Array 1 187231-184523 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFEHP010000005.1 Klebsiella pneumoniae strain 1511me NODE_5_length_233781_cov_13.670701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187230 29 96.6 30 .....A....................... CTCACGCTGATACCTCGGAAAAAGACGGGC 187171 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187110 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187049 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 186988 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 186927 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 186866 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186805 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186744 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186683 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186622 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186561 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 186500 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 186439 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 186378 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 186317 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 186256 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 186195 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 186134 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 186073 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 186012 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185951 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185890 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185829 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185768 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185707 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185646 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185585 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185524 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185463 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185402 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185341 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 185280 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 185219 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 185158 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 185097 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 185036 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184975 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184914 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184853 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184792 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184731 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184670 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184609 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184551 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //