Array 1 165858-166158 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKVP01000004.1 Acidovorax sp. ST3 ST3_scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 165858 36 83.3 30 C...T...AG......T...G............... TGAAGTTGTCACCCACCCCTCTCCCCCAGA 165924 36 94.4 30 ........C................C.......... TCGGCTCAGTCATGGTTTGCTCCTTGCTTG 165990 36 97.2 30 ........C........................... TGCGAGGTTCATGCTCTTCTCCTAGTTTGT 166056 36 100.0 31 .................................... CCCACCCGCCCAGGCGGCAGACAGCGTGCTG 166123 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 95.0 30 GTTCCGGCTAGTGCGCATATCCCAGTGATCTAGACT # Left flank : ACGACAGCCACAGCGACACAAAACGGCTGCGCTGGCCTGCGTCCAGCCCGGGCTCCAGCGCCACCATGACCTGCGGAATGCCCGACCCTGCAGCCCCGGGGGCCCACCGGCGTGTGGCCCACACGGCGAGGGCGGTCACGGCGGGCGTCCACAGCAGCACCGCCCAGCCCCCCTGCCAATGGAAAATGCGCTCAAACAGCCCGAACGCGTGCTCAGCCATCAACGTGAACACCACCACGCACAGGCCCGCTGCGGCGGCGTAGGCCAGTACCACGCTGCGCTCCAGCCACCGCCGCCCGTTCTTGAACTCCTGGTTCAGGTTGTCAAGGAAGTCGGGCTGTTGGTGGTGCATCGGTGCGGGTGGACGGCATCAAAGCGAAGCATTGTGCATGCCAGATAGCAAACACCGGTTTTGGGCCCCCTCCGCCGCACCTGCATGGTCGGATTCCGATTTCCTTGCGATACCACGCGACCGAGGCCCATATAGAAAAATTCTTCGC # Right flank : TCTGATCGCGATAACCCCTTGATTCGTCAAGGGGTTTTTCGTTTCCGCAGTCCAGGAAAACTGGCGTGGGGCTAGAAAAGATCGAACTGATCGGGCGCTTTTTGTGCGGGCTGGCGACTGCGGCCGTGGAAGGAGATGGCGCGTTCGTACTGCTTGTCGGTGAACTGGAAGATATGCACTTTGCCGCCAGGCGGCAAGGCCTGCTCCACCTGCCGGCAGAGCGTGTCCACCTTGGCCTGGCTGGTGGAGAAGCGCAGATAGACGCTGAACTGACTCATCGGGAAACCCACGCCCAGCAAGGCATTGCGAAAGCCCGTTGCTGCTTTGCACTCGGCCTTGGTGATTACTGGCAAGTCGAACATCACCACCATCCACATGAGTCGGTACCCCGTCAGCATGGTTGCAATCCTGCCTGTACGTTGGCTGCATTCAATCGGGATCGAAGCTGCCTGCCAGTGAGAGCGGCAATCCCGGCAGGGGCAGATCGAGCCGGATCCGCT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGCTAGTGCGCATATCCCAGTGATCTAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //