Array 1 376044-378833 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOZK01000021.1 Burkholderia gladioli strain MSMB1756 MSMB1756_29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 376044 28 100.0 32 ............................ GGGATGGCAAGTGGCGGCCAGTTGAACCCGGC 376104 28 100.0 32 ............................ ACGGCGCTACTCAGCAACGAGCCGTAGTCGGC 376164 28 100.0 32 ............................ CCCATCACGGGGCCGTACAACGGCGCGGCCGT 376224 28 100.0 32 ............................ TGCGCGCGCACCGCGCCGAGGTCTACGTCGAG 376284 28 100.0 32 ............................ TCCACCGAAGCCGCGACCATCGCGTCGGCGAC 376344 28 100.0 32 ............................ ACCAAAGGACGACGGCGCTAACGACGAAAAGC 376404 28 100.0 32 ............................ ATGCGATCCTGACGCATGCCCAGCGCGATGCT 376464 28 100.0 32 ............................ ATGAGGGTGGCTGTCGCGTTGAATCGGTTGTC 376524 28 100.0 32 ............................ TCTCCCGCATCAGCAGGGGCGCGGCCGCGATA 376584 28 100.0 32 ............................ ACGGAATAGCCCGATCCCCTCGGGATATTCAC 376644 28 100.0 32 ............................ GTAGTCGGCGCTCTGCAGCGCAGCCGTGAGCA 376704 28 100.0 32 ............................ CGTGACGCCGGCCAGCTCGGGCAGCCGCGTGT 376764 28 100.0 32 ............................ ATGTTGATGATGACGCGCTGACGCACCGGGTC 376824 28 100.0 32 ............................ AGCACCGACTCCTCCCAGACCGGGAAACCATC 376884 28 100.0 32 ............................ GTGAGGAAGGCGAATATACGGCCACGCTTGCG 376944 28 100.0 32 ............................ GGCCGTCGGGCTCGGCTCGCGCGCCTCGGCCG 377004 28 100.0 32 ............................ TTCGCGAGCGCGGAGCGGATCTTGTCGCGCAG 377064 28 100.0 32 ............................ TCGAACGCGCGCTTCCCTGCAAGCGGTTTAGC 377124 28 100.0 32 ............................ TCGGCAGCAGCGTCGGCCGCCTCGGTGTCGTC 377184 28 100.0 32 ............................ TCGTCGAGCTGATCGAGGAAGTGCAAGCCATG 377244 28 100.0 32 ............................ TTCCCTGCATCGCCGGCGCAGTAGCGCGCCCA 377304 28 100.0 32 ............................ AGTAGGTCAGGTCAGTTGCATCGAAGGGCGCG 377364 28 100.0 32 ............................ TTTCGACTGCGGCCGACAACTTCGAGATCAAT 377424 28 100.0 32 ............................ TGAAGAAGACAGAGGCGAGCGCCCCGCAAATC 377484 28 100.0 32 ............................ GTCCCTTTGCCGCCGCCGAGCAGCCGGCGGAT 377544 28 100.0 33 ............................ AGACCGGGAAACCATCCAGTTCGCGGATCGCGT 377605 28 100.0 32 ............................ ACTACGGTACGCGCCGGGCTGGCTGCGATTCG 377665 28 100.0 32 ............................ GCTACGAGCACCGAATCCTGTTCGAGGGCATC 377725 28 96.4 32 ...............T............ ATCGCTTACCCGTCGCATGACACCTCCTGTTG 377785 28 100.0 32 ............................ GTAAAGAAACGACCTCTCACATCCGAAGAAAT 377845 28 100.0 32 ............................ TGGTGAGCGCGACTGCCGCATCGTCCAGGCGC 377905 28 100.0 32 ............................ GCTACAGGAGAACGACGTTGAAAACGCCAACG 377965 28 100.0 32 ............................ ATCCGCCTACAGGAGACGGAACGACAGCAGCC 378025 28 100.0 32 ............................ GCAGAAAGCCGAGTCACTCGGGACCACCTTGC 378085 28 100.0 32 ............................ ATTCGAACGCCAAGACGTTGGCGCCGCTCCTC 378145 28 100.0 32 ............................ TCAGGGCGCGCAGGGTGGAAAGGGAGGCGAAG 378205 28 100.0 32 ............................ AAGGACCGGCTCCGCGTGCGCACAAGTTCGAA 378265 28 100.0 32 ............................ GATACAGCGCGTTGCGCAGCGCCGAGTCGAAC 378325 28 100.0 32 ............................ GCTGGCGAGACGACGAACCTCAAGGACATCGC 378385 28 100.0 32 ............................ TCCAGCTTCGGTGATGCGCGCAAACTCGATGA 378445 28 100.0 32 ............................ ACCACCAACGAGAGCAGCAAGCCGGCCTGGAC 378505 28 100.0 32 ............................ AATAGCCGGGATAACGGAGACGTGATAGAAAT 378565 28 100.0 32 ............................ TCCGGCCGGAAGTCGGCCGCCGGCGCCGGCAC 378625 28 100.0 32 ............................ TCCGTGTTGAGAATTACACCAAGATCGTCTGC 378685 28 100.0 32 ............................ ATCAGGTCGTCCACCTGGCGATCGAATTCGTC 378745 28 96.4 32 ............A............... ACCAGCAATCCGCGCTTGATCAACTCGACGAG 378805 28 92.9 0 ...........T.C.............. | T [378829] ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.7 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGGGTGTTTGCTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : ACTGCAATATGAAAGTACGGTAGACGGGCAAGTTTTGCCTCCAGCGCGCGTGTTTTAAAATCGCAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGAGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATGCGCGCATGTTCGCACCCGATCGCGGCACAGGCAGCGCCACGAACCAGACAGAAAACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCGTCACCTGCTTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTATGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //