0 33 .................................... CCAATAAAGGTGGTGAGATATTGCACCTCAACC 121 36 100.0 33 .................................... TAAGGCTATGTTCGATAGCTCAGCTGGTGGACT 52 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 100.0 33 GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Left flank : GCGTAAAGGTATGGATACATTGATCATAGCGATGCAAAAAATCATTCATCCCACTGATGATGATTTGCGCATTTACGAGGTAGAGCCATTGGAGCATGCGTTTGTGATTGGTAAGCAAAGCGATGATATTATGCTTTTTAGCGAGATAGGCGAACTCAAGCGATGACTCTCAGAAAATAGCTGCTTAAGTCCATTGTGTATCCTAATATCTCATGCTAAAAACATCTGATTTCTTATCTTGCGCTCGCCTTGTACATCTATTACTATAGCAATGTGAGCTTAAAACGCTCATACCCTAGGTCATTAGGGACGGTTTTTCAGACCTTATCTGACGAAGATATTGGATGCTATTTAACGTTTTGGACGTATAATTGGTTATTATTTATACAAATCTTGATTAAAAATTGGTTAAAAAAACACCAACTTTTTATACCAACTTTTGTTAGTTAGTTTTCTGCTTGTAAGTATTTGATTTTATTGATAATAAAAATAATTGTACA # Right flank : CGGCTACAGTAGCATAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [13.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 4811-4566 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZW010000037.1 Psychrobacter immobilis isolate Psychrobacter immobilis A1007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 4810 36 100.0 33 .................................... GGTCCAAACGTACCTTTAACACCACCTTTATCA 4741 36 100.0 33 .................................... CTATGTCTGCTATGAATTCAACCAGAACATCGG 4672 36 100.0 34 .................................... GTAATACCCTTAATGTAACTAGTATTAATACCAG 4602 36 91.7 0 .................................TCT | T [4568] ========== ====== ====== ====== ==================================== ================================== ================== 4 36 97.9 34 GTCTGAAACGCTCCCTGATTCGTAAGGGATTAAGAC # Left flank : AGATAAGTCTGCCGAACAGATATTACTTGATGACTTTAAAGATTATCAAACACCAGAGGTCTTTGTTTTTTATGGAAAAGTCCTGAGTTGGTCAGAAGAGCAAAAATTCTTAGTAAAAGAAGCCTATGAACTTATTATAAAAGAGCCTAGTGTGAAAAAAGACAAGAATAATAAGTGGGTCAAACGCTTACCTGCATTGGTAGAAAAATTAAAGGGTTTCGGTATAAATATCGATTGACTTGCATTGCAAACACAGTGGCGTTATTTTACTATAACAGCGTCGCTTTTTATTGAGCGACCCCTAATTATCAGGGTATTTTAGACTTAATCTGACGAAGATTATCGTGGTTATTTAACGTTTTGGACGTATAATTGGTTATTATTTAGTCAGTTTTTGCTTAAAAATTGGTCAAAAAAACATTAACTTTTAAGCTGACTTTTGTCGTTTAAATTTTTAGATGTAAGTTATTGATTTTATTGATAATAAAAATCGTTGTACA # Right flank : ATAAAGCAGAAAACCACCTTGAAAGGTGGTTTTCTGCGTTTAATGAGCCAATCGTCACAAGCTTGTCATTTTCATAGTATTAACGCTCTCTCCTCCATAATTGGCTCATCAACTGCCTAGTGGAGAGAGACCGATGATTGCCTACAACCAAGCACAAGAAGCCGTACAGAACGTCGGACAGCAAGTGGCTTATGCTGCCGATCAGCTACAGCTCCATGGCTTTGATCGCTATTATAATGCGATGGTTGGTACTTACGTATCTGGGGTATACAAAACACTGCCTTACATTACCTTTGCTCAAGTCACGAATCGCGCACGGAAACCTTTGAACTCAATTGAGCAAGCCGTCACGTATACGACTTTATACGGCAAAAGCCATTTTGATCGCTTCTCTAACGTTATTGGTCAGATCATGGGCCGTAATACACGCACCGAGGCAGTTACCAAAACCATCAATATTGTCGATTACGGCTGCGGACAGGGCATAGCGAGCTTGGCGC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACGCTCCCTGATTCGTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 20449-21039 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZW010000037.1 Psychrobacter immobilis isolate Psychrobacter immobilis A1007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 20449 36 100.0 33 .................................... CGTATTGAGATGTATGACCCTAATCCGGACTGG 20518 36 100.0 33 .................................... ACTTATCAGTTCCTAATTCTAGAAGAGTCCTGA 20587 36 100.0 33 .................................... GTCTTTTTAAGTTGCTCATCATGAGCAGCCATT 20656 36 100.0 34 .................................... TAGTAATATATACCTGAAATGTTTTTATTATAAA 20726 36 100.0 34 .................................... ACACTAACATCTACAGAGATACCATCGTTGAAAG 20796 36 100.0 33 .................................... AAATGAAAGGCAACTTCATCGCCAGTGCTTTTG 20865 36 100.0 33 .................................... ATCTATGCATAGCACCAGTTTTAGCTACTAGTA 20934 36 100.0 33 .................................... TGAATGTATTCAACAAACACGTTATCCTCTTGT 21003 36 80.6 0 .............T......CT.......ACG...A | T [21030] ========== ====== ====== ====== ==================================== ================================== ================== 9 36 97.8 33 GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Left flank : AGCCATCTAAATGGGTTGAAAATGGCTAAATTTTGTTAAACGACGTCAAATAGCTGACTAATATCTCGATATTATCTGCGCTATTTTTCTTGTTTGACTGCAGTTTATCTCATTTTTATCACCATTTTTAAAATGAGGACATGCCCTAATGTAAATAATAAAAGTCAGATCAAACCATAAGCTTGCTAAGATTAGCAGCGGCAGTATACAAACTAAATAAGCGCTAATGCCAATTAGCAGTTGCATGGATTAGAGACATCTACTACCATATATAAATTAACTTTAAACGGTTATTCCCTGATAATTAGGGACGGTTTTCAGACATTATCTGATGAAGATAACGGCAACTATTTAACGTTTTGGACGTATAATTGATTATTATTTATACAAATTTTGGTTAAAAATTGGTTAAAAAAACATCAACTTTTTATGCCGACTTTTGTTGGTTAAGTGCTTACTTGTAAGTATTTGATTTTATTGGTAATAAAAATAATTGTACA # Right flank : AAATAACGAAACACTGTTTCGTCCGAGTGCAAGAGAATTTACATTTTCGTAAATTCTGTCCAACTGGCTATAATGGTCTGAACAGAAAATCATAGATTTTCTCTTGCGTCAGGACATAGCAACTGCTGATTGCCATAGAACAAAACCAATAAAGTCACCTTTTTTAGGTGGCTTTATTGGTTTAATAGCTATCTGGATCTGGTGTGCGAGTTACTCGATATACAATTGCAGCTCTTGTATTAACTCACAAAACATAAGCAGCTGCTGCTCTGTTTCTTGTCGCTGTGCCTCAACGCGCTCAAATTCATCCAATGCTTTTTTGGCATCATTTTGTACGATAGCAAACTGCTGATCTAGCGTTCGCTTTTGATTAGCACACGCTTGATCCTGCTGGCGCATTAGAGCAAGCCTAGATGTAATACTTTTTGTCATGCGCTCATTGAGCATAAACAGTAACTGCTCTTGCTCTTCATACTGTGACGCACATGCCTGTGCCGGCT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 4 23505-23883 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZW010000037.1 Psychrobacter immobilis isolate Psychrobacter immobilis A1007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 23505 36 100.0 33 .................................... TTACGAAACTCTTTACTATGCGTTAGTTTGATC 23574 36 100.0 33 .................................... TTTACCGGAAGCTGATACCAGTAAGACCGCTTC 23643 36 100.0 32 .................................... TTGCGGCAATGCTGATGCTAAGAAGTTGTTAA 23711 36 100.0 34 .................................... GATGCATCTGCATCTCACATCTAGATTGCTTAGC 23781 36 100.0 32 .................................... TGATGTTCTTAGTGTTCTCACCACGGTCATCA 23849 35 86.1 0 ...........................TGA-G.... | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 97.7 33 GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Left flank : TCAACTGCGCCTTTATGACGACTGACCAAATAGACTGCCATACTGCTCCTTCACTAGATATAAGGTCAATGTACTGCTGATAGGCGGCTATTATAGAGACTATCATTTGCCAGTCTCACTATGACAAGCTTGTTAAAAAAGGTAACACACGCATATATTGAAAAATTACGATATCTATCTAAAGTTTAATAGCCAGTGCCGCTGACTATCAATGATAGTCAATATATCGATATGGCTGTTGCACAGATGGATGACTTCGATTACTATAATATAGTGAGCTATGACTATTCACACCCTACGCAATTAGGGACGGTTTTTCAGACATTATCTAATGAAGATAAGTGCTACTTTTTAACGTTTTGGACGTATAATTGGTTATTATTTATACAAATTTTGGTTGAAGGTTGGTTAAAAAAACATCAACTTTTTATACCGACTTTTGTTGGTTAAGCGCTTACTTGTAAGAATTTGATTCTATTGATAATAAAAATAATTGTACA # Right flank : CGTTAAAAAATTGCATGCCAATTTTAGTTTCGCAAGAGAAAATTCTTTAAATGGAATTTTCTGAAGGATCAGTAGAGTTCTCAGAGATTTTCGTCCGAGTGCAAGAGAATTTACATTTTCGTAAATTCTATCAAGCTGGCTATAATGGTCTGAACAGAAAATCCTAGATTTTCTCTTGCGTCGGGGCAAGAACATAGTAACAATTCATAAAATATAAAAAAGGACACAACGATCAGGTTGTGTCCTTTTTTGTGCCTGTTAAATATGATTTTGATTATGAGGACGAGAATTTTTGTACAGATGGTCGTTTGAAAAGCTATGCAACCGTTATGAAAAAGCGTAAGCCTAACTCCAATAGTAATCAGATTATCTATATCTTTGAGACCAATACCACAAGGTATGTCAACTTGCTTTAATTATGACAAAGCCCAAAAAGATATGATGAGAGAGTATTAAGGTCTATTGTCCTAAAATAGTGCATAGAAGGTGATGGGCGAAAC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACCGCTCCCTGATTTCTAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 87328-97629 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZW010000005.1 Psychrobacter immobilis isolate Psychrobacter immobilis A1007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 87328 32 100.0 33 ................................ TAATTGTTCGCGGCTTGGGTATGGGTCTGTGTA 87393 32 100.0 34 ................................ ATGCCCAGCGTCATGCGGTAAGTAGTGCCGATTA 87459 32 100.0 33 ................................ TTTAATTAGAGTGGGGCGTTTTTATTTGCCAAA 87524 32 100.0 33 ................................ TATTATAAGAGATTACAGCTATTGCTAAACTAG 87589 32 100.0 32 ................................ TTTAACCCGCTATCTTCAATTGCTGTTACTTA 87653 32 100.0 32 ................................ TTAGACGCTATCATGGGTTTTATTCATTTTAT 87717 32 100.0 32 ................................ AAACATCTCCACCTCAAGGCTTTTTGTTTGAA 87781 32 100.0 33 ................................ TACTGGGTCTGTAGGCTCTACTGGTTCTACTGG 87846 32 100.0 33 ................................ ACTCGATTGCCTTCAACACGGCAGTACTTATCA 87911 32 100.0 32 ................................ ATGTCGTTTGGTATCACGACATGCCAGCCGTC 87975 32 100.0 33 ................................ TTATCCCTCACCGCATGGGACCAACAAAATATT 88040 32 100.0 34 ................................ GCTAAAAAGCTGTCCATGCAGGTTCGCACCAAAA 88106 32 100.0 32 ................................ AATCGGCATCAATCTAATCAGCGCAATCTATC 88170 32 100.0 33 ................................ TGTCTAAAGATAATACTTAAGCGCTCCTTCTCT 88235 32 100.0 33 ................................ TTTACGGCTTACACGGCTGGCACGTATGTTATT 88300 32 100.0 34 ................................ AAAAAGCGACATCCAAATCATACGATCAACTAAA 88366 32 100.0 34 ................................ TTTAATATCACTCATTCCCCATGCTCCTTCAAAA 88432 32 100.0 32 ................................ CCCACAATGAACAGCTAAAGAAATGGGCTTGC 88496 32 100.0 32 ................................ TGGCAAGTATGATGCTACAGACTGGCAAAACA 88560 32 100.0 35 ................................ ACCAGTCAGCCTTTCAACCAATAGCTCTATCATGG 88627 32 100.0 34 ................................ TGGTAAAAACGATGTATCGGCAACAGTAGATAAC 88693 32 100.0 32 ................................ GTCTAATGCTGAGCTAGTCTATCGTCTTGAAA 88757 32 100.0 33 ................................ AATGCAGATGCTAGACAGCGCCAACGGTGGTCA 88822 32 100.0 35 ................................ GGTCGTGCTAACCACATCAAAAGTATTTGGTGCGT 88889 32 100.0 35 ................................ AGATATAAGGCGCATAACCAAGTTGTTGAAAAAAC 88956 32 100.0 33 ................................ TTGTGTAGTAGTTATAGTGTGTAGGTCAATTTG 89021 32 100.0 33 ................................ TTACTTGCTGAGGGTGCGATTGAAGAAGTCAAA 89086 32 100.0 34 ................................ AAGTATCGGCGTATAAACCCCATCGTCAACAACC 89152 32 100.0 33 ................................ CTTGGCATGAATGAGGACGACAGAGCTAGCGTA 89217 32 100.0 33 ................................ AGCGTACAGCGAGCGAGACAGTAACTCGCACAG 89282 32 100.0 34 ................................ CTATGTAACTGTGAAATTCAACACCTAGACGCTA 89348 32 100.0 33 ................................ TATTATAGCAGAACCCAATAGATGAGTAACTAT 89413 32 100.0 32 ................................ ATTGTTGTCACGCTGTCGCTCAAGGCTGCGTG 89477 32 100.0 32 ................................ ATAAACAGCATAGCAAGTAACCATAAGCCACC 89541 32 100.0 32 ................................ ACTATCCCACAACTTATTGCCCACTCTAAGAG 89605 32 100.0 33 ................................ CATTAAATATGGGACAGGTCAAATCACATGGTA 89670 32 100.0 32 ................................ TGACCTTTACGTTATGGGAAAAGGGATTGAAA 89734 32 100.0 33 ................................ ACTATAGGATAATAAGAAATGGCTATTACTTTA 89799 32 100.0 33 ................................ TACCAATATCCCAAAAGGTATCGACCGGCACAT 89864 32 100.0 33 ................................ AGCTCCTTACTCTCGCGCTCGATTAGCGAGCTT 89929 32 100.0 32 ................................ TATGCGGATTTTACAAATGACAGGTATGTCAA 89993 32 100.0 33 ................................ TCTACTTTTGACGCAAAAAGACCACTTCAAGAA 90058 32 100.0 33 ................................ GTCCTACGGATATTCAGCGCCGCATACGCGAAA 90123 32 100.0 32 ................................ CCTAAAAATGCACAGCCGCGAGATCGTGCCAA 90187 32 100.0 32 ................................ TATTCGAGACAGCAGGTGATTTTTGGGTTAAT 90251 32 100.0 35 ................................ TAGCAGGTCGTGTTAATGGTGGTCGTATATCTAAA 90318 32 100.0 32 ................................ TCCCGATAAATGCCATTAAGATACCCTTGAAA 90382 32 100.0 33 ................................ TTTATCATCTACTAATTCTAAGCCTGAAAACAT 90447 32 100.0 34 ................................ TACGACAACTCACGTTCAGGCGTGAAAATGAATG 90513 32 100.0 34 ................................ TTGGTTCATGCCAGCGATAGTGCCGCAAATGAGC 90579 32 100.0 32 ................................ AAGCTGGCGGCGCTTGAAACTAAATTCATTAT 90643 32 100.0 34 ................................ TTAGAAGTAAAAATAAACCACAAGACGCAACCGC 90709 32 100.0 32 ................................ TTTTAATATATCTTCGCGCTCTTCGTCGGTTG 90773 32 100.0 33 ................................ AGGTAATTGGGATAAAAAAGACGAAGCAGGACT 90838 32 100.0 34 ................................ TATTAAAGCGTTGAACTGGTGTGCCGCCCACTAC 90904 32 100.0 34 ................................ TTTTAATTTGTTGACTTTTGCTGCTATATTGTTT 90970 32 100.0 33 ................................ TTTATGCTGATTAGCAAGAAGAACACAAAATCA 91035 32 100.0 33 ................................ CCTGATTTATTTGTCTTTATCGCAAGGGGTGGT 91100 32 100.0 33 ................................ GTACAGACGCCTGCATATCATTTATCAGGTAAT 91165 32 100.0 34 ................................ TTATGTATAAGGATAGAGGTATCCAAAGCGTCTT 91231 32 100.0 34 ................................ CACTTTGTTGCCTGCCAAACTCCGTCCTTTTTGA 91297 32 100.0 36 ................................ CCTGATATTTGCCATCAGTCACCAGGGGATTATAAC 91365 32 100.0 34 ................................ TGACATGCTGTTATATAGTGTCCTGCCATCGCTG 91431 32 100.0 32 ................................ TTTAACTTGCTCGAAAAACTGGTCAATGAAGA 91495 32 100.0 33 ................................ AATGGTTTTTTTATTAAACCAAGTAGCTGCCTG 91560 32 100.0 33 ................................ GTGAAACTTTGGGTCATAACATCTTTGTAATGC 91625 32 100.0 31 ................................ AAGCCGCCTGCTGCCGACGTGTGCCCATAGC 91688 32 100.0 32 ................................ CACCGCATCATGTGGGCGGTTAAATACAATAA 91752 32 100.0 33 ................................ AAACAAGATGGTTGGTCTGCCCTCATCATCAAA 91817 32 100.0 32 ................................ TTAAATATAATGGTTATTAATGCCGAGCCTGG 91881 32 100.0 33 ................................ ACTTATAACCTGCCTTGTTTTTTCCTTGCCACC 91946 32 100.0 35 ................................ TGATAACTGTTCAAGCGTAAATGCTATCGTAGAGT 92013 32 100.0 33 ................................ CAAAACAGAGTAAGGGGTAAGGCATCCAACAAC 92078 32 100.0 34 ................................ TCATCATGTTAGTGACAATATTATCGCTACGAAA 92144 32 96.9 33 ...........................A.... AATTCCGTTGCCCCAAAACGTCTTATCAGAACC 92209 32 100.0 35 ................................ AGTAGAGATCACTAGCGTATCCTCATAAGCAAATC 92276 32 100.0 32 ................................ GAGATGGCTAAAGAGTTTGCATTACAAGCGAG 92340 32 100.0 35 ................................ TTTTGATTCTGACGAATGTTGGTGGGTTTACTTAG 92407 32 100.0 34 ................................ CTACAATCCTGCAACTCGAAGTTTTTTAGATAGT 92473 32 100.0 32 ................................ ATGGGGCTACTGTGGATTGTGTCGTGGTTGGA 92537 32 100.0 34 ................................ CATAAAATAAAGACTCTATTTTGACCTTGTTGTA 92603 32 100.0 32 ................................ CTCTAAGCAGCAACCGATTTGGACGCATAAAT 92667 32 100.0 32 ................................ AAGAGGGTTCAATATGAATACGCCAAGCGAAA 92731 32 100.0 33 ................................ AGTTGAGAACGCCAAGGCAGCAGATGAAGAGTC 92796 32 100.0 32 ................................ AGCAGCAGGTGGCTTGTGTGCAGCTCTTGTAA 92860 32 100.0 33 ................................ ATACAAAATACAGTGCCGCCTTTTTGTGCGGTT 92925 32 100.0 34 ................................ TCATTAAACGCCATGCCCCAATGTCCAAAAAGAT 92991 32 100.0 33 ................................ GTTACTCATCGTCTTATTCCTTATGAAATCTTG 93056 32 100.0 32 ................................ GATCCTTGCGGTAAATCTTGCAGACCGCACTA 93120 32 100.0 33 ................................ TAATCAACCTGATACTGGAGTATCGAGAATGAC 93185 32 100.0 33 ................................ ATACTTTGTCTTGACGATTATTTAATCTCTATT 93250 32 100.0 34 ................................ TTTAGTATGTTCGTCTCTAATGATCTATTTTATA 93316 32 100.0 34 ................................ TTGTGGCGCATTGACTCCCTCAAAGCTATTGATA 93382 32 100.0 32 ................................ ACTTTTATCACGCATAACAAATCCTTTATTTT 93446 32 100.0 33 ................................ TGTGAAGTCGTTTAAATTCATTTGCGATAAATC 93511 32 100.0 35 ................................ TGTTTTGCCCTCTTGTGAGAGTTCATCAAGTTTTT 93578 32 100.0 33 ................................ AATCTGTTGTGATGATGGGCCAGTAAATGCTTT 93643 32 100.0 33 ................................ CGTTAGTCGGGCCGTATCTAGCTATGCCTATGG 93708 32 100.0 33 ................................ ATCGTTTGTTTAGCTTTTCAACCCACCCAGCAA 93773 32 100.0 32 ................................ CTTTGCAGTGTTTAACTTGTTGGTTAGTTGAC 93837 32 100.0 32 ................................ ATGCAAGGCAGCTTGCAGCTAAAGAAGCCAAC 93901 32 100.0 34 ................................ TTTAATGCCTGTCTGTGCTCACGTTGAGCTTTTG 93967 32 100.0 32 ................................ ATCTAGTCCGTCAAAGACACTTTTGTCTAGCT 94031 32 100.0 33 ................................ TTTAAAGGCTTGGTTTTGCGCTTTGCCATGTCA 94096 32 100.0 33 ................................ TTAGCAATATCGGCTATTACATCTTATCCGCTA 94161 32 100.0 32 ................................ ACTAAACGCAAAAAAGACCGCCGAAGCAGTCT 94225 32 100.0 33 ................................ ATAAAACCATAAGCCCGCCCGTCATCATCTACC 94290 32 100.0 32 ................................ CTGCGAATTACTGGCTTAACCTTGCACAGCTA 94354 32 100.0 32 ................................ TAATAACCCTTCATGGATATTCTACGATATTA 94418 32 100.0 33 ................................ GTATATAGTCGCTAAGACGCTTTGAAGTGAAAG 94483 32 100.0 30 ................................ GTCCTGCATACGCAGCGCATTAAAGCCTAC 94545 32 100.0 35 ................................ ACCAATGCGGCTTAGATGCTCAAGTCTTGACAGCA 94612 32 96.9 32 .............T.................. TATAAGGCTTTGAATATACGCAAGCAAACTGG 94676 32 100.0 34 ................................ TATATTGTATAAATACAGGAGCTTCTAAGTCTAC 94742 32 100.0 34 ................................ TCATGTATATCTTTAATATCTAAAGACGTAGGGA 94808 32 100.0 33 ................................ GGCTAATACATTAATACAAGCTAATAAAGATAA 94873 32 100.0 32 ................................ TAATAACCCTTCATGGATATTCTACGATATTA 94937 32 100.0 33 ................................ GTATATAGTCGCTAAGACGCTTTGAAGTGAAAG 95002 32 100.0 32 ................................ TAGTATGATTACAACTATTCAAGGTAAAGTAG 95066 32 100.0 34 ................................ TAGTTTGCTCTGTACGCTCTCTAATACTTTGTTT 95132 32 100.0 34 ................................ GGTAATACATGGATAAGTCTAAAGATAAGACAGG 95198 32 100.0 33 ................................ AGAAAGTAGTTTTAGACCTATAGCTGATATGAT 95263 32 100.0 32 ................................ TTAGCAGGATCAGAAGACACTAACTACACTGA 95327 32 100.0 31 ................................ ACTTGTCCCCACTCTAGAAGTTAATGCTGTT 95390 32 100.0 33 ................................ ATCCGTAGCAGTATGAATGTGGCGATGATGTCA 95455 32 100.0 32 ................................ AGTAACTGGTAAAGAGCATAAGCACGTTAAAA 95519 32 100.0 33 ................................ TTTTAGCTTACGCTTATCAAAAAACAAGACAAC 95584 32 100.0 32 ................................ CAATCTGACATAGCTACTTGCATTGCTATCCT 95648 32 100.0 34 ................................ ACGAAAAATGAACGCAAATGAACGCAAAGATTTG 95714 32 100.0 34 ................................ GGCAGTCGATTCGATGACCAAGATACCGCTGGCA 95780 32 100.0 32 ................................ ACAACTGATACAACGAGTCGCAAGAAGAAATA 95844 32 96.9 32 ...A............................ ATACATATAAGCGATATCAGAGTTAGTCTGAG 95908 32 100.0 32 ................................ ATTAGTGGTACAGGATTGTTAATATCCTTTTT 95972 32 100.0 35 ................................ GATACTAACGCTATGTAATTCATGTTGTATTAATC 96039 32 100.0 32 ................................ ATTTGTGCTGTACTGGCTTTCGTTGTGCTTGT 96103 32 100.0 32 ................................ CGCCAATGACGGAAGTTAAGCTAAATCAATCA 96167 32 100.0 34 ................................ CATAAAACCAAACGTCTGCGCTACCGTGTCATCG 96233 32 100.0 32 ................................ CATGTAGCGCCTAAACGCCTTAGTAGTCGTTG 96297 32 100.0 34 ................................ TTGTAGCTCTGCCTTGATCTCGCTTTCTGTTCTT 96363 32 100.0 32 ................................ AGGGCTAGCAAGGCTTATCGGCAACCAAAAAG 96427 32 100.0 32 ................................ TTATCACCATCTAAGATACGTTGCTGTTGGTC 96491 32 100.0 35 ................................ AAAGCCTGATATAAAATTAGCGCCCTCACCAGTTG 96558 32 100.0 32 ................................ AGATTTATACATTATGCTTTTACTCCTTTGTG 96622 32 100.0 32 ................................ CGTGTGCTGTTTTGGCGCACCACTACCCTGAT 96686 32 100.0 33 ................................ ACAAGCCGAGCAGATAACGCAAGACCTGAGACA 96751 32 100.0 33 ................................ TTTGCCGTATGCGACTAGCACACTTGGCGCTCC 96816 32 100.0 34 ................................ AAAACTAAACCACTTGCTTTGACCAACTAGCTTC 96882 32 100.0 32 ................................ TTAAAGCTATAAGCTGTCAATTCTGCTTTACA 96946 32 100.0 33 ................................ TCACAGGTACATTGTGGTTGTGGTTTTTGCTAA 97011 32 100.0 33 ................................ AATCAGCAGCACTGCCCTTGCGCGTGAATCACT 97076 32 100.0 33 ................................ CGTTGCTCGATGAGGTTGTCATGGCAGACGTTG 97141 32 100.0 34 ................................ GATGAATTGATAACATCAATGCAAAGCGGCGATA 97207 32 100.0 34 ................................ CTTTGTCTGCCACCCTAAGTAGAGTGCATCTATA 97273 32 100.0 35 ................................ CAGAAGTGCAATACGCAAACCTAATCCCAGTTGAT 97340 32 100.0 32 ................................ GCTAAAGCGATAGGTGGTAAATATCATGTAGA 97404 32 100.0 33 ................................ TTCAAGCTCGGTAAGCAGCACACCAACCGTCAC 97469 32 100.0 33 ................................ ATCATACTCAACTATGCGTCCGTCCGGTGTTTT 97534 32 100.0 32 ................................ CATTATGGTGGGCCAGTTACTAGCGGCAAGTG 97598 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 159 32 99.9 33 TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Left flank : TGCAACTTGCGCTAAACGGCTGCGTCACGTCGCCAAGCATTGTTTGAACTTTGGACAGCGAGTACAATATTCGGTGTTTGAAATCGAGGTCAATCCTGCACAGTGGACGATGCTTAAAGCAACGCTTGAAGATGTAATCAATCATGACGTTGATAGTTTGCGCTATTATTATCTCGGTAAAAACTGGCAAAACAAAGTAGAGCATGTCGGAGCAAAACCTGTGATAGACTTGAACGATGTCTTGCTATTTTAGGCACTATAACCACAGTAAGACTTTTTATTTGGCTGTAATAAGGTCAATGCGAACCTATAGCGTACATGAAATCTCTAGGAGATTCGCAAAGGGAACGCAATGTTATTTAACAACTTGATTTTATTACTTTTATCCCTCAGAAACAAAACTTTGGTGAGCGTCCTGCTTGCCAAATTCGCTTATAGTTTAGACGTTCGCAAATTTCAAGGTTTTTTCTTAATCTTATTAGCGACTTAGACTAGGGGCT # Right flank : CTTATCTGCTGCATAACTGACCACTTTGTACTTATTCAGGACGCATTAAAGCGCAATAATCATAACTCTTCCTCAAATAAACCTACAAATACGATAAGACGTCATCTACTGTCGTTTATTGCGAATTTTTGCTCCGATCCTTTGCAAAGTGCGTCCTAATTGCTCTATATCCGTAGTATTGTATGGGTAGAGATCAATAAATGGGGCGTATTGACCACAACAATGAACGGTTATCTTTGTGAGGAACATATGAAGTCCCTGAATTTTTTATCAATCGCTAAATTACAGACAACCCCTGTGCTCGTATTTCAAGACGTCCTTAGTCTATTTAATATTTATACCTATCATATTAGGCCCTTTATTAATGATGCCTATAAGCTTGGACAAAGCTCTGCATGGGATAGATCAACATTCTTTATTAAAGAGGATAAACAAAGGTTTTTAGCCAATAATTTTGAGCTTTTTCACATCATCAAAAATCCTGATATGGACTTTAACGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //