Array 1 111223-110600 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MJJE01000004.1 Campylobacter lanienae strain P0027 .11822_4_24.4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
    111222	    37	  97.3	    36	.......G.............................	CTATATTTTTAGCCATTCCCCATCTTGCTCTACTGT   	
    111149	    37	 100.0	    36	.....................................	CTGAGTTAGTTCTGTTATTACCAGTATCGATTTTAC   	
    111076	    37	 100.0	    35	.....................................	GAAAAACTTAGAGCAGTTAAAATCATTTGGAAATC    	
    111004	    37	 100.0	    39	.....................................	TATAGAAAATTAATCCGCCATTGCTCTTGAAATTCTTAA	
    110928	    37	 100.0	    37	.....................................	ATAATGAGCCTACAAAATAGCATTATAAAGCCAGTGA  	
    110854	    37	 100.0	    36	.....................................	TCATTATATCGTGATGGGTGGTTTAGCTAACGAAAT   	
    110781	    37	 100.0	    35	.....................................	TCATCAGGTTCAGAGAGTTGTCCTATTCCTAAAGA    	
    110709	    37	 100.0	    36	.....................................	GTGGCTTAATCCAACTGGTATAAGTTTCTTGTATAT   	
    110636	    37	 100.0	     0	.....................................	|                                      	
==========	======	======	======	=====================================	=======================================	==================
         9	    37	  99.7	    36	GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC	                                       	       

# Left flank :   ATAAGAGAGAGAAAAACTTCTCTTACTCTAAATCTAAAATAAGAGAAAATGAAGTTAAAGATAAAGAGATTTATTTGGGGAGATGATTAATAGCAATAATACATTATCATAATAATTATTTATAAATCTAAAAATTTTTTTTAATTTTTGATATTTTTAAATAATTCTATTATTTATAGCTTGAGTTAATATTTCCATTTTACTCTCCTAAAAATTGTTTAAAAACTTCTCTACATTATCACGCTCACAATATTTATAATATTGTGTAGCGATACGCATTAAAATCATCTCTCTCTTAAACTTATCAGCTCTGGCTCATCACTTTGATAAATTTTATATAACGAAGCATTTACTAAATCTATATCATCAAAATTAGCCGCTATACCTAATTCTGGGACAATCTCATCATTAAATAGCTCTATTTGCTCCCCTTTTTTTTGTAAGCACAATTCTAAAAGCATTTATAAAGTCTTGAGTGTTTGTAAAATTTTTGTATTTGT
# Right flank :  TCCGCACAAAATGCCCTATTTTAGGGATTTTGCGCTTAGTTAATTGTAAAAATTTTTCCACTTAGAAAAAAATCGCAAAAAATGGCGAATTTGTGGAAAAATATGTTATAATTCAAGCGCAAATTATACCATAATCTAGCTTATAGCGTTTGAAATCACCACAAGGTGTTTTCATATCGGGGCAACTGCCTTTGGCACCCCCGGTTATTCTCTATCATCACAATAATTTTTAAACTCACATTGCGCACAAGCTGTAATGCTAGCTGAGCTTTGGGGGAAATATCCTTTTTCTAATAGATCTTGAATTTGCGTTAGTGTTTTATCAAAATAAGCTAAATCCTCTTTATAAATTTCAAAGATTTTAAATTTTAGATTATTTGAGTAGCATAAAATCACCCTATGAAAAGGCTTTTTAAAGTGCTTACTAGCAAGTTTAGAATATGCTATAAGCTGCATTTTTGCGCCCTTGCTTAAAATTGGCTTTGATTGGTTTTTAAACT

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAAACCAAGTTGGATTGTGGTATAATTTGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.86%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.30,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.64   Confidence: LOW] 

# Array family : NA
//