Array 1 237367-238372 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QHCS01000007.1 Leptospira stimsonii strain AMB6-RJ NODE_7_length_238536_cov_165.196, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    237367	    29	 100.0	    33	.............................	TAAAATGGCAACCAGGAGAGTACAAAGTTAAAA	
    237429	    29	 100.0	    32	.............................	ATAACTTGAGAGCCAAGAATGATTTCAAATTC 	
    237490	    29	 100.0	    32	.............................	CAATGGTCATGTCTTTGAAATACGAAATGGTA 	
    237551	    29	 100.0	    32	.............................	CCCTGTGATCCTTCTAATTGCTTCCTTAGGGC 	
    237612	    29	 100.0	    32	.............................	TAAACTATTGTATAGTATTTCATTGTTGCAAT 	
    237673	    29	 100.0	    32	.............................	CGGAGTCCCATTGGTCCCGTCGGAAATTGCGC 	
    237734	    29	 100.0	    32	.............................	TATATGAATTTCCAAATAAACCAATCGCATGG 	
    237795	    29	 100.0	    32	.............................	GTATTAGCGGTTTAGACGTCTTAATGCCTGGT 	
    237856	    29	 100.0	    32	.............................	ATTGTGTTTGTGATAGCTGGAATCCGGAGTAT 	
    237917	    29	 100.0	    32	.............................	CCGAATTCAAAATGATGACTGGATGGCAAGGA 	
    237978	    29	 100.0	    32	.............................	TATCACTGCAATCTAATGCTCTCCAAACCGTA 	
    238039	    29	 100.0	    32	.............................	CCTGGCTTAAGGACGAAGACAAAAACTTTGAA 	
    238100	    29	 100.0	    32	.............................	GAGTCTGTGTGCACCGCGACTATATCTGGGTA 	
    238161	    29	 100.0	    32	.............................	TTACTCGCAGAGATCCGATCTCTGGAATAGAA 	
    238222	    29	 100.0	    32	.............................	CACAAAAACCGTCCCCCGAAAGAATCGCGTAA 	
    238283	    29	 100.0	    32	.............................	TATGTGATTTACGCTGGCGACCGCAGAACAAG 	
    238344	    29	 100.0	     0	.............................	|                                	
==========	======	======	======	=============================	=================================	==================
        17	    29	 100.0	    32	CTATTCCCCACATGCGTGGGGTTGAACCG	                                 	       

# Left flank :   CAAAGGCTGAATCTTCTGTGGAATCAAAGGCCAGATTCTTACTTCGTGACAAACTTAAAGAAACAAGACTGATTAAACGAATCATTCCGGATATTATGGAGATATTATATGGTCATCGTGATTTTAGAGAACTCTTCAGCGAGCCAGAGGGGAGAGATGTCGCGATTAACTCTTGAGTTAAAAGCAGGCGTCTATGCCGGAAATATCAATCGACGTGTTCGAGAAAAACTTTGGGAAAAAATTATTACGGATTGGAAATCAAATGCGTTGATGATTTATACCACTAACAACGAACAAGGTTATGCAGCCTTGTCAAACGGAGACACAACGAGGGAAATCGTGGAAATCGAAGGTATGATCTTGACCCAATTTACGAAAACGGAATCGCCTAAGAAGAAAGGAAAAAAGAAAGTAAAATCGGACCCATTTCCCATTTCTGATGGCGGCTGACCAAATTTATCTTGTTAAGATGTATCAGAACTACTTAACTAATCTTTAGT
# Right flank :  TTGAGAAACAGCACTATAGGAAATTCAGTTTGAATAGTCCTAAAATAAAAAAAGCCAAGCTGATTGAGCTTGGCTTATCTTGAATTGATATACCTTTACAACATATAAACTGCGATAGAGAGTTTGTCCTATTTGAAATCTTCTTTTAGATTTCTTCCTGGCGT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTATTCCCCACATGCGTGGGGTTGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-10.80,-11.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//