Array 1 19390-21449 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDUT01000004.1 Bifidobacterium saguini DSM 23967 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 19390 33 100.0 34 ................................. TCGCGAAGCAACCGTTTGATTCGTTTTGAATCAG 19457 33 100.0 35 ................................. ATATCTGGGGACGAGCCCCGGAGCGCACCGGCCTC 19525 33 100.0 33 ................................. TGCATCGAACCGCCGGCGTAGCGGCCTCGGCTT 19591 33 100.0 34 ................................. ACCGATTGCACGCGCTGCTCGGTTTCGCAGACGG 19658 33 100.0 35 ................................. CGGAGGTTGATAATGCTGTTGAACGAGTATTGGGA 19726 33 100.0 35 ................................. ACAGTCTGCACGCGCTGCTCGCGCTCGCAGACGGG 19794 33 100.0 35 ................................. TACATCGACGTGAAAAGCCCGAACGGCAAAAAAGC 19862 33 100.0 33 ................................. TGATGCAGATGTTAGCACGTGCCAATATGTTGG 19928 33 100.0 35 ................................. TATTCGCATTCCCGTGGTGGATACTCGCCATGCAT 19996 33 100.0 36 ................................. ATAGGGCCGGTGAGCTCCGTTTCCGTACCGTCCGCC 20065 33 100.0 35 ................................. TTCAGCGGCGCGGGCAGCTGGCTCGTATCCGCTGG 20133 33 100.0 35 ................................. TCCCGCGCATGCAAGCGGAACGGATCCCCCAGCCG 20201 33 100.0 35 ................................. GACACGGCGAAGAACCTGATCGTCGCGGAACCGTT 20269 33 100.0 34 ................................. CATGCATGAGGCGTTCGACAAGGCCACCAAGGCG 20336 33 100.0 33 ................................. GCCAAAATGGCCAACGGCGTGGAAACCGCATTG 20402 33 100.0 37 ................................. TTCGCCTGGCAGGGGTACGCGCACATCCCCGACGGTC 20472 33 100.0 36 ................................. TCCAACGCGGCAAGCGGCATCGGCAGCGCATTGAAA 20541 33 100.0 35 ................................. ACGTCCTTGGACTCGTCATCGCCGGAGTGCTGCTT 20609 33 100.0 33 ................................. ACCGGACTCTCCGGCGCGCTCGGAAGCCTCGCG 20675 33 100.0 34 ................................. CTATACGCCAGCGGCGTGAAGCCCTCGAAACCGG 20742 33 97.0 33 ......................T.......... CGGTCATCGTGTACCCGCAGGGCGTGTTCCCAA 20808 33 100.0 34 ................................. GCCGGTCGGGTGGATGCTTGGCCAGACGACGCTG 20875 33 100.0 36 ................................. GTCACCCAACCAACCGAGGAAACCGCACACCGAACC 20944 33 100.0 32 ................................. GCCGCAGGCAGTTGCGTCCAGTTGCGGGTCTG 21009 33 100.0 37 ................................. AACGTGCTGTCACCGGTTTCCGCGGCCTTGCCGCCGG 21079 33 100.0 34 ................................. CTGAGGGTACTGCACCATTGCCGAAGAAGCCACG 21146 33 100.0 36 ................................. TGCGGACTCCGCTGGGGCGAGGCCGCAGCATTACGC 21215 33 100.0 35 ................................. ACCGTGCGTGCGGGCCGGTTCGCGGTCAGACTCCG 21283 33 100.0 35 ................................. ATCGGCCTGGCTAATCTGGCCGGCCAATTGCAGGA 21351 33 100.0 33 ................................. ACGCAAGGTGGAATATCCTGCGTGTAGTCAACG 21417 33 93.9 0 ...........TG.................... | ========== ====== ====== ====== ================================= ===================================== ================== 31 33 99.7 35 GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Left flank : TGAATGTGCGGTTTCGCCTTCAGGCTATTTGCAGCTTCGTCATGAGCTGAATGACATCATCGACATGGAAAGAGACAGTCTTCGTTTTTATAATCTAGGTGCGAAGTATTCAGATCGTATTGAGAATGTCGGTAAACAGCGGCATCTACCAGTTGATGATGTCATGTTGATATAAGACGGTGCGATATAATGTGCTTCGATTGGATTGGTACCGTCTCTGGGGAAGGGGATGCGCGGTGCCGCGTATGGTGCGATGTGTGAGCTGTCATAAAACTAGTAGAGGTTCGCACCGACGCTGATAAGGAATGAGGATTATTTTTCGGCGATTCGGTAATATTCCAACTTCGTTTGCGGTTTGATAACTAAAAAGTGGTTAGACAACTATCCGATATGTAGGATGCAGCGCGAGTTTAGGGTGTTCTGAAGGATGAATAGTTGATACACTGCAAGTGTCTGTGAACATATTGTCCACAATGTGGGCCGTATATTTCATGGATGCT # Right flank : TGATGACGGTGCTGAACGGTTTGGAATAATCCGGTGGTTGATGATGGCGCTGACCAGTAAGGGGTCGTGTTCACCGACCGACATCGCAGGAATCAGGTGCGGTTGGCGATCACCGCCGACAGTCAGGCGCGAAGGCTCTGGGATTCCACGTTGGACTTGGATAATCTGAAGGGTTCGCAGCCGATATGGAAGAACGCGATGCTGAACCTGTTGCAGACATGGTGGCAAGGTGAGCGCCGCAACGGCTCGTTCCGAGACTCACGACAGCGCAGAAGCTCGTCGGAATATCTCAAGCGACGACGGCAGACTGTTTTCGATAACGGGATTGCAGGGCTGCTCCCCGAAGTCAAACCAACAGGGCAAAGTCCGGATATATTGGCGAATAACGTTCAGCCCCAAACGAAGAGGTCGTCAATCACGTCCTGCACGGGGAAGGCGACGGGGAGCGAGGAGGCCGTCTGTATGGTTCGAATATATTAGGCAAGACCGAGTTCCTGCAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACCCTCCTCACGGAGGGTGCGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.30,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //