Array 1 1999-51 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDGV01000031.1 Testudinibacter aquarius strain ELNT2x Taquaris_S30_L001_R1_001_trimmed_contig_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1998 28 100.0 32 ............................ TTGCGGTATTGTATTCCTCGCACTGTCGATCA 1938 28 100.0 32 ............................ TCGGCACAACAGCGCACGCTCTCGCCGAATTC 1878 28 100.0 32 ............................ AATAAAGGCGAAAAACCCGAACGGCTTACGCC 1818 28 100.0 32 ............................ TTAAATTCTAAATTGGAGCAACAGGGCGTAGT 1758 28 100.0 32 ............................ CAAGGCTTTGAACTTACACGCTTATAAATCCA 1698 28 100.0 32 ............................ TCAATGCCTGAACAGACTGAGCCGTAAGTGAA 1638 28 100.0 32 ............................ ACCACTAAAAATGGCGTCTTCTAAGGCTTCAA 1578 28 100.0 32 ............................ TCTACGACACAGCTCAACAAGTTTATCACTAT 1518 28 100.0 32 ............................ GATTTGCCGACTTTTCAGTAGATTACGTACAT 1458 28 100.0 32 ............................ GCTTTCGGGCGGGGCTGAAAGGAGAAACTATG 1398 28 100.0 32 ............................ TTGAAAAAAGGTGATGCATTATATTTTCCCAT 1338 28 100.0 32 ............................ CATACGCCGTAACCGAATGCCGCCGTCAGCAC 1278 28 100.0 32 ............................ TTTGGGGGTGTGCAGCAGGCTATGCAAGTTAA 1218 28 100.0 32 ............................ TGCTGAGAAGTTGCCTATGGCAGTGGCGTATT 1158 28 100.0 32 ............................ ATTATATCGCGCAAATAATTTTCGTCCTTTTC 1098 28 100.0 32 ............................ GAAAGAGGACAAGGATAAGGCATGAGGCTGAT 1038 28 100.0 32 ............................ TTTTTAAAGTAAGATTCACCACTCCGTTTACT 978 28 100.0 32 ............................ GCAAAGCGGCTATGACTTTGCTAAAGCTGTAC 918 28 100.0 32 ............................ GTTTATTTTATTTTCATCAACAAAAAGTGAGA 858 28 100.0 32 ............................ ATGCCGAAAAGCACACTGCAACAGCGCATTGT 798 28 100.0 32 ............................ TGACCCGCCAGCTGATCATCAACGATGATATG 738 28 100.0 32 ............................ ATGTTCAACGAGAGCATACCGACTAAGCGGGA 678 28 100.0 32 ............................ ACCGGACAGACTAATGTCGTCATACTGCGTTC 618 28 100.0 32 ............................ TGCAGGAACTCTGTCATCGTCGTTCGCCCAAA 558 28 100.0 32 ............................ AAGACCGCATTAAGCGGGTGATTATTCAGCTT 498 28 100.0 32 ............................ ACCATTTCCAACACCACTGGCGGTAAGCAGTC 438 28 100.0 32 ............................ ATTCGCCGATTTCATCGGCTTGTGTTTGGCTT 378 28 100.0 32 ............................ AATTTACTTTTGAGGAACAAGCAAGGTATTTT 318 28 100.0 32 ............................ CCGTTGACGGTGGTCAATCATCAAGTGCAAAT 258 28 100.0 32 ............................ TAACAGATCAAATATGAACAATAAAGCACTGT 198 28 100.0 32 ............................ CTAAGCGAGGATCTTTTTTCCACGATTCAATG 138 28 100.0 32 ............................ ATTGACAATCGCCCACCACTGGCGGTAAAACC 78 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 33 28 100.0 32 GTTGCCTATCACACAGATGGTTTAGAAA # Left flank : | # Right flank : AGTTACGCCGAACGAAAGAAAGGCTAATCGAGCGTTGCCTATCACACAGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCTATCACACAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 22107-19437 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDGV01000030.1 Testudinibacter aquarius strain ELNT2x Taquaris_S30_L001_R1_001_trimmed_contig_30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22106 28 100.0 32 ............................ AACAGCAATTAATGGGATTCAAAGTGCGGTCA 22046 28 100.0 32 ............................ AGATTGGACTTACGATTGCGGCAATTACCGGG 21986 28 100.0 32 ............................ GATCGTATTGAGCAACGGCGCTGAATTGCATT 21926 28 100.0 32 ............................ CCGAATATGCCGCTCACTATAGCGGAAATACT 21866 28 100.0 32 ............................ ACGATTTTGAAGACGGCGACATCATCGTGCAA 21806 28 100.0 32 ............................ TAGCTGCTGCACTTGCTGCATTAGCTGCATTA 21746 28 100.0 32 ............................ TATATCTCGCTGATTAATCACATCAACAGCCT 21686 28 100.0 32 ............................ AAAGCTGGACAGGTGATTGGTAACTTTAATAA 21626 28 100.0 32 ............................ AAAATCAGAAAAGGGGCTTACCACCCTCCTGA 21566 28 100.0 32 ............................ ACTGAACATAAGTAAAATCACCGCTATCACAC 21506 28 100.0 33 ............................ ACTCAAAGTCCAAATACAGGATTCTGGGTAACT 21445 28 100.0 32 ............................ AAAATGAATGACTGTGAAGGTGCCGGCAGTGA 21385 28 100.0 33 ............................ CACCGGAACCACTATATTGTGATAGTATGGTTT 21324 28 100.0 32 ............................ TTGAACAAGACCTTTTTTATCAAGTTGGCGGA 21264 28 100.0 33 ............................ CGGAGCCGCCAAACGCATCAACAACCGTCCAGC 21203 28 100.0 32 ............................ GCCAAGCGCAGTTAAGGTTTGCAAGCTACTCA 21143 28 100.0 32 ............................ CCTGCGCCGGAACGGGCGCGAATGCCCCATAA 21083 28 100.0 32 ............................ AAGTGCGGTATTGGCGCACCATTTCCCAGATG 21023 28 100.0 32 ............................ TTTGGCAAACGTGCCGTCGGCGATGGTGATCG 20963 28 100.0 32 ............................ ATCAGATATGCGCCCCGACAGTGGTCTTTTTG 20903 28 100.0 32 ............................ GGCAGTTGCCGCAGGAGTATCAAAACGGAGGT 20843 28 100.0 32 ............................ AGAATGCGCAACACAGCGGTATTTTACACAGC 20783 28 100.0 32 ............................ CATATCAAAATAAAAAGAAAAGAGAGGTTTTC 20723 28 100.0 32 ............................ AACTAGAAGCGGTAAAGGGGTTGGTATTGTTA 20663 28 100.0 32 ............................ GCACTAGGCGTTTCAGAAAGCGAATTAACATT 20603 28 100.0 32 ............................ AGACTGCGATTGTCACATCTGGGATAGTAAAA 20543 28 100.0 32 ............................ ACGACCAAGTTTGTGAAAATGCTGATTGCGCA 20483 28 100.0 32 ............................ AGTCAAGATTAGACTGAATCTGCATTTGTCGA 20423 28 100.0 32 ............................ TCATCAAACACTTGTGACGAACCGCCTTTACT 20363 28 100.0 32 ............................ TAACAATATCGCTGAAATGGTTATCCGCCGCC 20303 28 100.0 32 ............................ TTTAAAGTTACCGATAAAAAAAGAGTTGTTGA 20243 28 100.0 32 ............................ ATATCAATAAATAACTTTTGATATCGCACTTT 20183 28 100.0 32 ............................ GCACTTTTAAAGAATTCGCCGAAAAAGGGTTA 20123 28 100.0 32 ............................ TCTAAGCCGTCCATACCGCTCAACCCCGCCGA 20063 28 100.0 32 ............................ GCGCTATATCAGTTATATCAAATCGGATTAAT 20003 28 100.0 32 ............................ GACTTAAGGTGCTTTAAAAAATTGCGCTTTTG 19943 28 100.0 32 ............................ TTGCAAATTTATTCGATTAAACAGACCGTCGG 19883 28 100.0 32 ............................ ATTGCAACAAATGCCATTGCCGCAAGGAAAAC 19823 28 100.0 32 ............................ TTTCTATTTTCTAACAAATCACTCCATACCTT 19763 28 100.0 32 ............................ TACCTCATTGCCATTTTCATCGATTTCCAAGT 19703 28 100.0 32 ............................ AGATTGATGCACGATATTGAGAGGGAATAGAA 19643 28 100.0 33 ............................ TTTTTTAACATTATCTTGTTTTCATCACTGGCT 19582 28 100.0 32 ............................ TGCCGAGTGGCTAAATCGGCTTTCTTTTCGTT 19522 27 89.3 31 ..................A.....-..G CGCAGAATGTAAATCTCCGAATTTTCCTAGT 19464 28 82.1 0 ...AT........T..........A.T. | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.4 32 GTTGCCTATCACACAGATGGTTTAGAAA # Left flank : CACAGATGGTTTAGAAACGACGTGCAACACTGGAGCAGACCGCACTTG # Right flank : TTAATCAATATCTACTTTTTGCAACATACTAGGTTGTCTATCATTACTTATAAACAAAATAAACCCCAACCATCGCTACTAAATAAACTATTCCGGTCCAAGCCAGATAAGTCAGCCAGTCTTTTTGCTGTTTATCTTGGCGTGCGAGGCTGAAGTTGAGCCAGGCAAACACCGGGGCGGAGACGAAGGAGGCGGTCATGGCGAAGGGGATCATTTTGCCGATGGCGCTGCTGAAGAACTGGATCACGATAAAGGCGGATAAGGTGGTGAAAAACATCGAGTAACGCAAGGTTTTGTCGTGGTAAGTCGGGTTAAAAGTGCGGTTTTCCTTTGCGGATTTTATCGATTGTCGGAGTAAAATAACAGTTTGTTGGTTGCAGCGGGAATAGCCGTCGACGGCGACGATGGTGGTGCCGTAGATGCAGATAAATGCCACCAGTGCCATAAACCAGCGGGTCCATTCACCGATGCTGAGGGCGTACATCTCTACGAATTGTCGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCTATCACACAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 153-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDGV01000082.1 Testudinibacter aquarius strain ELNT2x Taquaris_S30_L001_R1_001_trimmed_contig_82, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 152 29 100.0 31 ............................. TGCAGTATAACGCCGCAGTTAAGCAGTTAAA 92 29 100.0 31 ............................. ATGCGCGCGTATGAAAACATGTTTTTTCACG 32 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 3 29 100.0 32 GTTGCCTATCACACAGATGGTTTAGAAAT # Left flank : TCATATACTAAGTATTCAGAATGTACCATCAAATGTTACTGAACACCTTGTGGTCAAACGCTTACGCCAGCGTACGAATAATGACAAATATACCCGGGATTATGCGAAAAAGCATAATCTCAGCTTTGAAGAAGCGAAAGAGGCAAGAGTGCAGCGTTTTATGGAAGTTCATAATGTCACACTCCAAGAATCTCTTGAGCATTACGAAAATCCAGTGTTAAAACGCCGCCCTTTTATTATTATGCAAAGTTTGCGGACAAAGCAGCAATATTCTTTAGAGATCGAACAGTTACGAGTGAATGGACCAGTAGCGGGTGCTTTTAGCAGTTATGGATTAAGCAGCACAACAACAGTTCCGGCTTGGTAAAATACCTTCATAAAACCGCTCTTTAAAAATTTGTTATTTATCAAATTGTTACAAGATTACTTAAAATAATGGTCAAGCGCAAGGTTTTAATGTCATCCCTTGCCTTGACTATTATTTTAGGTGTAATCTTCTA # Right flank : TTGC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCTATCACACAGATGGTTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //