Array 1 8600-6468 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBU010000027.1 Psychrobacter vallis isolate Psychrobacter vallis CMS39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================== ================== 8599 28 100.0 32 ............................ CATCGCAAAACAAGTATTACTGTGCATGAGTT 8539 28 100.0 32 ............................ TCTGTCGAACCCTCAGCCAGTGTTTTATCAAT 8479 28 100.0 32 ............................ GACCACGGCAGTGACGACAGGTGTCCAAAAAA 8419 28 100.0 32 ............................ CACCAATCCAGTCTTGTTGATTGGAAAAGTTG 8359 28 100.0 32 ............................ CCATCGCGGCGACCAGGAACTGTTTTGGGATC 8299 28 100.0 32 ............................ TCTGAATAGCCAACCACTTGTAATTGTATCTT 8239 28 100.0 32 ............................ ACCAACATTAGCACCTAACCTAATAGTAGTCT 8179 28 100.0 32 ............................ AATGAAAGACAGCGAAATAGTGCACGAAATAC 8119 28 100.0 32 ............................ TGATGGATACGTACCGCCTAATTCGCAGCATT 8059 28 100.0 32 ............................ GTATTCACAGTATCAAAGCTTGATAAAGCAGA 7999 28 100.0 32 ............................ CATAAAAAGCGTATTCCCTATAAGCAGTTATT 7939 28 100.0 32 ............................ AACCGCAGCAGCACCAAGAGCAATCGTACTTA 7879 28 100.0 32 ............................ TGCTCAAGACCCTGCGTATGAAGAATTATATG 7819 28 100.0 32 ............................ AAACCGCTATAACTAGAAGGCAAAGAATCATA 7759 28 100.0 32 ............................ TGATAGTTCAGGTGATGCCGAAGGTGGTACTG 7699 28 100.0 32 ............................ CCAATATTGGGAGTAGAGTCCACCATTAGATA 7639 28 100.0 32 ............................ ATTTTTGAATTCTTACCACTTGTCACAATATC 7579 28 100.0 32 ............................ ATCACTGGTATTGTTCTTGCTTGGCGCACTTT 7519 28 100.0 32 ............................ TGACGACTATTTTGATTTTCTTCTTGATGATT 7459 28 100.0 32 ............................ TTACTTTGGTGTCAAAGTAGATGTCAATAATA 7399 28 100.0 32 ............................ TCAACGTAATGCTTTTGCCAAGATTTGTAGCT 7339 28 100.0 32 ............................ AAAAGAATGGTTAATGGCTTTTATGGTTGTTG 7279 28 100.0 32 ............................ GTTTTGCTCTTGGGCTACGCCTGTTTGTGATT 7219 28 100.0 32 ............................ ATATCAACTTTTGCTTTGATAGGGAAGTCCAA 7159 28 100.0 32 ............................ TGATCAAACGTCACACCCGCATTGATCATGCT 7099 28 100.0 32 ............................ TTCTTGATCGACCAGATCAGCACCGCCACTGC 7039 28 100.0 32 ............................ AGAAGATGATTGGGTAGCTGGTCTATCGGGAT 6979 28 100.0 32 ............................ AATTATGCTAGTAAATGGTGCTAATGGACACG 6919 28 100.0 32 ............................ GTAAATTAGTTATTTTTATACCCGCGCCGCCT 6859 28 100.0 32 ............................ GGTATAGCTACAACACTGGAACAGCATTAGAG 6799 28 100.0 32 ............................ ATAACAGCAATCATCGCACCACCCGACGAGTC 6739 28 92.9 92 ..........................GC CACGTTAAAAAATTGCATGCCAATTTTAGTGGTGCAAGGAAAATCCTTTAAATAGGATTTTCAGAAGTCATGCTTACGCTCAAATGCTAATC T [6713] 6618 28 75.0 94 TAG.TA....................GC CACGTTAAAAAATTGCATGCCAATTTTAGTGGCGCAAGGAAAATTCTTTAAATAGGATTTTCAGAAGTCATGCTTTTAGTCAGATGTTAGAATT T [6592] 6495 27 78.6 0 AAA..-....................GC | T [6470] ========== ====== ====== ====== ============================ ============================================================================================== ================== 34 28 98.4 36 CTTCATCACCGCATAGGTGACTTAGAAA # Left flank : GTGGAAATCGGGTTTATAGAAGAGGTTGGTAACAATAGAACTGGTTATGTCAGTGTGCATCGTTACCGCTTCAAACCTGCTGAGATACAAGCGCAAACCTTGTCAAAGAAGCTATCGATTGGCTATGATGAGGCGATGGTCACTGTCGCAAAACGCAAACCTGAAATGGCGTTGCCTTTTATCCAAATGCGTAGTCAAACCAATAATAGCAATTACCGATTGAAGGTCTTGCAGCAAGCTTGTAGTGAGCCGAAAGCGGGTCAGTTCAGTGTGTATGGTATGAATGGCATGCGCGATGCTGTTACCGTACCGCATTGGTAATGCTGCTTTCAGGGTAATGAAGAATTACCTTAAATTTGGGTGTAAAAACCCTTTTTTTGCGCTATTTAAAAATTTACTTATTTATCATACAGTTACGACTAGGTGAAAAATGGAGGGTAAAATAGGGTTTTTTGCCGTCCAGACCTTGTTGTAACTGATTTTTTAGAGGTATAATTCCT # Right flank : CACGTTAAAAAATTGCATGTCAATTTTAGTGGCGCAAGGAAAATCCTTTAAATAGGATTTTTAGAAGTCATGCTTTTGATTAGATATTAGTATCAAACGCACCGCATAGGTAATCGCCAGCGTGAAATAACTTTTTAGCAAAAGATATAAAGCGTGTGCTTATTTCCAATGATTTAAGTACGCGGCGGCGGTACAGAATACGTGCCCACCACGTGTGCCACCACATCGCTTGAACCTTCTGAATAAAGAGACACCTCACCTACGATAAGCGTGCGCCCTACTTTCATTAAAGTACAATCAGCGATAATACGGGCTTCTGCGGAGGGTTTACGCAAAAAATTGATGGTCAGACTCGTGGTCACCGTCAATGGAACAATGCCAATTTTGCCAAGTATCGCCACATAGATGGCCACATCAGCGATGCTCATCAACACCGGTCCAGAAACGGTGCCACCCGGACGCAGCTCATTTATCCCAATGTCGTGTGACAAAGTCGCGCC # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //