Array 1 1636-3123 **** Predicted by CRISPRDetect 2.4 *** >NZ_OACA01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate R805, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1636 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 1702 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1768 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1834 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1900 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 1966 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 2032 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 2098 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 2164 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 2230 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 2296 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 2362 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 2428 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 2494 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 2560 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 2626 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 2692 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 2758 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 2824 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 2890 36 100.0 30 .................................... AGAGCGCGCTGAGGCGTTCGTGGGTTTGGA 2956 36 100.0 30 .................................... TTGGTGGTCGCGCGTGTTAGACGGCAGCTA 3022 36 100.0 30 .................................... CCACAGTTTCTCAGACTGGGAGCAAGATAG 3088 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.3 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //