Array 1 8083-8294 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVFI010000022.1 Streptomyces sp. JJ66 scaffold22_size52554, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8083 29 100.0 32 ............................. TGGCCGGGCCACTTCGCGCGCTACTGCACGAG 8144 29 100.0 32 ............................. GACGTGATGCCCTCACGTGCCCACCGGCTCAT 8205 29 100.0 32 ............................. TCACCCGCGCTCAGACCGGGGCCGCGCGGGTC 8266 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGCTCCCCGCGCCTGCGGGGGTGGTCCC # Left flank : TGCCGGGCATGGCGATATGTCCTCACTCAGGGTCCTCGCCCTGGCTCGACGTAACCGGCGGTGAAAGTCTCCTGGCTCCCGGATCTACACGTCCCCCGGCCTTCCAGCCTCGCGTGAGGCCGTGACATCGGGTGGGGGTGTGCTCCCCGGTGACAGTGGCGGGACCGCGCCGGACTCGCACCGGCTTCCTCTCCTGCCGCCGTTTGGCACCGGGCAGTCCACCACGCCCGGCAGAGGCCGTCAACTCCCCGCTGACCTGCGACACCACCAAGTTGCCAGACTCACACCCTGGCTCTGAGACCCCCACCGCGCCCCGCCCCGGCCGCCTCAGCCCCCTGAATCCGGCGCGAAACACCGCGCGGCTGGAGTGTGAGTGGCCACGACGGTTAGGGATACATGAGAACTCTTTGGCGCCTATGCCCCACAGGAGCTGAATGCCGGTTTCTCGGGAAGTGAGTAAAAACCGCAAGGCGACGCGATAAAATCGCAGCTCACGTCCT # Right flank : TTTGCCGCCGCAGGTTTAGATGCGTCAACCGGACGCCGACGCCTCACCGATCGCGTAAGCGTGCGTTGCTTCGCCTTCACGGGGGCGACAGGAAGTGCGGTGTGTCCTCTGAGAGAGCCACCGCCCCGGCCGTGCTGAGGCGGGGCGTCTCCGTCACCTGCGGGAGCGTGCCGAGTACACCGACCATGCCGAAGTCATCGTTTCCCGTGACTGTGGGGGTCAAAGTTAACGACGTAGTAGGGGTTGCCGCTGAGGTATCCCCAGGGCCTCTGCGCGCTCTTCTTGTTGGCGTTACGGTGACGAGCATGAATGGTCCTGAGCTTCCCGACAGCGTTGAGGAATCCGAGGCTTCCCAGCTGTTGGGTGAATTGCTGAAGCGAGCAGAGGGCGGCGGGGCAACGGTAGTCACTCGCCACGGGGAGCCGATCGCGGCCATCGTGTCCATGCAGGACTACGAAGCCGCCGAGAGCGTGATCGATGAGGCGCTCGCAGCCAGGACG # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 110223-110020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVFI010000002.1 Streptomyces sp. JJ66 scaffold2_size363742, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 110222 28 96.4 33 .C.......................... GTCTTCCCGGCTGTGGCGCTGATGGTCGCGACC 110161 28 100.0 25 ............................ GTCCCCCAGGCCGTCCGGCCGCCTT 110108 28 89.3 33 .......T.....C...A.......... ACCGTGGGCTGCCGCGAGCGCGGCCCTGGCGGC 110047 28 89.3 0 C............C.............G | ========== ====== ====== ====== ============================ ================================= ================== 4 28 93.8 31 GTCGCCCCCGCACACGCGGGGATGGTCC # Left flank : CCGCAGGGCAGTCCCCTGTAGCTCAATTGGCAGAGCAGCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAGCACACCACATGAAGGACCCCGCCAGGGGTCCTTTTTCGTGCGCTTCCCCGGATCGGGAACCGCCCGGGGGTGATCGATGTCTCAGCCACCGAAGGCAGCGGCCTCATCCAGGCGGGAGATCGTATAACGGGCTATGCTGCGGCAGACGGCGCGCAGCGACGTGCACGACGCGCCGAACGGGGCGGTAGCTCAGCCGGTTAGAGCAGCGGACTCATAATCCGTCGGCCGTGGGTTCGAGTCCCACCCGCCCCACTCAAGCTCCCCACCCGGCAGCCCCTGCCCTGGGTAACGAGCCCAGGGAAACGAGGCAACGGGTCCCGCACCACCCGTTCGAAGCTCGCCCCCTTCGCCACCCCCGGCGAACCCAACCGAACGAAAAAGACCACCCCACCCGCTAAACTCCCAGCTCAACAAGC # Right flank : GAGCAGGAGTGAAAGGACAATGAGGGCCAGTCGAGTGCTTTGGTGATCGTTTGCTGGTCCGCTGCTGACCTGAGAGCCTGCCGAGCATGGAATGCCGAAAGTCCGGCCCCGCAGGGAACCGAGCTTTCGGCGCTCTGTCAGAGAGTTGGCTACTCCTTGGGCGGGACCACGAAGCCCCGCGTGGGGCCGGACGGCGGCGGGTCGTCTTCCGGGAGGCGGCCCGCCACAGCCGCCAGTGCGGCGGCAGTCATGTCCGTGCGCGCGTGGGGGTCGGCCGTGTCGTAGACCCGCCACTCGCCGGTGGCGTTGTCCGGGTCGATCGGCGCGACCACGCCCTGGATGCCAAGCTTACGTAGCAGGGCCTCCACGCGCCGGGCCTCGTCCGGTCCCATCGGTTTCCCCTTTCGGCCGAGATGAGTTTAGCTGTCGTTGCCGCTCGACCCGCCGGAGCAGTGGGAGGCGCAGCTGCCTGGTCGGATCGGCCCGCAGCCGCCTGGTTT # Questionable array : NO Score: 3.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:-0.14, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCGCACACGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCACACGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 280458-280307 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVFI010000005.1 Streptomyces sp. JJ66 scaffold5_size293034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 280457 29 100.0 32 ............................. CTGTGCGCCTGGGGCTGTTCGTCTGTGTCCGG 280396 29 100.0 32 ............................. CTCCGCACGGCTGTCGGCGCGGTGGGGGTGAC 280335 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 CTGCTCCCCGCACACGCGGGGATGGCCCC # Left flank : CGCCCGACAAGTCGGCGGAGTTCATCTCCCACATCATGGAGCAGCGCTATGGACCTGGCCCCGAAGGCGACGATCTGGCGTAAGTCCAGCTACAGCGACGACGAGAGCGGCGAATGCGTCGAGTGCGCAGCAATCCACGGCGCCGAGTGGCGGAAGTCGAGCCACAGCGGTGATGACGGCGGCGCATGCGTCGAGGTGGCGGACCTCCCCCACCGGATCGCCGTCCGAGACTCCAAGCGCCCGGACGGCCCGGCGTTCACCGTCTCCCCCGCCGCCTTCACCGCCTTCACCCGCGCCACCGCAGACGCAGCACTACACCCCCACACCCGCTGAACATGACCGTCGAACCGCTCCCAGCCTGGGTAACCCCGCCACCCCGGGGCTTCACAGCCGAACACCCATCAGCACACCAAGCTAGGGCAGCTATGGGCGTTTTGCCGGAGTCAGCGCAAGTGAATGAAAACGCGAACTCCCCGGGATAAACCCCCAGGTCACGCCCT # Right flank : TTGTGCTGATCACAGCGCAGGCCCGCGACGCCTGTTCTCGCGTGCGGGGGTTGTGGCGCCGCTCGTTACCAGGGGGTGGTGAGGGCGCGGAGGGTGAGGGCTAGGCCCACGAGGACGACGAAAGCGGCGGTGAGGGGGGCGCCGAGTCGGCTCACGCGGCGCACGAAGCCGGTCTGGGGCAGGCGGGTGCTCCACGTGGTCACCGCGTGGTCCCGGAAGCGGACGAGCAGCACGCCTGCGGCGGTGAGGGTGGCGGCCATGCCGACGCCGTAGCCGAGGACGAGCAGGACGCCGAACGGGGTACGGCCGAGCGCGACGGCGCCGAGCAGCACGACGAGCGCGGAGGGGCTGGGCACCAGGCCGCCCGCGATGCCGATGCCGATGAGCCCACGGCGGCCGGTGCCTTGGCGGCTCTCCTCGGGGGCGGCGGATGGGGTGTGGGCCGCCGCGTCCGGTCGCGCCGGGGGCTCCGGCTGCTCGGTGAGCACCGCGACCGTGGA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //