Array 1 139954-139741 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000050.1 Streptomyces sp. SID4919 SID4919.c50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 139953 30 100.0 31 .............................. AGCACTCCAGCTTCCAGGACTGCGTCACCAT 139892 30 93.3 31 ............................GA CGTCGAAGGTCGCGTTCCAGCGGATCGAGGC 139831 30 96.7 31 .............................G CCGTCCGGCACACTCAAGGCCCCAGCGTCCG 139770 30 90.0 0 .......T...................GG. | ========== ====== ====== ====== ============================== =============================== ================== 4 30 95.0 31 GTGGTCCCCGCAGGCGCGGGGGTGGTCCCC # Left flank : GCCCTGGCCCCCCGCCCCGAAGCCCGCGGGGGGCCGTCCGGGCCGCGCACGCAGGACGCCGTGGCCGTGGCCGCCGAGACCCGCTCCAAGCCGGTGCTGCGGGTCGTCCCGGCGCTGCCGGGGCGGACTCCCGCGCCCGACGACGACAGCCGGGATACCGGGGCGCGGGTGACGCGGGACGGCCGCCGTCCCGCCCGCGCGGCGGCCCCCGAGGGCCTGTCCCCGTACCCGGCGCCCGCGCCCCTGACCAGCGAACCCCCGCTCGCCGACACCGTCCCGCTGACCAGCGAGTCCCCCTACACCGGAACCCTCCCGCTCACCAGCGAGCCCTCGACCCCCACGACGGCCTACGGCCAGGACCCCTCGGTGGCGTAGCGGGGCCGCCCGCCCGTCCGCACCCTCGTCGCTCGGCCGGTTTCCGTTGCCGTAAGCGGTGTGGGAGCGTGATGCGACCGAAGGGAAACGGCCCGACTTCCTGAAAGACCCCCAGGTCGGGAAGG # Right flank : TGTTCCGGTACCAGGCGTTCCGGTGCCGGTGCGCCCCGGCGCGCTCGGGTCCGTTCCGCGCTGATCGGACATGATCAAGGTAATTTCGTTCGCATTCGGTGGGATCTCGCCAGATCCCGCCCGATCCGAACGAAAGGCACCGGATGACCCTTGCCCGGCTCGCCGCCCTGTACGCGGTCGACACCTCGTACTCCCCGTCCCCCGGTCGTACGGTCACCGTGGCGGAGAGCGCCGTCCGCGCGGCCCTCGCCGCGCTCGGGGTGGACGCCGACGGCCCCGGCGCCGTCGCGCAGGCTCTCGCGCAACGGGAAGCGGAACTGCGGGAGCGGCTGCTGCCGCCCACCCTCGTCTGGTGGCCGGGCCGGGTCCCCGAAGCGCTGGCCGCGCTCCCGCCCGGCACCCGGGTGGACGTCGTCCCGGAGCCGGACGCGGACGCCGCCCCGCGCGGACCGCACACGCCCGCCCCGCCGCCCGGCGGCGGCCACGCCCCGGCCGGCTGG # Questionable array : NO Score: 3.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCAGGCGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 239765-240099 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000050.1 Streptomyces sp. SID4919 SID4919.c50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 239765 28 100.0 33 ............................ CCCGGGCAGCCGACGGGGCTTCCAGGCCGTCAG 239826 28 100.0 35 ............................ TGACATCGACCGATAGGAGTAAGCCAGTGCCACGT 239889 28 100.0 33 ............................ GAGGGTGGCGATCGGCGGGAGGTCCGAGACCTT 239950 28 100.0 33 ............................ GGCTGGGGCAGCAGGGCCTTCCTGGGGTCGATC 240011 28 100.0 33 ............................ CGGCACGGTGCGCGAGACGTACGCGTGGACGGA 240072 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 6 28 100.0 34 GTCGGCCCCGCACACGCGGGGGTGGTCC # Left flank : ACACGGGTACCCCGGCCAGCCCGGTGGACTGCTCCGAACCGGACTGCCGGGAGGAGGCGTCGACAGCCGTGGACGCGGCGGGGGTACCTGCGGAGGTACTCGCCCGCTGGGCCCGACGGGCGGCGGGCCTGGACGGCCCGAGACGGGTCCCGCGTTCGTACCGCCCAGCCCGCGGCCAGCGATCGGCGGCGGCGCCTCGGTCGACCCGCACGAGACTGCTCTGACGGCGGGCCGGGGGGGTATGGGGCGGCGCGCTTGGGCCTCGGGCCTCAGCGCCAGGCTGCACGGTCCGGTCCGCCGCGAGCAGAGGCAGCCGAAGCCAACTGATGCTGGTGGCCGCCACAGTTAGGACGTCAGGCTCGGGCTGTACCCTTCGCGGAAGCCGATCAGACGCCACGGTACGGGGCTCCCGTACGGGGGTACGGGAGGAGACGGTGGAGGACGCGATGCGACTAAAGGGAAACGGCCCGATCCGCTGAGAAACCCGCAGGTCAGGAAGT # Right flank : CGGTCTCGCAGTTCCCGTTCCGCACCCAGTCGAGAGTCGGTCCCGCACACGCGGGGGTGGTCCGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACACGCGGGGGTGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGCTGGTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 243947-244281 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000050.1 Streptomyces sp. SID4919 SID4919.c50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 243947 30 96.7 31 .............................T TGGTGTACGGGCGCTCGGGGACGAACTCGGT 244008 30 100.0 31 .............................. CGGAGAGGGGTCTCTTCCATTGCTTCGCGTG 244069 30 96.7 31 ............................G. GGCACGGCCACCCCTCGGGCTCCTCGCCGTA 244130 30 96.7 31 .............................G GGTTCCTGGCCGGCCTGAAGGCTCAGGAGAA 244191 30 93.3 31 ............................GC ACCTGGTCGCCGCCCTACACAAATTCACGAA 244252 30 70.0 0 ..GA.................CCCAA.AG. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 92.2 31 GTCGTCCCCGCACGCGCGGGGGTGGTCCCA # Left flank : CCGTCAAGGGCTGTACGAGACTTGTGGAACTCTCCGAGCGATACGCGGCGATGGCCGATTCACGCTCACCGTCGCCCACTCGGGCGGCGCGGCGGTCGGGTTCGGGTACGCCTTCCCCTGCTCGGCCGACTACTGGTTCGGACCGGACCTGGTGGACCGGGTCCCCGAAGCGGCCCGTACCGAACGGCTCATGGGGCTGTGCGAACTCGCAGTCCAGCCGGACTGGCAAGGTCGGGGCATCGGCTCCCTGCTGCACGCCGAGCTGATCGCGTCCGTCGACCCGCTCCCCGCGCTCTCCGGAGCGGGGCTCTACCTCGTTGCGCCCACTGCGCCGTGCAACGGACGGGACCAGGTCGGGTGTCGGTTGTATCCTTCCCGGGACGGATCAGGTGTACAGGTACAGGTGCCTTGTACAGAGGAGCGCTGAAGGTGAACGCGTGGGTGCGATGCGACTAAAGGAAAACGGCCCGTTCCGCTGAGAAACCCGCAGGTCAGGAAGT # Right flank : ACAAGGGCGCTTCCGGCTCAAGCAGGGCCTGACTCATAGGGAGTCCACACCTCCGGACCCCCGCCCCGCCGCTCGATCATCGTGCTCGTGGCGATCTCCGCAGGGTCGAGGTCCAGCCCCGCTCGGCGCAAGAACTCCGCTAGGCCGTGTTTTGGAAGTGGCTGGTGTGCTGGGCGGGCCGTCCGGAAGAGTCGCGGGCGACCATCCAGATCGTGAGGGCGCGGGCTTGTGATTGCCGCTGCGGCAGCTTCTACCGTCCTGAGCAGGGCCGGAGAAACCGGCCCGGTGACGCGATCGTGAGGGAGACAGCGATGGACTGGCCTATCGCGGAGGTCGCTCGGATGTCGGGCGTGACCGCCCGGACGCTGCGGCACTATGACGAGGTCGGTCTGCTGCCGCCGGCCCGGATCGGGGCCAACGGCCACCGCTATTACGAGGAGCATCAGCTTCTGCTGCTACAGCAAATCCTCGTGCTACGGGCGCTGGGCGTAGGGCTTCCC # Questionable array : NO Score: 3.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 250148-250543 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000050.1 Streptomyces sp. SID4919 SID4919.c50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 250148 29 96.6 32 ............................T GCGGCTACCGAGTGGGCCGTGTGGGTCCCGGG 250209 29 96.6 32 ............................T CCTAGCGTGCCAACGCGCTCGCCCGACAGGCT 250270 29 100.0 32 ............................. GTCGTGCTTCCGCCGGTGGCGCCGGACCCGGT 250331 29 96.6 32 ............................G CGGCCGGCCATCCGCCTCTGCGCGGCCTCGCG 250392 29 100.0 32 ............................. GTGAGGGAGTCGAGTACGGCGGAACTCTTGCG 250453 29 96.6 32 ............................A GTCGGCCAGTGGCTCAACAACCTCCGCAAACC 250514 29 75.9 0 G........A...C...A....A.C...A | C [250535] ========== ====== ====== ====== ============================= ================================ ================== 7 29 94.6 32 ATGGTCCCCGCACGCGCGGGGATGTCCCC # Left flank : CTGTCCGGCAAGAACTCCCAGTACTTCGACCGCGCGACGGCGGGGGTGCCCGGCTCGGTCACCCAGGGCGACGCGCTCGGCGGAGCCGTGCGACTCCGGGACGTCGATGGCGACGGCCGCGCCGATCTGCATGTCGCCGCCAACCAAGGCTCCTTGCGCCTGCTCGGCAGCCGCACGGGCGTCACGACCACCGGCATCAGGGGGATCGCCACGTACGAGGTCACCGGCATCCTCCAGTGACCCGGACCCACACCGACCCACACCTGTGGCTCCACCCCGCCCCGCTCGCTCCCTGGGGCGGGGCCTACCTCGTTGCCGCCACCGCACCTTGCAGCGGACGGGACCAGGCCGGGTGCCGGGTGCACCCTTCCCCCCGGAGCGGATCGGGCGGACGGGTACAGGTGCCTCGTACGGAGGAGCGCGCTGAAGGCGAACGCGGGGGTGCGATGCGACTGAAGGAAAACGGCCCGATCCGCTGAGAAACCCGCAGGTCAGGAAGT # Right flank : AGGCGCACCGCCACGCGAACGTTCACCGTGGGGTGGGGAACCCCGCGCACCCACAACACTCCCCGCCCCCTACAAATGCGTAGGCGCGAACATCCTCAACACCGCCGGGAGGACCACCACCGAAGGGCCCCGTTCCGCGAACGACTTCGTCAAGGTGGTGCCCAGGGTGTCCGGGGTCGCGAGGGTCGCGGGGACTCCGAAGGACTGCGCGAGGGCCACGAAGTCCGGGCGGGACAGTTCCGTGCCCGTGGCCTCGCCGAACGTGTCGGTCATGTACTCGCGGAGGATGCCGTAGCCGCCGTCGTCCACGATCAGCCACGTGACGTTCAGGTCGTACTGGCGGGCCGTCGCCAGCTCGGCGATCGAGTACATCGCGCCGCCGTCGCCGGACACCGCGAGGACCGGGCGGGACGGGTCCGCCGCCGCCGCGCCCAGCGCGGCGGGGAACCCGTAACCGAGGCCCCCGGCACCCTGCGCGGAGTGCATCGTGTTGGGCCGCC # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCACGCGCGGGGATGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 101737-102034 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000013.1 Streptomyces sp. SID4919 SID4919.c13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================== ================== 101737 25 100.0 46 ......................... CGGACGTACCCGCACAGGAACAAGTACGCCCAGCCGGGCGGACCCC 101808 25 100.0 45 ......................... ACGAACGACCCGCACAGGGAAACGCGGGCCAAGCACAGGACACCC 101878 25 84.0 37 ....................GAG.A GCCAAGGGCCATCCGCAGCCGAACGGGGCGCGACCGA 101940 25 100.0 45 ......................... GCGAACGACCCGCACAGGGAAACGTGGGCCAAGCACAGGAGACCC 102010 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ============================================== ================== 5 25 96.8 44 AGGGGCGCGGGGAACTGCGCACCCC # Left flank : GCGTGCCGCCGGGTTTTGTGTACGGGCCGCCTTCGCTTGCGCTTCCCAGGTCCGTCCGGCCTTGCGCCCTCCGTTCCTGTGCCGTCGCCCGGTGGGTTCGCGCGGTTCCCCGCGGGCCGCCTTCGCTTGCGCCTCTGGGTCTGTCCGGCTGGACGAACTTGTCCCTGTGCCGTCGCCCGGTGGGTTCGCGCAGTTCCCCGCGGGTCGCCTTCGCTTGCGCCTCTGGGTCTGTCCGGCTGGACGAACTTGTCCCTGTGCCGTCGCCCGGTGGGTGCGCAGTTCCCCGCGCCCCTTTGGGGCGCGTTCCGCTTGTTCTTCGGGGCGGGGCCGGTCGGGATTCTCCGTCCTCGATCCGACACGCTCGGTAACACGTCCAGTGACCCGACTGAAGAGCATCGGAGTCTGCGGGCAGAGATTCCCGCCCACCCCCTCCCGCAGCAGCGCGACTGCGCGAGGAGGGGGGTCCGCAGACAACGGACAACAGCAAGGAGTGCCCCTTC # Right flank : CACGAGCGACGGCACCGGAACGGAGTGCGCAAGGCCGGACGGACCTGGGAAGCGCGAGCGAAGGCGACCCGCCGGGGGTCACCGGGCCGTCGAACCCCGCACCGTGTCGAAGTGCGTCCGCGCCTCCGCCTCCCGCGCGGCGGGCCCCATCACCAGCACGTTGAAGAGGTGCGCGTCCGTCTGCCAGGCGAGATCGACACCGAACCGCCCCCCGCCCTTCTTCCCCGCCCCCTTCGACGCCGACTCCCAGATCCCGGCCGGATGGCCACGATGCGTGGTGGGCGTCACCACCCCCTTGCGGTCGCGGCCCCTGCCATGGTCCCGCCGCAGCGACTCCACCGGGCCACCGGGCTCCGCCGCGGCGACCCGGACACCGACGCGGATCGCCCCGTCCGGCGAGACATAGAACGTCCAGTGCCCCGCGTTCCTGCGGGTGTACGTCTGGGGGACGGCCAGCGACAGCCCGCCGTCCGCGTCGACCCGGCGGTAGCCGATGGGCA # Questionable array : NO Score: 2.70 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGGGCGCGGGGAACTGCGCACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [31.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 114195-113373 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000051.1 Streptomyces sp. SID4919 SID4919.c51, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 114194 29 96.6 32 ............................G ACGCTGTTCCTGGGCGGCGGCGCCGATGTGAC 114133 29 96.6 32 ............................G ACGACCGGACCCAGCTCGCGGCACTTCAGCTC 114072 29 100.0 32 ............................. AGCAGCGTGAACAGCAGCTCCTCAAGGACCGG 114011 29 96.6 32 ............................A CGCGAAGCCGCCGCGGTGCAGTTGTTCGGCAC 113950 29 100.0 32 ............................. CAGCTGGTCGAGCGGCACGTCGTGCTGCGGCC 113889 29 96.6 32 ............................G CGCGGGTTCATTAACGAAGAGGTCTTCCAGTG 113828 29 100.0 32 ............................. GGGAACGCCCGGCTCTACGGGATCGGGTTCCT 113767 29 100.0 32 ............................. TTCGCGGGCATTTTGGCTGCCGGATGGATCGC 113706 29 100.0 32 ............................. TCGCATTCCTGGCGCAGCCGTCCGGGCTGGGG 113645 29 100.0 32 ............................. CGAGCAGTACGGGGTTCCGCAGACCCGCCGCC 113584 29 96.6 32 ............................G GTGGCCCGGGCGATCTCCTCGTCCGTCTCGTC 113523 29 100.0 32 ............................. CGCACCGTGGCGACCACCCCGGCCGCCTGGGC 113462 29 89.7 32 .....................A..T...G AGTCGCGCCCTCTGGTGGTCGTCCATGACGAC 113401 29 69.0 0 ...........A.C.......CGCCCAT. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 95.8 32 GTCGGCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : GAGCCCCGCCGCGCGGACGGCGTCCGCGCCCTTCGGCCACAGTCGCTGATGGGACGGGGTCGCCTTTCCGCAGTCGTGCACACCGCACAGCCAGGCGAACAGCGCCCGGCCCCTTCCCGGTCCGCCCGCGAGCCCGTCCAGCATCCGGCGGCCCGACGGCGCGAGGAACCCGTCCCACATCCGCTCGGCCACGGCGGCCGTGTCCAGCAGATGCGACACCAGAAGGTTCATCGTCCCCCCGGCCCGCTCCTCGGACTTCCCCCACAGCACCCCGAGCGCGTCGACCCCGCCCCCACCCCGATGAGCACGGTCAGTCACGTCACGCCTCCCCTTTGTATGCTGACCGCCAACGTAGCTCCGCCCACTGACAACGCCCTTCTCCAGAGGACTAGTTCATGCGTACCGAATCGTGCGAGGAGGGCCCGCGAAGCCACGTCCCCGCGACGACACGACTAAAGGAAAACGGCCCCTTGCGGTGACAGAACCACAGGTCGGGAAGT # Right flank : CGGCTGGCGGCGGCTCACGGTAATCGCCCGGAACTGATCGGCCCCAAGGCGCATCGGTGTCTTCGGGCCGATCGGCGTTCAGATCGCGTCTGTGCGGCGCGGCCCCCGGAACACGTCGGTACAGTCGCCGCTTTCCGCGCCGACGCACCGCGAGGACGACGATGACCGTACCGCCCACCACCCCGGCCGAGTACTGGGACAGGTACAAGCCCCACCGGGGGGAGGGTGACCAGCCCGCACCGGCGGTGGAGCACTTCTGCTGGACGCCGTACCCGGGGCACGGGCCCGGTGCGGAGGTGCTGGGAACGCCCCGGACGGCACTGGAGCTCGGGCCCGGCGACGGCGTGGAGCTGGTGTACCTGGCCCGCCACCACGGTGTGCGGGGGACCGGGGTGGACTTCTCCGCCGTGCAGGCGGAACGGGCCGGGCGCTGGTGGCACGAGGAACCGGGTGTCTCGTTCGAGCACGCCGAGGTGTGCGCGTTCCTCTCCGGACGTCAG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCGTGCGGGGTTGGTCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 107539-106961 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000054.1 Streptomyces sp. SID4919 SID4919.c54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107538 29 100.0 32 ............................. CGGATGGGCGAACAACACAGGGTTGTTCTCAT 107477 29 100.0 32 ............................. CAAGCCCACCCATTTACGGTCGCTTCGGGGAT 107416 29 100.0 32 ............................. GGCGCCGCGATCCGGACAACCCGAAGCGGAAC 107355 29 100.0 32 ............................. GCGGCGGCCGCCGACCTCGACCTGTCACAGGT 107294 29 100.0 32 ............................. TGCCAGTTCGTCTCAAGGCCCAGCTTGACTCG 107233 29 100.0 32 ............................. GGCATGGAGCAGATCGTTGACGACGACTGGGA 107172 29 93.1 32 ...................AA........ GCAAGGTGCGTCTTCCCCGCCCCGGTCGGCGC 107111 29 96.6 32 ..........................A.. TACAGCACCGGTACGCGGTTGGTCCGGAGAAG 107050 29 96.6 32 ...........A................. TGTTTGCGTCGGCGCTGCTTGGTCCGTTCAGT 106989 29 96.6 0 ......................C...... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 GTGGTCCCCGCGCAGGCGGGGGTGTTCCC # Left flank : ATGATGTTTCCCCATTTTCCAGGGTCGCGGACCGCCGTCCTGTCCAGCGGTCCTCGGGGTGAGGTGATCGCCCTGGTCCTCAGGCACTGCACAGCACGACGCCCACGGTGCGGACCGCGGGCGCTGCGACTTCGGAGCCACGACTACTGGAACGGAAAGGTAGCCGATCCGGTGCCGGCTGGCTACGGACCGCGGCGAGCGACGCAGCTCCGGGACAGGGCGCGGCGCACTGCCTGTGACCTCGTTCCGTACGGCGGCGGGCCTGCGGTGAGCCGTCGGCGCGGGCCGGGTGCGGCGGTCCTGGAATACCGGGACCTGCCGGGCGGCTGTGCCGGCGTTGGGATACAGGCGGGCCGGCTAACGGCCGTCGCAACTGAGCACCCGCACCGCCGTCTCTGCCGGGCTGTCACAGGCGGGTGGCAGGGTAGCTGTCATGACGCTGCCTCAGCCGGACGAGCAGTCCTCCTTGGTCCTGCGATGCGATTTCGGTGACGACCGTG # Right flank : TGACGATGCGTTCGGTGGTGCCAGTGGTGCCGTAGTCCTCAATTTAAGCCGCCCTGATTCCGCCTGCATCTTCCACACTGTCAGTACATTCCGGGGATACCAAGGAGGCCTTCACCCGGAGAACCGAAAGAGTGACTGCGGGCGGTGGGATTCCACTGGGACTTTTCTCGGACTTCCGACTGCATCAACGGGCATGGCCGTGAAACAGTCGGAGGAGCATTTGCGCATGTCAGCAGCCCGGTGCCAGCAGCCGCAGCAGGTCACAGACCTGACTGGTCTCTTCCGGGACATCTGACGGACGGGGTGTCGTGCCCCTTGAGCCCAGGGGGCACAACACCGCAGCAAGCCATCTGACCTGCGAATGCTTACCTTCAAGGCCCTTCACTGGTCACTGTTGCTTTTCAGCACCTTATGCAAGGCACATGCAAGATGATCTTGAATAACTGGCTGGACGCCAGGAAGAGTTGAGTCCCCGTCCGCCTTTACGGAGGGTTGCCGCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCAGGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCAGGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3450-2810 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000057.1 Streptomyces sp. SID4919 SID4919.c57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3449 30 93.3 31 ............................TC GTAGAAGGTGCCGCGTCCGGAGTCGGCTGAT 3388 30 93.3 31 ............................CT ACTACATCGAGGGCAGCTTCGATGTGGGGGA 3327 30 100.0 31 .............................. AATAGGCGGCATATTTCGAGGCCTCGGTGCG 3266 30 100.0 31 .............................. TTCCGGGTCAGCGATACGAGCGGGCCAAAGA 3205 30 96.7 31 .............................A TCGGCCCGGCGGGCGCGACGTCGTTCGTGAT 3144 30 100.0 31 .............................. AGAGGGCGGCGGCCGGGTAGGCGAGTGCGCT 3083 30 96.7 31 ............................C. GCACCGGCCATGCCGTCGCCTTCCTGGGCGG 3022 28 86.7 31 ................--..........CC ACCGGGCAGTCCCAGGCCGAAATGACCGACG 2963 30 80.0 31 ..G.........TCT.............CA TCTTGGCGGCGTCGCAGTGCGGCGGGAGCAG 2902 30 76.7 31 ..G........GTCT.........T....A AGTGCGTCGAGTACACGCTGGAGCGTGTGAA 2841 29 76.7 0 ..G........GTC-.........T...A. | GG,A [2813,2828] ========== ====== ====== ====== ============================== =============================== ================== 11 30 90.9 31 GTCGTCCCCGCACGCGCGGGGGTGGTCCGG # Left flank : GATCGCACTCGAAGAGTGGATCAAGGTCTGGAACGAGGCCGCCCGGCCCTTCAAGTGGACCAAGACCGCCGACCAAATCCTCGACCGCATCTGCCGCTACTGCGACAGGATCTCCGAACCAGATCACTAGGCAGGCACCCCCCGGCGCGTGAAGACGGGGTGCCGTACAGGACTTAAGGGCCGGGCCCTACGCGTTGCGGGCGTGGTCGACTGTGCAGGGGCTTCGGATGTGCACGTGTTCCGCGCCTACGTACTGGAACAAGGCCGGTACCCCGGAACCGGAACGCGGGCACTGGCATCCCCTACACCATGCGGACTCGCACCCCTCCCAGCGGATTCACCCCGTAAGCTCGACCCGCCGCAGAATCCGACCAGAACGACCGCTTCCCACCACCCTGTTGACTCAACACCGAAGGGCCTGCCCGATGCCCCCGCCGAAGGTCCCGATCCCACTAACGGAAAACGAGCCCTCAGCCGGATAGAACCGCAGGTCAGGAAGT # Right flank : CGCTGCTGGGGGTGAACTGGCGTTCGCGTCAGGGCCGGTCGGGAGGTCAGGCGTGTGAAGGCGGGGTTCGTAAGGGACTTGGGGGCCGGGTCCTACGCGTTGCGGGTGTGGTCGGCTGTGCAGGGGCTTCGGGTGTGCACGTGTTCCGCGCATACGTAGTGGGTGACGCTGACGGCACCGCTCATGCTTCCGTAGCCGATGACCACCGGTACCTCCGTCCAGCGTCCGCACTTGCAGCAGTGCTCACCCGAGACCGGCGGCACCTGGGGGAACAAGTCGTCAAGCCTCACGCGGACCTCTCCGCCCCGGCCCTCGTCACCTCGGAACCGTCGAACGTGAACGGGAGGTCCACACCGAACGTCGCCGCCGCTGCCGCCATCCGCCGCTCGTGCTGCCTCGCCCGTTCCTCCTGCTCCCCGATCCAGTCCCGCAGGTACGGCGGGACCCGGTGCCCCCACGGCGACGGGACCGACCTGGCGAGGACGTGTGCGGGGACGGGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTGGTCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 6030-5573 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000057.1 Streptomyces sp. SID4919 SID4919.c57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6029 30 93.3 31 ............................CT CGCTCTGGGCGCAAGGCACACCCCTCACCCT 5968 30 93.3 31 ............................CG AGATCCGCTCGTCATACGTCGGGGCGATCTC 5907 30 96.7 31 .............................G CGTCGCACACGCGTCCGCGGGGTGGCCCGGG 5846 30 100.0 31 .............................. CGAGGACCCTGTCCAGGCAGTGATCCCCGAG 5785 30 93.3 31 ............................TT CACGGACCTTGAGCTTGAGGCCGGAGACATT 5724 30 100.0 31 .............................. GGTCCGAGTACCCGACCGACCGCGCGAAGCC 5663 30 96.7 31 .............................A TCGCCTCATTGATGATCGCGCGCTGAATCGT 5602 30 90.0 0 ......................AT.....T | ========== ====== ====== ====== ============================== =============================== ================== 8 30 95.4 31 GTCGTCCCCGCACGCGCGGGGGTGGTCCGC # Left flank : TGGAACCGGACCAGCTCCTCGCCCGGGTGCGACGGTCTCTTCGGCTGATCAGTCACTGGCCCCCCAGATGCCGTTCAACATCGCGCCCGAGCGGCACAGCCCGAACGCGAGGGCAGTGTCCCGCATCCGCCGCACCACTGCCCAACCGGCCCAGCAACGGGGCCCCGGCTGCAACAGGATGTGGTGACGGGGCCCTCCCTGCATGCTTCACAGAGATCCGACGGGGCCCGAGCGACGGCGCACCCAGACCGGGCAGGGAGAACAGGGCCGAGACCCCAGAACCAGTACGGGACGCTGACAGGCCCCTGCGACATGCGAACTCGCCCCCACCCGAAGGAATCACACCGTAGGCTCGTCCCGCCGCAAGGCCGACAAGAACCACCGCTTCCCACCTGCCTGTTGACTCAACACCGAAGGGCCCGCCGATGCCCCTACCGAAGGCCCCGATCCCACTAAAGGAAAACGGCCCCTCAGCCGGATAGACCCGCAGGTCAGAAAGT # Right flank : GGCGTGCGCGCGGGGCTAGTTGTTGGCGGAGTGGGATGCCTGCGTCGCGCCTGGCGCGTAGCGTGAGGGGAGGGCCACCGCCAGAGAGGAGTCGTCATGTACGAGGTGCGCGATCACCCGGCCGGCGGCTACTACATCGTCCACGAGCTCAGCGGCCATCTCGCTCATGTGCAGCGGGACGGCCACATGGTGGCCGCCATTTTTGCCGACTGGGACGAGGCGGACCAGCACCGCAGGGACCTCATCTCGTACGCGGTCGAGACGAGAGGGAGGTACTCGTGACCTGTCAGAACTGTGGGCAAGACACGACGGTAGAGGGCGGGTGGTGGCACTGTCCGCACTGCGGCGCCGTCGGCCCGCCCTACAAGCCCTGACATGAACGTCCCGCCCCCTTCCTGCCCCATCTCCGGGGCGGGGAAAGCATCGTTGTGTATGCCGGTCGGCGGTGATGCGGTCCCGGCACGATGGGCGGTGTCTCTAGGGTGTTGGCCGACTGAAGG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTGGTCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 10611-10330 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJN01000057.1 Streptomyces sp. SID4919 SID4919.c57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 10610 30 100.0 31 .............................. TGGAGAACGTCCTGGGCTGGGCCCCCGGCTC 10549 30 96.7 31 .............................A AGACCGAGGCCACCCCCGACACCCCCAGCAC 10488 30 93.3 31 ..A.........................T. CAACGAAGCTTCCCTTTGGGATCTCGTCGCG 10427 30 83.3 38 ..C.G........A..............CC TTCCCACACCTGTTGCCACGTCAGGGACTTCCGGTCAG 10359 30 63.3 0 CCCC.........A..T....AC..C..AC | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 87.3 33 GTGGTCCCCGCACGCGCGGGGGTGGTCCGG # Left flank : ACCCGAGCCCCCGCCGGAGCCCCGCATATCACCCCGCCCGAAGCCTGCCGCCCGAACTACCCGGACGAACCGGAGCGTTCCGAACCCCCAACACGCTTTGTGCCGCCGCAACTCACCCAGGCCCCATACACCAACCACGGTCGCAGCCGCCCACAACACTGGCTCAGTTCAGCCGTTGCGAAGCCGGGCAACGGGAGGACCACCGATTCCGGCGACTCGGGTCGGCCTCTGAACGACAGCCCCGACGGGGGCAACCACACAGCAACAGATGCCGACGGCCCCACGCGCCGCCCCCGCCGACCACCCGGCCCACCTCTCGGATCACACGTCCGGGCCCGCCTGGGCCCCATAAACTAGGACGATCACTGAACTCATCACCACGAGGAGGCCAGGGCGGCGGGGTACGCACACCCCCGGGACGCACGCGGGTTTACCCGAGGGGTCTGACCTGACTAAAGGAAATTACCCCTTCGACGGAAGAAACCCGCAGTTCGGGAAGG # Right flank : CATTGCCCTCGGACAAAGGCCGTTGAGGATCTTGTCGCGGCGGGCTGAATGCCAGGCGCAGCGGGCGCGCCTAGAGCTGCGCACCAGGTGGAATTTCCGATTACCAATCGTCCATTCGACGCCGACGGGCCACTACGTGGTCAAGTTCAGTCAATACGACGCGCCGTCGCATTCGATCCTCCATAACCTTGACCGGTCGCGTTACAAGACTTGGCGCGCATCTGTCTGTTGTCGCCGACGGTCCGGTGATGAACTCTGGCTTGTGACCGAATGTCTGTCACTTTTCTTCGTCCACCGCCACACCAAGGGGAGCAGTGGGACGTTCAAGGGAATTACTGATATCGGGAATAGCACTCAGCGGTCTCGTGGCCGCATCGATGACCGTCGGGACAGCGTCAGCCCGCGTGTCGGAACCTGCCGCGCCGTCAGCGTCGGCCGACGGCAACAGCGCGGAGTCCTACCCGAAGCCCATCGGTCTGTTGATGGATGGAAGGTCGCCG # Questionable array : NO Score: 3.43 # Score Detail : 1:0, 2:3, 3:0, 4:0.36, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGGTCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //