Array 1 82137-83753 **** Predicted by CRISPRDetect 2.4 *** >NZ_AICL01000003.1 Ligilactobacillus salivarius SMXD51 SMXD51C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 82137 36 100.0 30 .................................... GCAACCAAACCCATACCGCCAGCCACTGAT 82203 36 100.0 30 .................................... GATGATCTAGCTAAATCATATCTAGCAAGT 82269 36 100.0 30 .................................... AGTATCAATTAACCAAATTGATACGGTTGA 82335 36 100.0 30 .................................... GAGTTAGAGAAACACTACAAGAAACATCCA 82401 36 100.0 30 .................................... AAAAAGAAGCAAATTTCTACCTAAAATTCG 82467 36 100.0 30 .................................... TGAATGAATAACGTTGTTTAGCTGCAGCAT 82533 36 100.0 30 .................................... TGAATGAATAACGTTGTTTAGCTGCAGCAT 82599 36 100.0 30 .................................... ATAGCGTAGTTCATAGTGATTGCTATTATT 82665 36 100.0 27 .................................... GATATTATACCACTTTAAAGCAGCAGC 82728 36 100.0 30 .................................... CTATCTTTGTATGTATTTTGCGGTATTGCA 82794 36 100.0 30 .................................... TAACTGAAAAAGAAATAATGATAGATGATT 82860 36 100.0 30 .................................... TACAATTTAAATATAAAATACATACACACA 82926 36 100.0 30 .................................... AAGTCATTCCCAAGTTCATCATATTAGCTT 82992 36 100.0 30 .................................... CGCTTGCCGTCTTTTTTGTAGATTCTACCT 83058 36 100.0 30 .................................... TAATAGGTTGGGTTGCTGATAACGAGCGTA 83124 36 100.0 30 .................................... AAGATATCTTTAGTCTAGCTGAACCAATTG 83190 36 100.0 30 .................................... GATACACAAGAAAACTTTGTATTGATTGGG 83256 36 100.0 30 .................................... ATAAAGATATCGTTCATCATTTGAGAGACT 83322 36 100.0 30 .................................... TGGTAAAAGGTGCAACTTTAGAGAATCCAG 83388 36 100.0 30 .................................... TAACAACCGGTAGCGTTTGTACTGAACCTA 83454 36 100.0 30 .................................... CAAGTTTTGCTTTAAGCTCCTCTACTTCCT 83520 36 100.0 30 .................................... GACGGATCATAAAACGCCTTTTTATCTCCG 83586 36 100.0 30 .................................... AAGGGTTATCAAGAACATGTACAAAATCAA 83652 36 94.4 30 ........................T..........T GATCTACGTTACATTTTCTTAATGTTCACA 83718 36 88.9 0 ......T...A.........T....G.......... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.3 30 GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Left flank : AACAGACCGAATTGGTAAAAAATATATGAACATATTGATTAAGAAGATTATCGAAAATCTTACAGACGATGAAAGACAGGCAATACTAAAATCAGTAAATAGTTTGTATGATAGGATTCGAGAAGTTTTGTATAAAATTGATATACCCTTACAAGTAGATTATGACAATGATTTGACAAGACTATTCAAGTACTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCATATGATAGAATATCTTCAGATGTTAAATTACATGTGGAATTAAATAGAAAAAGAATTATAGGTCTAACCAACGTCGCGCATTATCTTACAGAAGGAGAATTTCAAGAACTTGTAAGTCTTGTTAAGATGACTAATTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATGTTGATTGGTACTGATAAATTGTTAAATTTTAATTATAAATTAATA # Right flank : CTAAAAAAAATATTTTATAGTACTTATAAATCTATCAGAAATTTTTCTGGTAGATTTTTTTATGCAAAAATTTTGTATTTTATACTATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGATTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGAAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAACTAGGGAGGGGGAATAATAATGAACTCAGAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //