Array 1 30153-32087 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000022.1 Nostoc sp. CHAB 5844 NODE_22_length_98732_cov_77.676862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 30153 37 100.0 35 ..................................... TGGTGAAATTTACTGCACTTGCTGCACTAACACTG 30225 37 100.0 35 ..................................... CAGTATTCAGTTGGTCGATATGTTCAATATTTAAA 30297 37 100.0 41 ..................................... ACTAGGGGGAGGGGATGAACAAACCGCAGACGAACAGTAAG 30375 37 100.0 37 ..................................... GAGTGCTGATGGGTTAATTAGTCGCCAGCCCGGTAAA 30449 37 100.0 35 ..................................... TTGTATGATTCAGGGTTAAAACCTGTACCAGAAAA 30521 37 100.0 33 ..................................... CAAAATTTATTGTATTCACGAAGAATTATGATA 30591 37 100.0 33 ..................................... TGGATTGGCCGCGATCGCAGCCATTGGTGCGAT 30661 37 100.0 38 ..................................... GCCATACATTGAAGGTCACAATACAATGATGAACAAAA 30736 37 100.0 34 ..................................... GGTAACGGTGAGCGATCGCGGTTGCAGTAATCCT 30807 37 100.0 35 ..................................... TTAAACGTGGTGTCTATTTTCAAAAAGTAGAAAGT 30879 37 100.0 40 ..................................... GCAATAGCCTACAAGGGTTTATTGGCTATAACGAAACCGA 30956 37 100.0 36 ..................................... TAAACGTGGGCAAGTGGTCGCGTCTCGCTATTTAAC 31029 37 100.0 36 ..................................... CAATTTCTAGTTGGTCGGGTGGTTTTGGGCGCTCTA 31102 37 100.0 35 ..................................... AACATCATTAGTCCACTTATCCCAAAAAGAATTAC 31174 37 100.0 35 ..................................... ACCGTATCGGCAACTCCGCCACCTCCCCCACCTGA 31246 37 100.0 35 ..................................... GACATTCATTCAATTGATGGCGAGTTTGCAGCTGG 31318 37 100.0 33 ..................................... TTTAGCGATCGCCCTAGCTCGGTATCACTACAA 31388 37 100.0 34 ..................................... TTAAGCTTAAAAATACACTCCCGCCACCAACAAA 31459 37 100.0 41 ..................................... ATAAAATATACTTATACAGTCTTTTTTGAGATAATGCCACG 31537 37 100.0 34 ..................................... AAAGATGAGTCTCGAAGCCAAAAAACAGATTTTT 31608 37 100.0 38 ..................................... TTCTGGCTGTAGCTACCGATACTTGCGCTTTAACGGCA 31683 37 100.0 33 ..................................... ACCTTGGCACTAATCAATACTGTACTTGGCTCT 31753 37 100.0 36 ..................................... AGGTATTCCAACCAAGCTAGAGAAATCTGGATATAG 31826 37 100.0 35 ..................................... ACTGCTACATCAACTAGAACAAGACTACTTACCGA 31898 37 100.0 35 ..................................... CAGAGCAGTCGCGATCGCTCCCTATGTCGAAGGTT 31970 37 100.0 44 ..................................... GTAGTTCTGCTGTGTTAGCGCTAAAACATCCAGGTTGTCTTGGA 32051 37 97.3 0 .......................T............. | ========== ====== ====== ====== ===================================== ============================================ ================== 27 37 99.9 36 GTTGAAACTTCAATTAATCCCTAATAGGGATTGAAAC # Left flank : ATTTCAGAACAAGCTAGGTTGCTTTATGCAGAATTACCAAACACTGCCGATTTATCACAACTATTACCCGATGATTTTGCGATAATTCGGGAATACTTGCAGCGACGTAGTGCAATGGCTGCAAAATCTAGAATTGCCTTGGCTTCTAAGTTAACTCAACAAGTTGCTGCTATTGTTAATTTGGACAAACTGCCAGAAGTTCCTCCTGATGTTTTTTTAGAGGCTGTTTACTTAGCTTATCAACACAAAGAGTTATAGTACTTTCTGTGCTAGATGCGCGGATGGGTAGGTGTAGAAAATCCACTCTCAGGAAAAATCGGTGTACTCTCGATGGTACAAGCTTTTGCCGAAAAATTTAATTAAAACTATCCGCGCACCTTATCTAAACTGGGTTTTAGCGTTTTTGCGTAAATTAATTAAAATTTTGAGATGTTAAAATTAGACCATCCGCGAAATCGAACCTTGAAAACCAAATACAGATTAGCTTTCCGGTTTCCGCT # Right flank : CACGCGGACAAACGAAATTCAGAAGCTTTCCGCCACTCCTGAGTTGAAACTTTTATTAATCCCTATTACTCTCTTCCTGATTATTACCGAAATAATTTTTAGGCTCAGAGGTTGTTTGAAAAGTCTAAATTAATACTAGCCCTGGCGATTGGAAATCGCGGCTATACAGACAAAACCCGCCTGCGAGGGTTAAAAAACCTTGATTTTCTGTTAGTCCGCGCAGGCGACTGGCGAACCCGAAGGGACTTAGTTTGTGTAGTAGCGAATTATATTCGCCTAATACTTTTCAAACATCCTCTCACGCAAAGGCGCAAAGACGCAAAGAAAGAAATTTATAGGTATTCTTTGGTTGGGAAGGGAGTAGTAAATATTAAGTAGGGTATGTTACAGCTATGCAAGGATTTGTGCGATTCGTTGGCTAGAAACCAAACATGATAAGGGTTTTGGAGGATTAGCTGCAAGGTAAATCTACCCAAAAGGTAAGAACCTTGACAACTTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACTTCAATTAATCCCTAATAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 224-1841 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000204.1 Nostoc sp. CHAB 5844 NODE_204_length_2041_cov_9.301463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 224 36 100.0 30 .................................... GGCACCGACGAAGGCATCTGGCGGCGCATG 290 36 100.0 30 .................................... GACGTCGACGACGTCGTGCGCAAATATGCG 356 36 100.0 30 .................................... AGTAGGGGTAGCGTTCGGATGGACAGCTTG 422 36 100.0 30 .................................... ACCATCTTCAGCGACTTGAATACGTCCAGC 488 36 100.0 30 .................................... GCACAATGGTAGCGGGCCAAGTTTCCAGCG 554 36 100.0 30 .................................... ACAGCGCCGAACCATTTGCACAGACGTGAT 620 36 100.0 30 .................................... TCAACGTGGTTCCACGCCATACTCAGCACG 686 36 100.0 30 .................................... CAGCGCGCGGTCGCTGCGATCGAGCGTCGG 752 36 100.0 30 .................................... CAAGTTTAGCTCTGGTCGTCGCATCGCGCC 818 36 100.0 30 .................................... AGCGCGGTCCATTTCAAGATCAACGCCCGT 884 36 100.0 29 .................................... GTCGCCCGCGTTGAAGCGCCGGGCCACGG 949 36 100.0 30 .................................... GCGTCAGTGGCTTGCCCTTTTTCAGCCCGC 1015 36 100.0 30 .................................... ATTTCCGACGAATGCTCGTTCTTCAATCAG 1081 36 100.0 30 .................................... CTTGTTCGGGTAGCGGTCACCCACCGCCTG 1147 36 100.0 30 .................................... TGACCACCATCCGGTTCGCCTCCGGTTTCA 1213 36 100.0 30 .................................... AAGGTGCGGGCGCATCGCTTGAGCGCGTCC 1279 36 100.0 30 .................................... TCCTGCTCGGCTGGGGCAACTTGCCCAAGT 1345 36 100.0 29 .................................... CCTTCCTGCTGTTGCTGGGTTAGAGCGCT 1410 36 100.0 30 .................................... CGCATCGCGTCACACCAAAATGGTCGCGGA 1476 36 100.0 30 .................................... GAAACCGCGCGACTTTCACATCACCACCCA 1542 36 100.0 30 .................................... ACGCGCTGCGGTTGCTTACCGAGGACGTGT 1608 36 100.0 30 .................................... CAATCCGATCGTCGCTCGCCATTTCGTGTA 1674 36 97.2 30 ........G........................... GCACTAGCGGCTTGGGCTTGAGCACTTATC 1740 36 100.0 30 .................................... CCATGCAGGTCCGCCATTATGGCCGATCAA 1806 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC # Left flank : GCACCTCAAACGGATCGAGCGCAATCTGCCCGAAAAAGGCGAAATCCACGTCCTGACCTTCACGGACAAGCAATATGAATCGATCGTTCGATTTTCGAGCCAACGCCGAAAGCGCCCGCGGAAAAACCCCGATCAATTGGCGCTGTTTTGATTTGGATGCGGTCTTTTGCTTGACCGGATACGGGGTTTTGTCGTTTCAGAAAAACGACTTAACCTCGCATCCG # Right flank : AGCCAATGGTCCACTACGCTTTTCCGAGTGCATCGCGGCTAGGGAAGTGACGATCGGCATTTCCCAAAAGAAAAGCCGGCTCAAGGGCCGACTTCGTTTCTAATTTGAAAGGGTAAGGGCGCCCGACCCACCGGCCGACGATCGCTACGATCGCAGGGCCGTCAGGTCGGACGCAGTCGGGATTACCAGGGGCGCAGGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ACGCTAGCAGTTCAGAAATCGCAGGCCAACCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 212047-212884 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000002.1 Nostoc sp. CHAB 5844 NODE_2_length_330294_cov_77.909603, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 212047 37 100.0 38 ..................................... ATTAAATTTTTCAGATTTAATTACAGTGTTATCTTCTG 212122 37 100.0 33 ..................................... GAGTGCGATCGCCTGGTGGGATGCGATTATTCA 212192 37 100.0 37 ..................................... AGTTCATCAGAGATACTGTAGCTGTAGAACCGTTGAA 212266 37 100.0 34 ..................................... GCTGATGCACTAGAGACGGTAGATATAGTTTGCC 212337 37 100.0 37 ..................................... GAATTTCTGCAAATTCACCCAAAACTTCAATATTTGG 212411 37 100.0 35 ..................................... AAGCCAAAATGCGAACAGAGGTATTAAATACAATG 212483 37 100.0 35 ..................................... GATTAATAGCAAGGATTGCGTCTTTGCAAAGTTGG 212555 37 100.0 34 ..................................... TCAAATATAGGAAGTACTTTTACTATTGCAGCTT 212626 37 100.0 38 ..................................... TTTACGATTTTAGGGTGGTTGACGCTGCTAAATTTAAA 212701 37 100.0 34 ..................................... CGGCTAAATCTGCGCGAACTAACAGGCCCCTCAG 212772 37 100.0 39 ..................................... GAATGCCAAAACCAAAACCAAAGCCAAAACCTAGCTCAA 212848 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 100.0 36 GTTGAAATTTCAAATAATCCCTATTAGGGATTGAAAC # Left flank : AAAGAAAGTTGTTGTCTCCTACGATGTCCCAGAAGACAAACGTCGCACCAAAATACACAAAATCTTGAAATCTTATGGGCAATGGGTGCAGTATAGCGTGTTTGAATGCCAGCTTACCGAGACTCAATATGCCAAATTGCGATCGCGTTTGCACAAATTAATTAAACCAGATACCGACAGCATCCGCTTTTACTTTCTCTGCGCTTGCTGTTTTGATAAAATCGAACGTATCGGCGGCGAACAACCCCGTGACGAAACCATTTTCTTTGCCGAATGCGCGGATGGGTAGGTGTAAAAATTCAAGCTTGAGGAAAAATGGCTGTATTCCTTTTAGTACAAGCTTTTAGAGAAAAATTAAATTAAAATCATCCGCGCACATTGTACAGTCTGGGTTTCAGCCATTATCCTTAAATCAATTGACATTCTCTACTGTTATAATCTACCCATCCGCGAAACTGAACCTCGAAAACCAAATACAGACCGTCTTTCCGGCTCCCGCT # Right flank : CAAAAATTGCAATTCCTTCAGGAGTTGTACCAGAAACAGTTTAAATTTCAAATAATCACTACTAAATCTCTTGCCTGAATCTTTTAAGTTTTAATGATTTTTCTGCCAATAATTGATTCCTTTTCATCTTTTATCAAAAATTCAGATTTATTAATTTTAATTAATTCATACTTTTCTGTTATAAACAAAGACATGACAGTGGCTATTAGATTTGCGAGATAAATTTTAGAAAATATCGGCAAATGAAAATTGAAAATTGATTCAGGAGCAGCTTTAACAATTAAATGTAATCTTCTGTCATTTACATACCATACGCCAGTAAATTTATCACCTGTAAGCAATTCTCTAGGTTTAGATAAAACAAATGTTTGAGTTCTAGTTTGCCGATAAGTCATATCATCTTTAAATTCAATAGAAATTTTTTCCCACTCTTTATTAAAACGCCATTTTCCCAGAAGTAAAATTTCTATTTCCGTATCAGAAAGATTTATATCACTCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCAAATAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 12764-14036 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000045.1 Nostoc sp. CHAB 5844 NODE_45_length_60354_cov_76.188869, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 12764 37 100.0 36 ..................................... GGGATAACAGGGCATAAATTCCAAAATTCTGGTCGA 12837 37 100.0 34 ..................................... TCTACCTTAGCTTTTAATCAAGTTCAATCAATCG 12908 37 100.0 34 ..................................... GCAGTCGATTCTGGTGTAGGGTCAGGTGGGTAGA 12979 37 100.0 41 ..................................... GTTCTAAAGAAGATTGCATTAATGATATTTTGGCGGCTCAA 13057 37 100.0 34 ..................................... GGAAGGCAACTTAATGCAGAAGAATGTTGTTTAA 13128 37 100.0 37 ..................................... TGGTAAGTGGGGAGACACGAAGTTTAAAACGACAGTG 13202 37 100.0 35 ..................................... ATCCCAATTGATGGGGAAATCGATTCTCGGATCGT 13274 37 100.0 35 ..................................... CGCGAATTTGCGCGAGATATGGATGTCTCGTTGGG 13346 37 100.0 34 ..................................... GGCATACCAAAAATGGCTAATCATATACCAGAAC 13417 37 100.0 35 ..................................... GAAAACCCCGAAAATTGCCCACAGATAAAATCGTT 13489 37 100.0 39 ..................................... GAGGACGGCTGCAAGGAGTCGGCAAAGCTTCAGCTTAAG 13565 37 100.0 36 ..................................... AATTTTGTTGATAAGCGCGATTATGAACTTTACTGA 13638 37 100.0 35 ..................................... AATCCCAACTTGTAGGCATCAGGATAATACTCAGA 13710 37 100.0 37 ..................................... GGTAAACGAAGCGCGAATTAATGCTAATCTTCCGCTG 13784 37 100.0 34 ..................................... TTTTAAAAGTTGCTACTAAAGCTTTAATAGGTGC 13855 37 100.0 37 ..................................... TATGTTTATTTAGACCACCTCTAGGCTTAGAGAAAGG 13929 37 100.0 34 ..................................... TTGGGAACAATAACAGAATCCTCCTGAGAGTTTT 14000 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 100.0 36 GTTTAAACTTAACTAAATCCCTATTAGGGATTGAAAC # Left flank : GTTATCAAAAAGCTGTCGCCGCCACTACAGCAGCAGATGTGCAAAGGGTAGCCAAGCAATATCTCAAACCAGAAAACTTGGTAACTCTGGTTGTCGGAAATCAAACTACCATTCAACCGCCATTGACAGGTTTAGCAAAACAAGTAATACCCATAGATGTAACAATTCCTGGTTCACCATCACAAGCGAAGAATTAATCACAATGTAATATCTAGATACCCGACTTTTAAAAAAAGTCGAGTATCTGGACACCAAGACAAAAATCCCTCAAAATGCGCGGATGAGTAGGTGTACAAAATCTCTCTTGCAGAAAAAACGCTGTATTCCTTTCAGTACAAGCTTTTGCCGAAAAATTAAATTAAAATCATCCGCGTACTTTATCCAGCCTATATTTCAGCCATTTTCATAAAATCAACTGACATTTTTCTCATGTTAAAATCAACCCATCCGCGAAATCGAACCTTGAAAACTAAATATAGATTGACTTTCCAGCTTCCGCA # Right flank : CAATCGCACAGTACGACGTAAAGCTTCTGAATTCTGTTTTGATGAAGATGCGATCGCTACTGCAATTGTGCGGAGTAATGAAGCTCCCCAATTAGTAAATACCGCAGAAACACGGTTTGCTCAACTTGTGCATTTCAGTAAAACTGCATTGTACAAGTTATGGAGGTGGACTGATGACTGATAGTGCAATGTTAAATATGCGAGTAACCCAGCAAACAGGTGATGAACCGTTAGAAACAGCTATAGCAGCAACAGAAGAAGAGTCAGTATTATTAGCGGAGAAACTCACGCAAGTTGCAATTCCTTTAGAAGTATTGATGCAAGCACTGAATATAGCAAAATATGATAAGGCAGCAGCTTTCCGTTATGCTGACCAGTATTTAAACAAAACCAAAAAGCGGAAATGGATTTTAATAAAGTATTTGATCAATGGGAGCGATCGCCATCGGCAAGCAATGCGATCGCCTACTCAGATTGTTGGGCATAAAATTTGTTGATGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTTAACTAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 1 6082-4944 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000046.1 Nostoc sp. CHAB 5844 NODE_46_length_58290_cov_78.085415, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 6081 37 100.0 34 ..................................... CCAAAAAATCGCTGCTTTGTTAGGGCAGATGAAA 6010 37 100.0 41 ..................................... GCGTTCATTTAATTTCAAAAACGGTCTAACTGCATCATCGG 5932 37 100.0 38 ..................................... TGGCTGGAGTGCTGAGAATATGCCAACGCTCATCCAGG 5857 37 100.0 38 ..................................... CTAGATGCTCGTGGATAATCTTAGAAAGATACTGAGCA 5782 37 100.0 37 ..................................... GATAACTTCTCCTACACCATACCTTCCTATTGCTGTT 5708 37 100.0 36 ..................................... ATATTTGCTGGTACAAAACAAAATGGTATTGGTTAG 5635 37 100.0 36 ..................................... CTTCAATGGCAGCAATGCGCTGTTCAAGCGCTTTGA 5562 37 100.0 40 ..................................... AAAAATTCTAGGCATTTAAGCCACGTTACCAGACTTTAAA 5485 37 100.0 34 ..................................... TGGCATTACAAACAAGGCACATTACCAGTAGCAG 5414 37 100.0 37 ..................................... TCAAAAATTGCAAAATGCTGGAATATGATATGTGGAA 5340 37 100.0 36 ..................................... TTTTGAGAGTATTTAGCCTAAGAGAATCACCCCAAC 5267 37 100.0 36 ..................................... ACCCTACCCGATCAAGAGCCATTTGAGGCGGGGACG 5194 37 100.0 34 ..................................... CTTTAGTTAGAGGTACTTGCTTGCTTAATTGCTG 5123 37 100.0 35 ..................................... GCGATTGATTTAGGATGCAATGATGCAATTGCTTG 5051 37 100.0 34 ..................................... ATAATAGCCCCCGCTTCGCTGGCAGGGGCAAAAA 4980 37 97.3 0 ........................C............ | ========== ====== ====== ====== ===================================== ========================================= ================== 16 37 99.8 36 GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Left flank : AGAATTAGGCGGAGAAATTCTTAAGCTTTGTGTGAAAGTTGGTGGTAGTCTTTCTGGTGAACATGGCATTGGCTCAGATAAAAAGTGCTATATGCCAGAAATGTTTAATAGCGTCGATTTAGAAACAATGCAATGGGTAAGACAAGTATTTAATCCCCAAGGTTTAGCTAATCCTGATAAAATATTCCCCACACCTCGAACTTGTGGCGAAGCCGCAAATGCTATAAGTCACAAGCAGTTTGAAGGTGTGGAAAGATATTAAGTAACCTAGAAATGCGCGGATGGGTAGGTGTAGAAAATCAAGCTTAAAGAAAAATCGCTGTATTCCTCTCAGTACAAGGTTTTGCAGAAAAATTAAATTAAAACTGTCCGCGCACATTACCCAGTCTAGATTTCAGCCATTACTCTTAAATCAACTGACGTTTTCCAGTGTTATAATTATTCCATCCGCGAAACTGAACCTCGAAAACCAAATATAGACCGCTTTTCCGGCATCCGCA # Right flank : TGCATCTTCCAACCATGAGGAGTTAAGCTGCCAAGGTTGGGACGGTCTACTACTTCTCTTAAGATACAAGATTGAGTTGAGGTATGAAACCCAATATCCAAAGAACTTGGCATTGTTGGGTTTCACTTCGTTCCACCCAACCTACCTTTATTTTTCTTCTCTAATTTTCCTCCGTTTTTAAGGGGGCTAGAGAGGATCAATCAGTACTTAAACTCACAGACAAATACTTTACAAACAACTCTTTAGAGCAAGTCAGGAATCAAATAAGATTGCTATACTCCTGAAGATGCTAATTTATTTTGTAGTTATAAATGTTCTTTTAAAACGCAGTCAAACCCACTAATGCATCGGTTGGCTAAACATTGGATTATTTACTTAATATCTTTAGAATTTATACTTTGTTTAACAGTATTTTCTCTACCTTCTTTCTCATTTTATTCTCGACCAAATAGCCAACAAATCATCACAGAAATTCGTGGCGTTTGGCTAACTAATGTCGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 26302-27634 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000046.1 Nostoc sp. CHAB 5844 NODE_46_length_58290_cov_78.085415, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 26302 35 100.0 34 ................................... GCTTCTCAGTAGAAGTGGAAGTACGATTTCACTG 26371 35 100.0 38 ................................... TTGATGACGGGGAGGGAGGCCGCTATTGCGGCGAATGG 26444 35 100.0 37 ................................... TCTTTTCTCTGTATTCTTTTTGTTTTTTGCAGGCCAT 26516 35 100.0 39 ................................... TATTGTAATAGCTGTTGCAGAAACGGTTACTGTACTACT 26590 35 100.0 40 ................................... AGCAACATTGTCATTTACTAAGGATAACGGCATCGCAAAA 26665 35 100.0 39 ................................... CCTCCAAATTCGCCCCTCGGCGAGATTCCCGGCCTCAGT 26739 35 100.0 35 ................................... ATAGATGGGAAACTGGTTTGCCGACTTAAAACCGG 26809 35 100.0 35 ................................... AGAAGCCTTGGAATGGCTAAAAAAGGAACATAAAA 26879 35 100.0 38 ................................... GAGGTTACTCAACCCAACTATGTGGAGGCCATTCGGAA 26952 35 100.0 37 ................................... GTTTTCAATCCTCAGGTGCGCTTTTTGCCAACACCTT 27024 35 100.0 36 ................................... GTGGGCGTGTGGAAACCCAAGGCGCGACTACGAAAT 27095 35 100.0 37 ................................... TCTCTGGCATTGGCTTTTTCTGACGGCATATAACAAT 27167 35 100.0 35 ................................... ATGGTTTCGCTCGGTATACTTCTTGTATATCGAGT 27237 35 100.0 36 ................................... AAGCTATTTCAAACTGTGAGATTCACATATCATAAT 27308 35 100.0 37 ................................... CCTTAGCCACCGCTGATGAAGTTGCCGAAGCCATTAA 27380 35 100.0 39 ................................... CCCAAAACCACGAGTTCGTGTCGGAAGCAAACTTTTTGC 27454 35 100.0 36 ................................... TGGTGGTAAGAAGTCTGCGGAACTGCTTAAGGAACT 27525 35 100.0 40 ................................... GTCTTTCAGTTGGGACAACAATCCACATTGTAAGCGTTAA 27600 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 19 35 100.0 37 GTTTCCATCCCCGTGAGGGGTAAAGGAATTAAAAC # Left flank : TGTTTGTTTCCCTGTTCTAGAATATCTTGGTAAATTACAGATTCTTTCATGATATCCTCTCTTAAAAATGTTCAATTTTTATACCCTGGCATGACGCTATTTTTACAACTGAGCAAATACTTTATCACTATTAATAAATCCGATCGCGGTAGAGCATCATCACCTCCACCTGCTCTTACTGGCTGACATTTCATGCGATCGCTCAATATAGCAGTTCTCGTTTGCATGAAATAGATTTTTTCACCTCACCCCCAACCCCTCTCCTTACCAAGGAGAGGGGAGTGTTTGCGTTAGCAAATACGGGGTGAGGTGACGACTGTATTGCACTCTCAGTGAGAACCGCTATATTGTCAGACAGATTTTGACTGGCGATGAGTAAATCCGATCGCGGTAGAGCATCATCACCTCCACCTGCTCTTACTAGCTGACATTCCATGCGATCGCACTGTCATCCACTCTACTAAATCATTGCTTAATGCGATCGCACTTACTTCTTTTTT # Right flank : CCCTACCCTTGTAGAACCATTACTACAAAAAGGTTTGAAGGTGCCATTTTAGCGGGGGGTACATTTTACCTGTCAATAAGCGCAAATTATTGACAACTATGACTCATGCACCCTATTGAAACCCTTATACAGTAAGCGATTAGCGGGGGTCAACGAAATCATCAGGGTTTCAGGGATCGGTTTACCCCCGCTAAAAACTTACGTGTACAAAGTTCAAACAAATACTTTTGCTTTCACTTGGAAACGTAAGATTAAGTTTTCAAGGTTCTGTTTTTGCATCCAAGAGTATAACAAAGTACCGTGGACTTTTGACAACGTAAACCGCAAACTTAACATAAGTTTTCTTGGCTATCTCTCCCAAATCATCGGTCGGTAAACTTCCACTTCACCCTTCAAGCATGAGATATATTCTCGTACCTGCAACTCAAGAGCGCGACGGTAGACTACTTTTTGTCCAGTATGAGGGTGCGTCACTTCTGATTGCAATCTTTCTTCCCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTGAGGGGTAAAGGAATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 22022-20315 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000073.1 Nostoc sp. CHAB 5844 NODE_73_length_32512_cov_77.563718, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 22021 37 100.0 34 ..................................... GTATCTGCAATGATTGGCGGATTAGCCGTCGGCG 21950 37 100.0 35 ..................................... AAAACCTTCTGGTAGTGTCATTAATCCTCTCCGTC 21878 37 100.0 35 ..................................... GCGGGTGCAAGAATCCCCAAAGGAACTATTACCGA 21806 37 100.0 43 ..................................... ATGTGGGTAGTTTACATCGTCAGTGCTGCGGCGCTGGCTTTGG 21726 37 100.0 39 ..................................... TTGCAGCACTACTGCCACCCAGAAGTGGTTAATGCTGAA 21650 37 100.0 37 ..................................... ACTGTTGCTTAACCCCATCAATCACAGTATTTAATTT 21576 37 100.0 36 ..................................... AGGAATTGGTAGAAGCTCAGGCAGAATTAATGCTTG 21503 37 100.0 35 ..................................... CCTAGTCTCCCCACAGCCGGTACAGATTTTTCTTT 21431 37 100.0 35 ..................................... ACGAAGCTCTCTTCAGCCGCATCTCTGAGTTTTCG 21359 37 100.0 35 ..................................... GATGTGGCTAAAAGATTGAAATTCACCATCTGTAG 21287 37 100.0 33 ..................................... CCGATATTCGGCATCTAGTATTAATTTAAAATG 21217 37 100.0 35 ..................................... TTTCACAACTCCAACCTCATCAAAAATTTGTTTAA 21145 37 100.0 40 ..................................... TGAGCAGCTGTTAAAGGCTGGGTTTAATCCAGGAAGTGTG 21068 37 100.0 34 ..................................... TACTTAGCAGTTTATAGTAGAGTGAAAGGAGGTG 20997 37 100.0 33 ..................................... ACATCATCCGACCATCCTAGGCACGGCGAAGAA 20927 37 100.0 36 ..................................... TACTGATTGTTTGCGAAGTTGTGCTTCGCGGGTGGC 20854 37 100.0 37 ..................................... ACATTTTCAGCGCCGCCAATCTGCCCAAGAATACGAT 20780 37 100.0 35 ..................................... CAGATCCCCAAAATCTACGCTTTTTCAAATCCTTA 20708 37 100.0 35 ..................................... CCGTCTTCTGACGGGCCTGTTAATTCCCGCAGATT 20636 37 100.0 34 ..................................... TGGTATTGAGTAGACATACAAATGGTTCGGTGTC 20565 37 100.0 35 ..................................... ATTAATTTGAAACAGTTAACATCATCTTGTACCCT 20493 37 100.0 34 ..................................... TCAAACCCTGCGCGTAGTGTTTTTAAACACGGGA 20422 37 100.0 34 ..................................... CTTTGCTCCAGTAAGAACCAGCTAAAAATAGATG 20351 37 91.9 0 ..................T............GA.... | ========== ====== ====== ====== ===================================== =========================================== ================== 24 37 99.7 36 GTTACAATTTCTCTTAATCCCTATTAGGGATTGAAAC # Left flank : ATTTGTAGCAATTTGACTGGAAATGTGCAGCAAATCCTGATACGTAAATGCTCCTGCATCGGTAAAAATTGCTATTTTAGCGTTATATTCTTCAGCACGAGTAATTAAAGGGAGATTCACTTTTCTTTACCAATTTATGCTTGAGTCAGTCTAATTACTGAAAGCATATAGCAATCTCAAATATTTTTTTGAACTGTTTAGCCGACCCTTACCTTTGTGGTTATGATAGGAGCAAATAAAAATCAGGCGATCGCAACAATAGTTTTTGGCTAAATGCGCGGATGGGTAGGTGTACAAAATTGGATTTGGAGATGAATTGCTGTGTTCCTTTCTGTATAAGCTTTTGGAGCCTAAATAAATTAAAACTAGCCGCGCGGCTTGCTCAGACTGCTTTTGGGACATTTTATGTAAATCAATTGAAATTTATTAGTGTTAGAATTAAGCCACCCGCGCAACTGAACCTCGAAAATCAAATACAAGTTAGCTTTCCGGCTTCTGCC # Right flank : ATTCCAGCATGATGAAGAGCCGCAATGCGGGTTTCAAACTCTTGATGTTGCGTTAGTCCGCGCAGGCAAACTTCGTTTGTATAGCCGCGAATTCCATTCGTCAGTGCTAGGCTTACCTACCCATCTGCCTCTGCTATAACTGGAATTATGCGATGGCGATTTGTAGTACTAGAAAAATCAACTTCCCCAATTAATGATGGATGACGACTTAACCAGTATGTAGATTTGAGATAACCTGATTCCAATTTCATTAGTGGCAGATTATGCTTTTCTAACACCTTTTGAATTCGCTTAAAAGCTTCTGGTAGTTGGTTGAAGGGAATATCAGGAAAGATGTGATGCACTGCATGATAATCTAGCCCACCCATTAACCAACCAACTAGAGAACTAGTCGCAATATTACGACAAGCATAAAGCTGCGTTAATTGGTGAGAAGTAAATTTACCCCACAGCGCGTAATGTTCCAAGTGGTCGCGTGTCTGCGCTATGATGCCAATTAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAATTTCTCTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 4193-5974 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFW010000139.1 Nostoc sp. CHAB 5844 NODE_139_length_6274_cov_78.392224, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 4193 37 100.0 36 ..................................... AAAAAACGCGCTGATGCTGCCACGGCTCGACACCTC 4266 37 100.0 35 ..................................... TTCCTGTCTTGGAGCTAAACACCAAGTCATGAGGC 4338 37 100.0 35 ..................................... CATCATCTCGATTGCCAGATGCAACGGAAATTAAA 4410 37 100.0 42 ..................................... TATTTACTGCGGTTGATAGTAGACCTGATTTATCAGCTACAA 4489 37 100.0 35 ..................................... ATCATCTGCCGCAGTTTTGGATTCAGCACGAGAAC 4561 37 100.0 40 ..................................... GCTAACTCTAAACTCAATGACGTTTAGCGGCGGCTGACAA 4638 37 100.0 31 ..................................... TTAATTTTGTACATAGTTCCGGTGTTGTTTA 4706 37 100.0 34 ..................................... GTCCGCCTCAATATACAAAGGGCATAGTGGCTCG 4777 37 100.0 35 ..................................... GTATATTATATTGTATAATCAACATAGTCAATAAA 4849 37 100.0 34 ..................................... CACCACCACCGGGGAGTTTTTGCCATTTGTAATG 4920 37 100.0 33 ..................................... GATTGCTTTCCAAGCAGCGCAAGAAGGGATAAG 4990 37 100.0 41 ..................................... TTGATGGTTGTTATAACTGCCCACATTGGAGAACTAATAAA 5068 37 100.0 36 ..................................... GCGAGTAAATAGCTTGAGTTTGACAGAGTTACCCCG 5141 37 100.0 37 ..................................... TTGATATTTAGGTATAGGCTCACCGCGATACCGCATT 5215 37 100.0 35 ..................................... CAGATTGAAGATTGTAACTTCATTGACGACAAAGG 5287 37 100.0 36 ..................................... TACCATGCAGGGCGCGATCGCTTTGGCGGAATCGAG 5360 37 100.0 36 ..................................... CTTCATATGGCACTACATCAGCAAGCCAATCACACG 5433 37 100.0 35 ..................................... ACGCCGATATAACGCTGACGACGGAAACCAGTTTT 5505 37 100.0 35 ..................................... AATTTCTACTTCTGTCCCCAAACCTTCAGCTATTA 5577 37 100.0 36 ..................................... CGACTTTCATCAAGACGTGCTTCTAATCGTTCTTGA 5650 37 100.0 35 ..................................... GAAAGGAGAAAGATGATTTATCAGTTATAAACACG 5722 37 100.0 34 ..................................... TCTTACAAAAAGAGTCCAAGGGGATAATGCAAGG 5793 37 100.0 36 ..................................... CTGGCTAATTATGCCTGGGATGATGTGGACAAAATT 5866 37 100.0 35 ..................................... ATGCAGGACTCAAACAGGGATTTAAGCTCATTGGA 5938 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 25 37 100.0 36 GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Left flank : GCCACGCCAGTTCGCTCAAGTCGGGAAACCATGTGCGGCAGTCGCTCATGGGGGAAACCACGCCAGTTCCTACAACGGGGGGAACCCCCGCAACGGACTGGCTCCCCAAGACCGCGCTGCCTCACCACGCGACTGGCTCAACTTTGCGCTTTTAACTTTTTACTTTTGCCTTATTTGGTGATGAGTATTCTCATCCGCCAAATCTTGATTTAATATCTAGATACCCGACCTTTTGAAAAAGTCGGGTATCTAAACACCACAAAATTTCTCAAAATGCGCGGATGGGTAGGTGTAGAAAATTGCTCTGGAGAAATAATGGCTGGATTCCTTTGCAGACAAGCTGTTGCTGGAAAATTAAATTAAAATTAGCCGCGCACCTCACCTAGCATACATTTCAGGGATTTTAAGTAAATTAACTGACATTTACTCATGTTACAATCCATCCATCCGCGAAATCGAACCTTGAAAACTAAATACAGATTAGCTTTCCGGCTTCCGCT # Right flank : AGAAGTCCTCCAGTGCTGACGACACTGGAGGCGCATTTATGTTGAAATTTCACTTAATCGCTACTACACAAGCGAAGTCCGCCTACGCGGACTAATAGAGAATTAAGGTTTTTGAACCCGCGTAGGCGGTCACTGAGCTTGCCGAAGTGCGGGTTTTGTCTGTGTAGCCGCGACTTACAGCAATTTTCAGGTAATTGAACCACAAACTACGATAACCTAAATATGAAGTAATTGTTTGATTCGATGCCAGTATCTTACTCCGAGGATTTGCGTCGTCGCGTGATTGCAGCTTGGTTAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //