Array 1 5178176-5177718 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP022870.1 Phytohabitans flavus strain NBRC 107702 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	==============================	================================	==================
   5178175	    30	  93.3	    31	............................GA	GTGCCGCGAAAACCGTTGTCGGCGCGGTATC 	
   5178114	    30	  96.7	    31	............................G.	CGCCGGCGGCGATGAGGCCGAGCGGCAGCCA 	
   5178053	    30	 100.0	    31	..............................	CGCGGTCGATCAGATAAACGAAGCTGCGCTT 	
   5177992	    30	  96.7	    31	.............................T	CCACGCTCGGAAAAGCCCTAAAGTGGATGGC 	
   5177931	    30	 100.0	    32	..............................	CCGTGCCGCCACCGCCCGAAGACGACACCGCC	
   5177869	    30	  93.3	    31	............................TC	CGGATGGATGCGACGGTGCCGACACAATCCC 	
   5177808	    30	  86.7	    31	................T...T.......GT	CGCACACCACGAGGTGGCTCTCGCTCGGCAA 	
   5177747	    30	  90.0	     0	...........A...............A.T	|                               	
==========	======	======	======	==============================	================================	==================
         8	    30	  94.6	    31	GTGCTCCCCGCGCACGCGGGGATGGTCCCG	                                	       

# Left flank :   GGCGCGGATCCGTCGGCATCTGCCCTGGGTCGCGACGCAGCAGATCAGTACACATTGGTTGCGGCATACGACGTTGACGTGGGTGGAGCGTGCCTTCGGATACGCGGTGGCTCGTGCCTTCGCCGGTCACACCGACGGCGGTGCCAACGTTGGCACGACGACCACGTATGTACGTGCGACGTTGCAGGAAGTGGCAGCGGCGGTGGCTGCCCTCACCGGCGAACCACACCCGCTCGCGTAGGTCGAGCCCCCGACGGCCGCGTAAGCGCTCGACGCTTGCGCGGCCGTCGGTAGGGTCGACTGGGACCTGGCGTATGCCGGTTCGTGTCGACGTCTTCCGGGTCGATGCTGGCGTCAGCAGGTCTCGTGGTCCAGCATGGACTCCGCGCAGTCGGAGGCCAGGCCGGTGGCGCGAGATGCATGCCGGCAGACGGCATGACTCGGACGACAAAGTGAATAAAATCCAGCCCACGCGCCCGTAAAGTCCCAGGTCAACAAGT
# Right flank :  GCCCAGCCATCGACCCGCTCTGCGGTCGTTCGTGAAATGGGCCGTCGACCACGACTACATGCCTGCTGAGCTGGACGTCCCGGCCAGCATCAGCCGGGAACAACGCGCGATGCTGGACGACGAGGGACGCCTCGCCCTGGCCCAGCGCCTCCTGCGCGACCAACTCGACGATCCACCCGCACGCCTCGCGGCCGTCCTCGTCCTACTGTTCGGCCAACGCATCACTCGCCTGGCTGCCCTCGACGTCAACGCCGTCACCGTGACCGACAGCCGGACCACCCTGACTCTGGCTGTCACCCCTATCCGGCTCCGCGAACCCCTCGCCTGACTCGCCCGCGAGGTTGCCGGCCACTCCCGCAGGACCGGCTCACGCTGGCTGTTCCCCAGCAGCCAAGGCAACCGGCCGCTATCCGGGGAACGTCTCCGCGACCGAGCCGCCAAGCTCGGACTGACGAACGCACTCCATGCCCGCAATGGCGCGCTCGCGGCCCTCGCCGCCC

# Questionable array : NO	 Score: 5.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCACGCGGGGATGGTCCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCACGCGGGGATGGTCCCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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