Array 1 1-288 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL349582.1 Prevotella oris C735 supercont1.19, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 1 28 100.0 38 ............................ ACTTACCGCTTGCGGCTTCCTTGGTCACGCGCTCACAT 67 28 100.0 36 ............................ ATTGCGTTTGCAGAATGATGTTACACAATTGACGAT 131 28 100.0 38 ............................ TCTGCGAGCCTCAGCAGTAGCTTTGATATTCAATATAT 197 28 100.0 36 ............................ ACTCCTCTACCGACAGGTATTTTTCTTCGCCTACAT 261 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 5 28 100.0 37 TTCAATTCCAATAAGGTTCAATTATAAC # Left flank : | # Right flank : CCCACTCTTTTAAAAGAGATAGGATGGATAAACACTAATGTTTTCAGCAATACAAAGGTAATAAAAATCATTGAAAAAATGTCGATGCCCAATGATATATTTTCCATAGAGCATCGACATTTCCTTTTGTATAAGGTGTTTCAAGAAGTCAAAGAGCAATTTGAGTATCCATAGAAAAATGGAAAGAACTGCTATTCCTACACATCGACAACTTTACAGAAAGTTCTCTGTTGACATTCGCTCCTTGCCAAGAATATCCTTACTCATATGATAACCCTTTTTATTAGAGAATATTATCACACTATCCTCTTTTTTATCAATTAAGTTTCCTATCTTATACTGCAACTCCCGCAGTTTAACTTCTGACAGTTCGCCTTCAAACACAGAATTCTGTATCCAACAAAGATATTGCCGACATAATTTCAGCATTTTACTAACACGCTTCTCTGCCACATCATAAATCAGGATAACATACATACAATTACCAATACATCTTAAAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCAATTCCAATAAGGTTCAATTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 237626-237460 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL349569.1 Prevotella oris C735 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================================== ========================== ================== 237625 38 85.0 26 .CG....AG--............................. TGCTAATCATTTCCTTGGTGTGGTTT 237561 40 100.0 22 ........................................ TAAACCGTTACCAACTACGAAA 237499 40 100.0 0 ........................................ | ========== ====== ====== ====== ======================================== ========================== ================== 3 40 95.0 24 TTCGCAATATCGTTATAATTGAACCTTATTGGAATTGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAACCTTATTGGAATTGAAATATCTTCGTTGATGTAGCGGATAAACA # Right flank : CCGCAGATAGGTTCAAGTAGTGATTACGCGAACGATGTCATTATTGAACCGCATCGGATTTTAGGCGTAATAGATATTCGGGAGGTTATTTACCTGCCAAACATCTATTACGCCAGCCGGTTTATTCTCAATATTCCTTATCAGTCTTGATGTCAAGCCAACCGGGAATGCCATTTTTGGTGATGTGATAAAAAGAACGGGTGGTTTGTTTTATCTCGTCATAGACGGGGGCTTTGTCACGGGGGAAGATCCCTACTTTATTATCTTTGTAGAAATAAATCAGACCATCGGACTGCATGATGATAGAGTCGTTGTCTATTGGAAAGATTATTTTTCCCGTGACTTTAACGGTTGGGTAAATCTCTGTTTTCTCATCCCAATCATACACACGTTTGGTTATTAACTTCGGTTTCACATTCTTCGGCTGCTTATATTCATAGGCCACGATGCCGAATTTCCCTTTTCTGCCTACTCTTATCCATTCCGGGTGCATGTCAATC # Questionable array : NO Score: 4.29 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:-0.80, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCAATATCGTTATAATTGAACCTTATTGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 2 238982-238362 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL349569.1 Prevotella oris C735 supercont1.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 238981 30 100.0 34 .............................. GAAACTCTAAAAACTATTCACGGATATATAGTTA 238917 30 100.0 35 .............................. TCCTCATTGTATAGCATAGATGAGAAATTGTCAAT 238852 30 100.0 34 .............................. TGAGTGACTCTGCGGGTACTATTGATGAAGCCTT 238788 30 100.0 38 .............................. AGCGGCGACAAATTGCTGGCTCGTGTGAACTCGGGCGA 238720 30 100.0 35 .............................. GGCGACATGTGATTTCGATGGACTGGTCTAAAAAT 238655 30 100.0 38 .............................. TTGCTTGCTGCTGGTATTAGTGCTGGTGCTTCGATATT 238587 30 100.0 34 .............................. TATCAACTATTTGAGCGGACAAAAGACGCAATTG 238523 30 100.0 35 .............................. GCTGTTCTGAAAGCTTACCTTGCTTAACAAGACTA 238458 30 100.0 37 .............................. AGGAAGAGAAAGGAAAAGTATATAAGGTGGTGGCATA 238391 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 100.0 36 GTTATAATTGAACCTTATTGGAATTGAAAT # Left flank : AATTGAACCTTATTGGAATTGAAATGGGGAATTGATGTGGAGGAAGTGGCAAGAAATCT # Right flank : TGCTTATTCTCATAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA //