Array 1 657455-656168 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNVX01000001.1 Scandinavium goeteborgense strain BIGb0156 Ga0304808_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================ ================== 657454 28 100.0 32 ............................ GAAAAGTGGATCGATGAATTGCGGTGTTGGAT 657394 28 100.0 32 ............................ AAAGATGGCGGCGGACGGATTGCATTATGATC 657334 28 100.0 32 ............................ GATACCGGGTTGAGAAGACTGGCGGGAGGATT 657274 28 100.0 32 ............................ GTAAGTGTCAGTCATAGAACCATTCCCATAAA 657214 28 100.0 32 ............................ GTAAATCACGCGGCCTCCTGCTTCTTCAGGGC 657154 28 100.0 32 ............................ TGGTTTTCTGAAATAGAGTCATTCCCTTCTGC 657094 28 96.4 32 .......A.................... ACCCAACGAGCTGAATATTATGATTGCTCGTC 657034 28 100.0 32 ............................ CACTCGGACACAACAACATTTCGCTGATGAAA 656974 28 100.0 32 ............................ CACTCGGACACAACAACATTTCGCTGATGAAA 656914 28 100.0 32 ............................ TTGTAAGTGCGCCATCCGGGTCTCCGGCAGCG 656854 28 100.0 32 ............................ GGTAAAAACCACAATACATGCGAATGATGCGG 656794 28 100.0 32 ............................ ATGGTATGACTCCTTAGAAGTGGTCGATATAG 656734 28 100.0 32 ............................ GAACAAGTCGATTATTTCGCGTACTCGTACAG 656674 28 96.4 32 ...........C................ AGACTCCTGCTCAATTCCCGGGGTAGAGACGC 656614 28 100.0 32 ............................ AAGCCCCAGGACTGCTGAGACTTCATCAGGTG 656554 28 100.0 32 ............................ TCATGGCCGGTGCATTATCAGGATGCTTCCCG 656494 28 100.0 32 ............................ GGCACCGCCTCTACTGTTGGGGTTGGCTGGTC 656434 28 89.3 32 ....A.......GG.............. ATAACAATCCGGGTGCTGATGCTCGAGGTAGT 656374 28 96.4 92 .......................T.... ACCCAAAGGCATACGCATGAGCAGTAGATGTTGTTTACCGCCGCATTAGCAACCAGGAAACGCCCGGCGGCGCTTCGCTTGCACGGGCGTAC 656254 28 85.7 31 ....AA......T....T.......... ATAGCACTGGATACGGGGAGTGATGATTACG 656195 28 75.0 0 ....A.....AC...A.T..T.C..... | ========== ====== ====== ====== ============================ ============================================================================================ ================== 21 28 97.1 35 GTTCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : CAGAAGACTATTACAACAATACGCGACTGGCACTGGTTGACGAACCGAACGGCGCAGAATGCCTCTGGAATCTTGAAGGGATTCGAGAGGAAGTGAAACGCAAATAATCCATCGCCAACTTAGACGCGCTTACAGCCACTGTGGCGCGTTTAATCATTCTCCGCAGGGTACAAAATTAAAATTAGTGGAACGACCTGTCTACAGTCTCGATATTTTTTAGCAAACTAAATGATATCGACTGGTTCTCTCCGGTTCACTGCCGCACAGGCAGCTTTGAGAGAAATTTCCGCAGAGGTGCAAAAGGCTTTAATCATGCATTCAAACCTGTATCCATTCCCCGCAGGTGGCCTTTTTTTATCCATGACTCTGCAAACCCTTTTTTAGGGTGTTTTGTAATGCGTTGTTTTTGAATGCATCTAAAATTGAAGCAGAAAAAGGGTTATTGAAGGTTAAATTGCTTTTGTTGAGAGCAAACAATAGGCTATGTTGCGTTGCTTTCA # Right flank : CGCCCGGCGGTGCTTCGCTTGCACGGGCCTACGTTCACAGTTTTTAATATCCTGGATAAAAGAGGTTTAACCATTCACGCCTGTTCTGGAATGTGCAGATCTTTTTATTGTGAACGTCATGGCTGCTGTATGTTTATTTAACTTGCGCTTAATTCATTATCTTTAATAGCGGTGAGATGCAAATACATCCGAATTCTTTATTGTATTGTGAATAAATCACGATTCAGGAATATCTTGATTTGCATCATCATGTTTTTTTGATGGTCGGCGCTAAAGTAACCGCTACCTTATTCTGTCTGTTTTCGTACAGTGAAGTGTGAAATGGATATTACCCCGTCCGATCTAAAAACGATTCTGCATTCAAAACGTGCGAACATTTACTATCTCGAAAAATGCCGACTGCAGGTGAATGGTGGGCGGGTTGAATATATTACCAACGAAGGAAACTCGTCGAGTTACTGGAATATTCCCATCGCCAATACCACGGCGGTGATGCTCGG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 659139-658811 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNVX01000001.1 Scandinavium goeteborgense strain BIGb0156 Ga0304808_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 659138 28 100.0 32 ............................ CCACCGGCGCGACTCAAAGCAACGTTATCGGG 659078 28 100.0 32 ............................ AGGACGCGCAGGCAGAAGAGCAGGCCGTCAAA 659018 28 100.0 32 ............................ TCCACGCCAGACCGTGAAATATTAAGTTTTCT 658958 28 100.0 32 ............................ GTGCTTTTGCAGTACACCGGCATTACCTTTGA 658898 28 100.0 32 ............................ GATAACCACTCAGGGTTTCAAAATGAACAAAT 658838 28 92.9 0 ....A...................A... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.8 32 GTTCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : TGCCTACCTCGATGCCCTGAAACTGGCCTTCGATGAGACACTCAGCGATCTGCGCATTATTGAACTGACCGTGGATGAGATACCGCTGGAGGAGCCAAACTGGCTGGTTGCGGATTCCGATACGCAGTATGAGTATTGCCGGGTAACGGCGTCCTCGCTGTTACACACGGAAGATGAAGCCGATGCGGCAACGACCGCCGGACTGCTGCACGATCTCGTCTGCTTTATGTGCGACGAACTCAAAGCCCCTCGATTTGTTTGCGCCGAACCTCAAACTGCTTAAACCAGCCATTCATGCCGGGACGCGTTCCCGGCGGTTTACCCCGATTTTCATCCCCGCTTCTGACTGCTTTTTATATCCAATCCTGCTAACCCTTTTTTTAGGGTGTTTTGTAACGCATTGATTTTGTGTGTATTTAGAATTGAACCAGAAAAAGGGTTTTAAAAGGAAAAATTGCTTTTGTTAAGAGCAAACAATAGGCTATCGAGCAGTTCCTCCA # Right flank : ACGTCTGGCGGCGCTACGCTTGCTCGGGCCTACATTCGCGGCCAGAACTGGCAAAGATAAGTCTGTCCTGAATGAGTCATAAGAAATTTCATGTGAAATAACTCACCAATATTCGTTTCCGTTAGGAGTACGATCAGCAGGAACATATTACTTCTTTTGGGATTAAAAAATGTTTTACCCAAATTCGGTGAGGGTGGACGAAGGCTGTTAAGTGTTGGTGGTTCAGCTTACAGGTTGTCCTGACGCGCTACGGCTTAGCAACGAATGGTACGAATTATAAAGAATTGCACCATAGGGATTCAGTCAAACTCTCATATCCCGATACCTTTTTCACAGTCAATCTGGAAAGGGAGTGATGTATAACGCTACGTATGCAATTGATGGAAAAAAATCATTACAACACGTTCATTATAGAGACTGAAAATAACATTTTGGATCGAGGGAAAAGAGTATGTCTTTACCTGATTACCGTCCGTTAGTAAAACAAGGCCATGACGCAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //