Array 1 460713-463839 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCJH01000003.1 Elizabethkingia meningoseptica strain EM1 NODE_2_length_988765_cov_39.0842, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 460713 47 100.0 30 ............................................... GACGCAGTTAGTAAGAATCCAAACACTAAA 460790 47 100.0 30 ............................................... CTTAATATTTTATCATCAAGGCAAAAATTA 460867 47 100.0 30 ............................................... TTAGTCTCATAACAGAACCCCTGATCGTTC 460944 47 100.0 30 ............................................... GCCGTAGCAATACGGCTATTTTTATGCTTG 461021 47 100.0 29 ............................................... ATGCTCCGGAGATAAAGTTGTTCGGAAAG 461097 47 100.0 30 ............................................... TATAAATGATCCCTGTAGCGGGTCGGGGCG 461174 47 100.0 30 ............................................... TCTGAAGCAGATTGTTTGGTCTAACAATAC 461251 47 100.0 30 ............................................... TAAGGAAAAACAACCTTACAAAAATTTAAA 461328 47 100.0 30 ............................................... CTTTAACGTAGAACGTCATATCGCCGTCAT 461405 47 100.0 30 ............................................... TCGTAGTACGATATACTTATACTTCCGCGA 461482 47 100.0 30 ............................................... GACTTAGGATGTGAATTAGTCATAGACTTG 461559 47 100.0 30 ............................................... ATACACGGAAAAGCGGAGCTAAACGCTGAT 461636 47 100.0 30 ............................................... TAATGAGGAACCTACTTACGATAGGAACAA 461713 47 100.0 30 ............................................... ATATTAGCACGATATAAAGAGTACATTAAA 461790 47 100.0 30 ............................................... CACTTCTGCGATTGAAGCAGGTCAGAACAG 461867 47 100.0 30 ............................................... TATAACGGCAAGGAGATCAAATATGCGACG 461944 47 100.0 30 ............................................... TAGACGCAAAAAATCCAGAAATTGTTTTCA 462021 47 100.0 30 ............................................... TATGATAACGATAATACTCTGAATGCTCTG 462098 47 100.0 30 ............................................... CCCGGTGTTACCCGGGGCAAAACTGCAACC 462175 47 100.0 30 ............................................... GGGGAGGCCCATATATAGAAGCTTTAACAA 462252 47 100.0 30 ............................................... TCGACATTTAATATGTCTTATGATCGTAAA 462329 47 100.0 30 ............................................... TCTTATTCTCAAGGTGTTCCTAGGCATTTT 462406 47 100.0 30 ............................................... CCGAGATTTCCCGGGGCTTGTTTTAAATTA 462483 47 100.0 30 ............................................... TAAACTGTCCGTTTGCTTTGAAGTAAGAAT 462560 47 100.0 30 ............................................... GAGCGGGATTCTTAAGTCCTCTGAATTGCC 462637 47 100.0 30 ............................................... TCCTGACTCATTTTATAGGGTTCATTTAGC 462714 47 100.0 30 ............................................... ACGGGCATAATAAGTAAAGAGGGGCAGTTA 462791 47 100.0 30 ............................................... TATTGTTCCAACTGTGCATTTTCACTCCAG 462868 47 100.0 30 ............................................... TGTCCAACAGAAAGAAGTCCAGCAAGTTGT 462945 47 100.0 30 ............................................... GTGGTTGAATGAACAATCACTTCAAATCCT 463022 47 100.0 30 ............................................... TTATCCTTCTGATCCCACTTATAGTTGTCT 463099 47 100.0 30 ............................................... AGTAAAACATTTAATTTAAAAAACTTTATT 463176 47 100.0 30 ............................................... TACCGAGGAGCGGGGAAAAAAAAATTGCGT 463253 47 100.0 30 ............................................... CGGCCGCTATATATAGACATTCATGGGATG 463330 47 100.0 30 ............................................... TACATACTGAATACAATATTCATGATATAG 463407 47 100.0 30 ............................................... TTCTCCATTAATTTGTTCAATTAAGGTTAC 463484 47 100.0 30 ............................................... TCTACCCTTTTAGGCTGATCCGCTAATAGA 463561 47 100.0 30 ............................................... ATGCAATCTTATCAAAGAATTTAGATTTAA 463638 47 100.0 30 ............................................... GAATAGCAATGATAACCGTATAACAAGCTG 463715 47 100.0 30 ............................................... CCGGATGAGCTTCTTAATATGCTTATTGGA 463792 47 78.7 0 ................................TG..G.TAGA.T.CT | T [463822] ========== ====== ====== ====== =============================================== ============================== ================== 41 47 99.5 30 GTTGTGCAGTATCACAAATATACTGTAAAATGAAAGCAGTTCACAAC # Left flank : ACAAGTTAACCCGACCCTTATTGGTTGCAGTTAAGATGACCGTGATCTCTCTGTATAAATGCTATACAGGAGAAAAGCGTTTGATTTCTTACCCGGAACTGGTATGAAAGAGGACCGTTTTAATGCATACCGGATTATGTGGGTTTTAGTATTATATGATTTACCAACCGAGACCAAAGCCAATATGCGGGATGCCGCACAGTTCAGGAAACGCTTATTGGATGATGGTTTTTCGCTTTTCCAGTTTTCTATGTATGTCCGCCATTGCCCCAGTCGTGAAAATGCCGAAGTCCATATTAAAAGAACAAAAGCAATGTTACCAAAAGCAGGAAAAGTAGCCATTATGTGTATTACGGACAAGCAGTTTGGGGATATAGAGATCTTTTTTGCCAGAAACAGAGAAGAACCCCCACCAACCTTCCAGCAACTGGAATTATTCTGATTTTTTGAATCCTAAATTAACGCAAAATCCGCTGAATATCAGCGGATTGAATTTTGAG # Right flank : TAAGGAAATTTTACAAATCATGGATTAAATGTTATATTGAGGTCTTCATAGATATTTAGAAACCTCCTATATTTGCAACAAACCTTTCCATGCCCTTAGAATACCGAAAATTAAAACCTTATGAAAGCAGAATTTACAGAGAGATTCGCTTGGAGAGTCTGAAGAAATTTCCTGAAGCTTTTGAGGCAGATTATCAGGATGCGTTGAGAACTGAGAAACTTCGATTCGAGATTGATATTGAAAATCAGGAAACCGACAGATTTATAATTGGGGCATTTTACGGGGATGAGCTTATCGGTATCTGTGGTTTTGTAAAAGATGAAAGCGGTAGAGGGAATATATTCCAGATGTATGTTAAAGAAGAATATCAGGGGAGAAACATTGGTATGGCGCTTCTTCGTACGGTTATAAAGGAAGCCGATACAAAAGAAATTATACTGGAAGTAAAGCCAGATAACTTAAGTGCTTTTCATTTGTATCAGAAAGTAGGGTTTAAAGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGCAGTATCACAAATATACTGTAAAATGAAAGCAGTTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //