Array 1 177048-180436 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJET01000002.1 Legionella pneumophila strain 2531STDY5467468, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 177048 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177108 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177168 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 177228 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 177288 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 177348 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 177408 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 177469 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 177529 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 177589 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 177649 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 177709 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 177769 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 177829 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 177889 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 177949 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 178009 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 178069 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178129 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 178189 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 178249 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 178309 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 178369 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 178429 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 178489 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 178549 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 178609 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 178669 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 178729 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 178789 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 178849 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 178909 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 178969 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 179029 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179089 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179149 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 179209 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 179269 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 179329 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 179389 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 179449 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 179509 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 179569 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 179629 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 179689 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 179749 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 179809 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 179869 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 179929 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 179989 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 180049 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180109 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180169 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 180229 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 180289 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 180349 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 180409 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //