Array 1 163668-166259 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKNI010000005.1 Nocardia sp. NEAU-G5 Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 163668 29 96.6 32 ............G................ CGGAGATGGAGCGCCGCTACCTCGAGATGTTC 163729 29 96.6 32 ............G................ CCACCGCCGACACCCGCGCGAAGGTCGATGAG 163790 29 96.6 32 ............G................ AATGCGACCTGTCCGGCCAGGGCCTCGGCGAA 163851 29 96.6 32 ............G................ TCGTGCAGCAGATGCCGGTTCAGGGTCGCGGA 163912 29 96.6 32 ............G................ CCATGGTGATGAGGCCGGCCAACTCGTGCAGA 163973 29 96.6 32 ............G................ GGATCTGCCTGGGGTGCCCGGTCCGGCGGGCC 164034 29 100.0 32 ............................. GCGGCCATCAGCTCGGCCTCGGTCTCGGGGCT 164095 29 100.0 32 ............................. TGGCCAAGGCCGCGGTTTCGGAAGGCTGTGCG 164156 29 100.0 32 ............................. TGGAATGCGCGTGCTCGCGGGCGCCTGGACAC 164217 29 100.0 32 ............................. GCGATGGGGCCGGACTACGGGCCGCGCGACTT 164278 29 100.0 32 ............................. TCGCGATTGTCGGTCCCGGCGCGTCCAGGAGC 164339 29 100.0 32 ............................. CGGCAGGTGCGCTACGCCTACGCCGCGCTCGG 164400 29 100.0 32 ............................. ATCACGGCCTCATGGCCTTTCTGTGTGAGTGA 164461 29 100.0 32 ............................. GTCGTCAAGCTCTGCGGCTCGGTCGGCATCGA 164522 29 100.0 32 ............................. CAGAACTTCTCGGCGAGGTTGGAGCGCGTGGT 164583 29 100.0 32 ............................. ACCGGCTACAGCGGTATCGGCGTGGTCGCCGA 164644 29 100.0 32 ............................. CTCTGGCACGTCCCGGAATGCGTCGTACGCGA 164705 29 100.0 32 ............................. CACTTCGGGAGTACCTCGACCGGAACGGCTGC 164766 29 100.0 32 ............................. GGGACCGCGGACGCGCTGCCGACCGCGATTCG 164827 29 100.0 32 ............................. CCGAGGCCGCCGACTGGACCCACCGTCACGCC 164888 29 100.0 32 ............................. TCTCGCACCTGACCCGCAAGAACGCTCCCGAG 164949 29 96.6 32 ............................A GAGAACGCCGCATACACGGGCACGGGCGTCCC 165010 29 100.0 32 ............................. TGGTAGCGCACGACCATCTCGAGGTCGCCGGG 165071 29 96.6 32 ........................T.... CCGAGTTCGTAGGCGAATACGGCGGTCGAATC 165132 29 96.6 32 .....................A....... TCCTCCAGCAGCGGAATTAGCCACTCCGCCAC 165193 29 100.0 32 ............................. AGCGCACAGGACGAGGAGACATTGCAGGCGCT 165254 29 100.0 32 ............................. AACTGCAGCGCGACATCGTCGGGCCGGCAGGC 165315 29 100.0 32 ............................. TGGTTCAAGTCGAGCAAGAGTGGTCCGCAGCG 165376 29 100.0 32 ............................. TAGGTCAGCCACCACGCGGCGGGCTCGGTGGT 165437 29 100.0 32 ............................. GACATGAACCCGGCCAGGCCCGCCAGCCGGGC 165498 29 100.0 32 ............................. CACATTCGCGGTGGTGCCCACCGCGGTCTCCG 165559 29 96.6 32 ................T............ GTCACTCGGGCCGAGCGCGCCATCGACGCCGC 165620 29 100.0 32 ............................. ACTGGTTCTGACACGGCCCCATATCCAGCAAC 165681 29 100.0 32 ............................. GATTGGTAGGTCGCGATGTCCGGTGTCCCGTA 165742 29 100.0 33 ............................. ATGGCCCAGGGCACACGGACCATCGTGGTCGGG 165804 29 100.0 32 ............................. GGCATGAAGGACTGCTTCACCGCGGCGGTGGA 165865 29 100.0 32 ............................. AAACGCATGGCCGGAGGCGGATAGCGGAAACA 165926 29 100.0 32 ............................. CGCATACAGGCCCGTCTTGAAGGGAAACAAGG 165987 29 96.6 32 ........T.................... GAATACCAGCGGCCCGGGTCGAACCAGCCGCC 166048 29 100.0 32 ............................. AAACCAATCGATGGGGTGAGAGAGTAAACGAA 166109 29 100.0 32 ............................. GCGATGACGCATGACCACCACCACGAACGGCC 166170 29 100.0 32 ............................. GACAACCAGAATCCGGCCACGTCGCTACCGCG 166231 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.1 32 GTCCGCTCCGCACACGCGGAGGTGCGCCG # Left flank : CAGAAAGTCATCGACCCCAAAACCGCAGGCGACCTTCCCGACCGCACCAGCGACATCACCCACCTATGGGACCCCAACCTGGGTGCCCTACCCTCCGGGATCAACTACGGCACCGACGAAGACCCCGGATTCTGATGGCAACCATGCTGGTCATCGCCACCACCGCCGTCCCCGATCACGTCCGAGGTGCCCTGTCCCGCTGGCTCACCGAACCCACCGCCGGACTCTACGTCGGCACCGTCACCGCCAAGGTCCGAGACGAACTCTGGGACGCCGTCGCCGCCTCGGTCGCCGACGGCGAAGCCGTCTGCATCCACCCCGCCCCCACAGAGCAGGGCTTCGCCATCAAGACCGCCGGCGAACGCCGCCGACGCATCATCGACTTCGACGGCCTGCAACTCGTGCGATTCCTCCCACCAGACACCCCGGACCCCAACGAAAACCACGACAAACACCGACAGAAATCGCCATCATGCGAATAAAAGCACAGGTCGCGAAGT # Right flank : GCTGGGTGTGCAGGCTTCACGCTGCTGGACGACACCGTGATCTTGGGCCGGAAGATCACGGCCACGGGAGACGTCAGCTCCGCGGACCTATCGGATCGAGCAGCCGCGGTCTCTCAGCTCCGATGCGATCCCCGAGCCGGGCGCCGGGCTAACTGGCCGCGTTGTACGCGTCGATGACGCTAGCCTGGATCCGCCCGCGGCTGGACACGTCGTAGCCGTTCTTGCGGGCCCACTCCCGAACCGCTTTGGTCTGCTCCTTGTCGGCGACAGTGCGGCTGGAGACCTTGCTTTTGGCCTTGGGGATCCTGCCGGCCCTGCGGGCGGGCTCGGTCCACTGCTCGAACGTCTTACGCAGCTTGCCCGCGTTCTTCACCGACAGGTCGATCTCGTACTCGACGCCGTCGACACCGAACACGACGGTTTCCTCCGCTGTGGACTTACCGTCGTAATCGTCGATCAGTTCGACGGTGACCTTCTTCGCCATCCGAGCCTGCTCCTTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCACACGCGGAGGTGCGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //