Array 1 171383-171927 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJED01000005.1 Enterococcus hulanensis strain 190-7 scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 171383 29 100.0 35 ............................. ACTGTAAATGATCACAAGTATGTGTTACTGAATCA 171447 29 100.0 36 ............................. TTTCGAGGTGCCAGAGATCGACACAGCGCCCAAATG 171512 29 100.0 36 ............................. GTTTCACCAGCAAAACCAGCAGCCGCTGTTTTCAAT 171577 29 93.1 35 ........C.......A............ TCTTGATTAGTGAAGTTTCTGTTCACCGCTAAAGT 171641 29 100.0 35 ............................. GTCATTGCCTATGAACTCGGCTACATTACTTTTTC 171705 29 93.1 35 ...G....C.................... CCTGGATCAATCGATTTCAAAATATCCTTAATGGA 171769 29 96.6 36 ........C.................... GAACCATGAAACGAGAATTTACAACAACTCGCAAAG 171834 29 93.1 36 ........C.......A............ ATCGGTAAGGTGTCCGAAGTTGGTGAGATCGTCTAC 171899 29 93.1 0 ........C.......A............ | ========== ====== ====== ====== ============================= ==================================== ================== 9 29 96.6 36 ATCAAAATATAAAAGAGTGGAATGTAAAT # Left flank : GAAAAAGCGCGAGGAAAAGGACGATCTGATGATGAAAAGAGAAAAAGGCAAGGGCGGGGTTGGAAAAAAGAAAGATCGAAAACGCAATCGAAGGAAATAGGTTGCGTTGATTGAGGATGTTTTTGGTGAAATAGAAATTAAAAAAAATGGTACCTTACGAGGGTTTATTTGTTGTGGAGAAAATCACTTTAGGAGGTCATAAATAACTGAGCGACCATACAATATCTTGCGGATAATTGTATGGTTGTTTGGCGTTCGAATGTATAACCACATTTAATGAAAGGCGAGCTGATGATAGATTACTATGGTCGGTTTTGTCGATCTGTCGACCATAATTAAGTGGAAAAACCTGTAGTTACGACAGCAACAGATAATAGTTGATAGAAAAAGATTTTCTCTGAAAGAGATTGTTATGTTTGATGAGTGGTAAGAGAGTAAAGTTGCGATCGACAGAAAAGTGCTACTAAGACCGCGTGGTTACAGGTATAATTTAAGACGGG # Right flank : TGGAATTGATTCGATAGCTTTTTTTGCAGCAGCATAAGATCAAAATCTAAAAATAGAAGTAAAGACCATGTAGTAGCCCTAAGGTATTTAGTCAAATCTAAAACGAGATAAAATAAAAAAGCAGATTATATATAGCTTAATAGCTAAGTATAATCTACTTTCTTTTATCCAATAATTTTTAGATTTTTGAAAATCAAAGTATTACTTATTTACATTCCAATAGTTTTAGATTCAACTCGTAGTTTGATGATATCATTTTTATCATAAAGTAGTAAATGATTCTCTCCGATATTAATCATCTTCTAAACTCCTATATTAAATCTAAATATTACTTAGGTTAAAAAATATTGACAAAGCACGATGATACTATTATTCTAATAGTATACAATTCCGATGGTTACCATAGAATCAACATCAAGCTAGGAGGGATGGTTATGGATTTTTCAAAATAAATCAGTTTTTATGGTTGTTTCTGATTTTTGTGATACTTAAAATTTTAT # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCAAAATATAAAAGAGTGGAATGTAAAT # Alternate repeat : ATCAAAATCTAAAAGAATGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 181256-183119 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJED01000005.1 Enterococcus hulanensis strain 190-7 scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 181256 30 100.0 34 .............................. GACAGAAATGGTTATGCCGATTGTTCTTCGTTCG 181320 30 100.0 36 .............................. AAAAGCACCGACTGAAAAACGAATCAGACGGCACTT 181386 30 100.0 35 .............................. GAGCTTTTCTAGCTTCTTTCATGGTTCCAGAACTT 181451 30 100.0 36 .............................. AACTTACCAAAAAAGGAGAATGACTTAAATGAATGA 181517 30 100.0 36 .............................. AGGTGATCGTTCGCTCGTCAACGTATTCCAGCTTAT 181583 30 100.0 36 .............................. CAAACAATGTTAAAGCATATTTGGCAGCTATCGAAC 181649 30 100.0 35 .............................. TTAGGTGTTGCACCTTCAAGGATATGGTGTTACAC 181714 30 100.0 36 .............................. AGAGATTCACATCCGGACCGGCAAGGATATGCAGTC 181780 30 100.0 35 .............................. GAAGTAATTGAGCCTGTCGAAGCACCAGCAACGAC 181845 30 100.0 36 .............................. GTATTTATCGATCAACTCGAGCAGGAAGGTTTCTCT 181911 30 100.0 36 .............................. ACGATTGAAGCGATCCACGGTTCTCATTGCTAACTC 181977 30 100.0 35 .............................. TGTTTTAAATCAGAATTAACTCTTGCTGCCTTCAA 182042 30 100.0 36 .............................. AAATGTCCTTGATCGAATTGAACCAATTCAAATAAT 182108 30 100.0 36 .............................. GTGTTTGTTGATAATGCTGAGTCTGTCAATGATCTC 182174 30 100.0 36 .............................. TGTCTGTTGTAGATTTCAACAAAGCGTTTCTTTGCT 182240 30 100.0 35 .............................. ATCGAAGATAATGCTTTAGTGATTCGGACAGAAGG 182305 30 100.0 35 .............................. ATCACAGCATATTTTCGTACAACGAATTGTTTTCT 182370 30 100.0 34 .............................. ACATTTCCGACGGTCGATTTAAAAGAATCTGTAG 182434 30 100.0 36 .............................. AGCATAATAAAGGTAGGCACCTACACCTTGTCCTCA 182500 30 100.0 35 .............................. AAAGCAAAAATCCCGCCAATGATCATAACGATTAC 182565 30 100.0 36 .............................. TCTATAACGCAAGATTTCCAATTTCTCGAAGCAAGT 182631 30 96.7 35 .............A................ GTGGATGATGAATTGATTTATTCTGCTGCTGATAT 182696 30 100.0 36 .............................. AAATCTTTTCAGTGGGACTTAATGGACATTGCCGGT 182762 30 100.0 34 .............................. TAGCTTGAGATTTTGTCAGTAGATCGTTTTCCAT 182826 30 100.0 36 .............................. GCAACAACAGTTAAAGTTCCTGTTACTTCTTTACCG 182892 30 100.0 36 .............................. AATTTTCCCTGTTGGTGAAGTGTATTTTTTAGCCAT 182958 30 100.0 35 .............................. TCAATTAGTGATTGCATCAGGAAGCTTCCAGCGTT 183023 30 96.7 36 ...............C.............. TTCTGTACGCTTGCTAGTTGCGAAAGCAGGTCGAAG 183089 29 86.7 0 .............-...A......AG.... | C,A [183105,183114] ========== ====== ====== ====== ============================== ==================================== ================== 29 30 99.3 36 GTCTAAATCTAAATATAGTGGAATGTAAAT # Left flank : AATACGAACCTTTTAAAATTTGGTGGTGAAAGTGATGTATGTAATTCTAGTCTATGATATTTCTTTAGAAGATAAAGGAGCTCGTGTATTAAATCGAGTATTTAAAATCTGTAAAAAATATTTGAGTCATGTACAAAAATCAGTTTTTGAAGGAGAAATCACGCCAGCAAAACTAATGAAATTAGAGCAGGAATTAAAAGAGTATGTTCGTGAAGACCTAGATTCAATCCTGATTTTCAAAAACTCAAATAAAAAATGGCTAAAAAAAGAATATATTGGAATTGATGGAACAGAAATGGTATCGAATTTCTTTTAGGTGTATATCTGTCGATGGTCAATCCCCTTAAACACCTATTGTTACGACAGACGTCCAAAAATATTGATATAAAAAGACTTCTTTCTTGGTAAGTGTTATTGAAGTTGGAAAAACTCAATGGATTTTTGAGATCGACAGAAACGAGTCTAAAAAGCCTGCTATTTCAATGTATAATAAATACGGG # Right flank : TTATTTATCAGTAGTTTAAAAGGGAGTGTAAATAGTGAATAGAGAACAAGAGACTGAAAAACAAAAAGTTGTCTACATATTACCGTCCACGGCAGTAAGTGCGCCCATGAGCCGAATGTTTGTTTTGTCTCAATATCGGGAGCCGCTCAAAAGAATGCAGGTCTGTTTTGGCGAGCAGTATCTAGTTAAGTCGGATTTTTCAGATAATATAAAGAATTTTCAAGACGATACCATTTATTTGATTCCTGAGCAATTTAGAAATGTGTTGAATATGGAAAAAATTGCGAAAGGAATTATGGTGCCTTCGAATATTTTTTCTGATGAAGTTTTAAATGATTTGCGTCGTAAGGTCGCTGTTTTTCAGATACGACGACCGATCTAAAAGAGTAGGTATAAAAACAGTAAAATGTAAATGATTGTTTCAGTATTAGGTGAGAAGACATGAAAACAAAAACGAAGGATGACGGAAAGCTATGAATAAGACTCTAGATAAGATTGAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAATCTAAATATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 3 184397-184814 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJED01000005.1 Enterococcus hulanensis strain 190-7 scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 184397 29 100.0 35 ............................. TGTTTAGCCTAGGCGGACAAGTGATCCCATTAAAA 184461 29 100.0 36 ............................. CGACTTAAGTGGCTTCCCACCTTTTGTGACGGCTTC 184526 29 100.0 36 ............................. TGCATTTCTTCAAAGGTTTTAAACTCCATCATTTTC 184591 29 100.0 36 ............................. CAAGAAAGAGCTGACTGGATCACTAAGCAATTCAAT 184656 29 100.0 36 ............................. GTGATTGCAGTTATCCGCTGAGCAGTGGAAACAACA 184721 29 96.6 36 G............................ AAAGTTATTGAAGATGCTACCTTTGATGCAACCTTC 184786 29 79.3 0 ..............T.A.A....AAG... | ========== ====== ====== ====== ============================= ==================================== ================== 7 29 96.6 36 ATCTAAATCTAAAAGAGTGGAATGTAAAT # Left flank : TGCGGCTTTTAAATTAGTGAATTACATTATATTAGAAGTTAGAAAAGTTGATATTGATGATTCAGAAGGAGAATTGTTTGAAGTGTCTTCTGAGTGTCAATATATTTGGGAAGACATTCTTAAAAATGCGACAACGCAGGAAAAAGAGAATATGTATCTCTGGTTTAAAATACAACTAGACCAGTATAAATATTATTTTGGTTATTCTGAGATAGAAGTAATTTGTGAGAAATACTTTTAAAGGTTGCGAGATATGTTAGAAGCATGATAATAAAACATATACTAGTTTTAGACGGACGGGAGTTTGTTGGCAATAATTAATCTGTCGACCTTAAAAACATAGAAAATCCCATAGTTACGACAGCATTAAAAAAACATTGACATAGAAAGGCTTCCTCAGATGAATCGTGTTATTTTTGATTAGTAATTGGGGAATAGACTAGAGATCGACAGAAAAGTGTCATTAGGACCTAGTAATTATTGGTATAATTTAAGGCGGG # Right flank : TTTCAAATGAATATGGTCTTAGTGGTCGCCGCCAGTCATCTAAACCCAAAACCACTGGAATACTCTCCTTCACCAACCCAACCTCAAAACACCGTCCAACTTGGATGGTGTTTTCTTTTCCTCACAACTTCTCTCCGAAATCCTCCTGAACTTTGCTAAAATTAAACATAGAACAATTATTTTTCACAAGGAGAAAACCGATGCAAGAGAAAATCAAGGTATTGGTCATAGATGATGATCAGGAGCTTTGTTCCATTATTGAACGCTACTTAAAAAATGCGGAGTATGAGGCGCAGTTTGCTCATACCGGGGCTGGCGGGTTGAACATGGCGCTGACAGGTGAGTATCACTTGATCGTATTGGATATTATGCTGCCGCAAATCGACGGGCTGAGTATTTTAACGGAGATTCGCAAACAGAGTGTGGTGCCGGTCTTGATGCTGACGGCAAAAAATGAAGAGGCGGACAAGATTCGCGGGCTGCAGCTGGGGGCGGATGAT # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTAAATCTAAAAGAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //