Array 1 3510-1346 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLE01000012.1 Streptomyces sp. TSRI0281 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3509 29 100.0 32 ............................. AGTTCAGAGACGCTGTACGGAGGATGGGCATC 3448 29 100.0 32 ............................. CGCGTCGGGAGACTTGAGGAGCAGTGAGATGA 3387 29 100.0 32 ............................. TTCGCGTTCGATCGCGGACTGGCGTCGGTCCT 3326 29 100.0 32 ............................. GACATCCTGGCGATGGCCAAAGCGATCAACCA 3265 29 100.0 32 ............................. CTGCATGTCCGGGAGGTGCGCGCCACTCTCGA 3204 29 100.0 32 ............................. CTCTGGGGACCGCGTAGCCGCGCTGGGATGGC 3143 29 100.0 32 ............................. GCCCCCCAGACGATCACGACTGAGGGGCCAAA 3082 29 100.0 32 ............................. GTCGGGGACGCCTGGACGCTGGACCGCACGAA 3021 29 100.0 32 ............................. TCCGAGGGTGACGGCTGGCCGGAGGCCATGGC 2960 29 100.0 32 ............................. GGTGTCACCACGGGGAGGAGGTCCCGCAGGAT 2899 29 100.0 32 ............................. CATCCGGCGTGGCAGGTGTGGAGGGAGGCGGC 2838 29 100.0 32 ............................. CCCTCGGTGAGGACCATGCAGTTGGTGAGGAC 2777 29 100.0 32 ............................. CGCCGCATCCTGTGGGTCCGCCTTGACCCGGA 2716 29 96.6 32 ...............A............. TTCGTGCGTGCTGAACTGCTGCTCCAGGAGGA 2655 29 100.0 32 ............................. GTGGAGGATCCAGTTGCCTGGTTCCGACCGAT 2594 29 100.0 32 ............................. TGGCCAGGTGGCGAACGCCTGGCCATCCTCCG 2533 29 100.0 32 ............................. GCGATCCCCTCGGCCGTCTGGAGCTCGGACAC 2472 29 100.0 32 ............................. GACAGCGAGGAAGGCGCCGACCTCCAGTTCGC 2411 29 100.0 32 ............................. GTTGTCGACCAGACCGCCGTACCCGGTCATGA 2350 29 100.0 32 ............................. ATCTGTCCGGCGGCCACGCTGGTCTGCGACGG 2289 29 100.0 32 ............................. CCCCGGGTGGGGTGGCGGCACGACCAGTTCGG 2228 29 100.0 32 ............................. ACCTCAAAGGCGCCGCACGCTCCGTGCGGCGC 2167 29 100.0 32 ............................. TTCGAGCTGGCCGTGGTCCTCACCCCGGTCGC 2106 29 100.0 32 ............................. GTGTCCTCGTTGAGGGCGACGGCGTACACGGC 2045 29 100.0 32 ............................. ACACCGGCGGGGGCAGTTTCTCGTCCTCGTCG 1984 29 100.0 32 ............................. CTCGCCGCCGACACCGAGACCGAACAGTCCGC 1923 29 100.0 32 ............................. CCGGGCGGCCTGGTCGTCAGCGTGGCCGGGGC 1862 29 100.0 32 ............................. GGCACGAGGGCGCGGGCCTGGCGCTCGGCCCA 1801 29 100.0 32 ............................. TGAACGTCGCCGCCGACCTGGTCACCGCCGGA 1740 29 100.0 32 ............................. CCCTGGGCCTCGAAGCCGTCGACGAGCTGGCG 1679 29 100.0 32 ............................. CCGGAACGGCGGGCACCGTACGACGCGCTGGT 1618 29 100.0 32 ............................. CGCCGGTGCACGGCTCTACACGTAGTCGAACT 1557 29 100.0 32 ............................. GGCCAGACCATGGACCGCACCCCGCCGCTCAC 1496 29 100.0 32 ............................. CTGTAGCCGTTCATCCGGCCCGTGGAAGCGAC 1435 29 100.0 32 ............................. GGGAGTGGTCCTGGCGGCCGGTGGCTACGGTC 1374 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.9 32 GTTCTTCCCGCGCAGGCGGGGGTGGTCCG # Left flank : AGGCAATACCCGCGCACTCGCCACCTGATGCCTCAGCGACAAGGAACCGTTGTCCCCCGCCAGACGGCTCGCGAACGCATCATCGGCCAGCAGCGCCGCAGACGACGCGTGCCTGAGCGCATCCCGCTGAAACTGGAACCCTCGTTGAATCTTCCCCACATCGTGCAACCCGGCCCAGAACGCGACCAACGACCGCGCCTCGTCCGACTCGACCCCCAGCTCCCCCACGATCGCCTCTTGCTGCGACCTAGCCAGGAACCCATCCCACAGTGCCCCGGCCACCACCCCGGTATCCAGCAGATGCCCAATCAGTGGATAGGGCTCCACGAGCCCGTGCTCCTTCCCCCACACCCGAACATCGACCATCGCTCCCCCTCCGCCAAGCTCATCGGTCAGACCTGGGCATTCCATCACCGACCTCTGACACACTGACCGGTATGAGCCAGCGGCGACCAAGTCAAGAGATCGCAAAGCCTCTGAAAACCCGCAGCTCGTAAAGG # Right flank : TCACCGGTTCTTGTGGTCTGGGTGCGTAAAACCCGCAGGTCAGGAACTGTGGTCCCCGCAGGCGCGGGGATGGTCCCATCAACGGTATTGCTACCCGCTTTCTTGTTGAGTGGTCCCCGTACGTGCGGGGATGGTCCCACCTTCGGCGACAGCTCGGGTATGCAGGTCAAATGGTCCCCGCACTGCGGGGTTGCCCCCTCCGCCTTCGGGCGGAGGGGGCTCTTTCGCGCGTCAGGCGTCGGCTGGGGGCTCCTGATGCCGGACCACGCGCTTCAGCGCCTGCTCGACTTTGTGCCAGTTCTGCCCGGTGGCACCTGCGTGGTCGGTGATGGCCTGCGGTACGGCCCCGACCAGGCAGCCGCTGGGACCGGCACACAGAAAGGGCCTTGCCCCATACCCTGACAGTGACGAGCTGTTCAGAGAGGGGCAAGGCCATGCCGAATGATGCTACCCCGGACCCGTACACCGACCCGATGGGATTCGGTCAGCGCATGCAAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.40,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 134652-134440 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLE01000015.1 Streptomyces sp. TSRI0281 scaffold22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 134651 29 93.1 32 ..................C.........C AGCGGCGTCGTGGACATCGATCTGATCATCGC 134590 29 100.0 32 ............................. ACCAGGACGGCACCTTCGACGGTGTCGCCTGC 134529 29 100.0 32 ............................. GATGTGTGTCCGGCGTTGAGGTCCAGGACGCG 134468 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTTCTTCCCGCGCAGGCGGGGGTGGTCCG # Left flank : AACCACACCTCGCCGACGGACACGACCACTGCCGGCGCCCCGACTGCGCATGCCCCTGCCACACCACCTGAACGGACCCACGATGACCAGCGCGACGCTTCCCACCCCGACCGCGAACGAGGAAGGCGGGCAGGGGTGCTCCGGATGCGGCACCACGAAAGGGACGTGCCACGACCCCCGCCGGCACGGCCTGATGTGACGATGGTGACCGTGATGTGTCCTCACTGCCACACGCCCATGGCCATCGTCGGACCCGGCCACTGGGCCTGCACCACCTGCCCGCGCATCGCGCAATCCGGGGACACCGATACCGCGATCGAGCAGCGGGAGACCAATCGTCGGGCAGCGCTGGACCTCCTGGACGCTGCGCTCGGCCCCAGGGCCGTACAGGCGGAGACCGACCGGAAGATCACCAACGAGATGGAGACCACGATGGGCCAGACGATCGAAACCCAAGGGTGCCCGAAGTGCCACAGCACCATGTACCGCACCGTCGACAC # Right flank : CCCACGCCTCACTCCCCGTACGGGTCGCCGCCCTGGACCTGCTCGGCCCCGGACAGCCCGTCGTCCTCTCCGACCCCGACGGCGACCAGAGCGCCGGCATCCCCATGACCGCCCTACTGATGGGCTGGGCGCGGTACCTCGCCCAGGAGTTCCCCGCCGTGCACCGGTGCTCGGCCCTGGCACGGGGCCGACGTCCCCGGCCTGTGCCGGTGGCTGACGGCCTATCTGCCGTACGCGGTCACCCGCCCGTGGATTGACGAGCTCTACGAGCAGGTGCAGCACCCACTGAAGCGAGTGGAACGCGTCACCGACCTCAAGCCGCGCGTTCGCCCCATGGATGCCCCTTGCTCGCAGTGCGGCGCGTTCGGCCTGGTGGAGCACCAGGAGGAGCTGAACATCCTGTGCACCGTCTGCCCGGCCGTCCTCACCCCCGACGAGTACCTCGCCCACCGCGACCGCGTCATGCCCACCCTCGCCGCCCTCGCCCTGCGCATATCCGC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.40,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 75199-75898 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLE01000036.1 Streptomyces sp. TSRI0281 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 75199 29 100.0 32 ............................. TACGCCCTGGGTATCGACCTGGAGGACAGCGC 75260 29 100.0 32 ............................. TGCGTGTGCCCGGCGGGCGTTTGGCGCGTACA 75321 29 100.0 32 ............................. GCGCGGAGACGACTTACGGAGGGCTCAAATCC 75382 29 100.0 32 ............................. GACTTGGTCGGCCCGGAAACCCCGGGCGCGCC 75443 29 100.0 32 ............................. GGAAGTTCGAGCGTTCACCCGATGCGCGGGCA 75504 29 100.0 32 ............................. GGGCCGCTTCATCAAACCGGTCCAGGGCGGCT 75565 29 100.0 32 ............................. GTGTGCACCGATCGTTCCCGAGCTCCGTGCGC 75626 29 100.0 32 ............................. ACTCATCCAGATCTCCGTTTTGGGGATGTGAT 75687 29 96.6 32 ........T.................... GGGAAGGCGATTTTCACCGCCGCGAACGGGTG 75748 29 96.6 32 ........T.................... ATCCCCGCCGACGAACTGCGCCCCACCTGGAC 75809 29 96.6 32 ...A......................... GCCGTGGTGCGGTCCGACCGGGACACGGAGGT 75870 29 69.0 0 ...A.......AAA.A......CA..T.A | ========== ====== ====== ====== ============================= ================================ ================== 12 29 96.6 32 GTGGTCCCCGCGCCTGCGGGGTTGGTCCC # Left flank : CGTCCGCCCTGCCCGTGAAGTGGTGGAAGTCCACCGCATCCGGCGCGCAGTCCGATTGCGTGGAGTGCGGAATCGTCGATGGCGCGAATGTGGCTGTCCGCGACAGCAAGACCCCGACCGGGCCAGCTCTGGTCTGCGGTAGTGAGGCTCTGTCAGCGATGGTGACGGCTGTCGCGACCGGAACTCTGTGATCCCACTCGAACCCAGAGGGGCTAGTTCGCCCGCGAGAACGTCGCCTGTCAGCCCTCTCTTGCGGTGCACCTGCGCCGTCCCGACCACTCCAGGATGGGTAGGCCACGGGACACCTGAGGCGAAGAAATGAGTCGTTGGATCCAGTGAGTACAAAAGCCTCAACTGACAGCTGGTCACAGCAACACATGAGAACCGCAGGGGCAACCCGCGGCACGCGGCCACTGATGTACCGGAAGCTCCCTATGCCCGAATTTCGCAAAGTAAGTAAAAACAGGCCCCTGCCCGCCTAAACACACAGGTCAGCAACT # Right flank : ATACCCGCCACACCAAAAAAGGCGATATCGCCTGCTCCCCGCACGCTCCGTCTGTCCACGGCGCTCCTGGCGGCTCTCCGCGCGCCCGAGGCGTTGGTCCGGCCGGACTTTTACGCCGTAAAGAACCGAGGTAATGCCGCTTGCCAGCGGGTAGGCCCTGAACTGCCATCACCAGCCGCGCACCCAAGGCACGGCCCCCGGCGCATGGGACTGTCAGCACCACACGGCCCACCGCATCATGCAGCGGTGGAATGAAGACGGAGCGCTCCCAGAGCCTTCCTCACCCCAGGAGCTCTCATCCTCATCAGCTTGGCCAAGGCAATCGCTGATGCCAGTCACATGTGCATTCGGCTCGGAAGCACAGACCGTGCGCATCCGAGGCATCCATGATCTTCACGCCTCGGCACGACGCGCGCTCAGGACCCACAAGCGTGGCTTCGCACCGATCAAGCATGACTGCGGCAGCACGTGCAAGTTCTCGCAGGCGGCTCAGGTGAAGG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 78478-80397 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLE01000036.1 Streptomyces sp. TSRI0281 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 78478 29 96.6 31 ............................G TACTGCAAGCACGGAAGCCCAGCGCCCCTCC 78538 29 100.0 32 ............................. GGGCCGTCTACAGGGTGCTGCTGGACCGTCAG 78599 29 100.0 34 ............................. CGCCCGCCGCTGAGTGAGGCCCCCCCCCGAAGAA 78662 29 100.0 32 ............................. TCCCGCAGCTCCCGGTCGGTGTAGACGGCCTT 78723 29 100.0 32 ............................. CGAAGGACGAGGACAGCATGAGCGACATCACG 78784 29 100.0 32 ............................. GAAAGCCCAATCCTTGAATTCAGAACCCGTCG 78845 29 100.0 32 ............................. TGACCCGGGAGGACAAGGTCGCCGCCGCCGTC 78906 29 100.0 33 ............................. GCGGAGTCGTACATCATGCGGCCGTCGTCCTTG 78968 29 100.0 32 ............................. TCCCGCTCGTCCATCTTCAGCCGACCTTGTGG 79029 29 96.6 31 ............................G CATTGCGGATCTTGCCGTCCATGATGCGGTG 79089 29 100.0 32 ............................. CGGCAGGCGAAGGCCAACGCTGCCGCGCAGGC 79150 29 96.6 32 ...G......................... AGGTCGGCGAATCCGGCGTACTTCCCGGTGGC 79211 29 96.6 32 ...G......................... GTCGCCTTCATCACCCTCCGGACTGTCCGGAA 79272 29 96.6 32 ...G......................... CGGTCGCATCGGCGAGTACGCAGGAAGGAACC 79333 29 96.6 32 ...G......................... GGGGGCGGCTCCGAGCCCTTCAAATGGATGGG 79394 29 96.6 32 ...G......................... CGGACACGGATCCGGACGGGGCTCAGGCGCTG 79455 29 100.0 32 ............................. CAGCGAGATGCAGGCGGGATCGAGGTCGTACT 79516 29 100.0 32 ............................. AGCACCGAAGCCACCTCGTGGCTCTCGACCCG 79577 29 100.0 32 ............................. AACCACACTACTGGCGACACCACCATCTATCT 79638 29 100.0 32 ............................. TGCTCGCCCGCCATACCCAGAGCGGGCGTCTG 79699 29 100.0 32 ............................. CTCGACCACACCACCTACCTCCTGACCGTCCA 79760 29 96.6 32 ...G......................... CCATCGAGGTAGGGGAGTCCGTTGCCGGACCG 79821 29 96.6 32 ...G......................... TGCCTGAGGTAGCGGTTGGTCTTGTCGCCGTT 79882 29 96.6 32 ...G......................... TGGGCGGCGAACCCGCGCAACTCCCGGCCGAC 79943 29 96.6 32 ...G......................... TCAATTCGGGTGCGGTAAGCGGGCTTGGTCTC 80004 29 96.6 32 ...G......................... GCCAAACCGGCTGCCCGTCACCCGGGCGAGTG 80065 29 96.6 32 ...G......................... TGCTCTCCCTCCTCCAGGCGCTCGGAGGCGAG 80126 29 86.2 32 ...G........TG..............T CCGCCGTAAGTAACATGATCTTGCCCGGCTGT 80187 29 82.8 32 ...G.........AC.........AC... TGGTACGGGAACAGCTTTCCGGTGAACATCAG 80248 29 72.4 32 T..G.......AGAA......G......T CCCGACTCGCCCAGGCACTGGCTCCGGACCGG 80309 29 79.3 32 ..CG.........AC......C...G... ACCGCCGTAAAGCCGCTCTGAGTGTCCGGGGC 80370 28 75.9 0 ...G......TA.ACA.........-... | ========== ====== ====== ====== ============================= ================================== ================== 32 29 95.4 32 GTGTTCCCCGCGCCTGCGGGGTTGGTCCC # Left flank : ACCAAAAACCATGACTATCGCCGATTCTTCAACTCTGGCCGTGACCTGGTGGAAGTCCAGCGCCTCACACGCTCAGTCCGACTGTGTCGAGTGCGGCACTGTCAGCCCGTCGACTGTCGCCATCCGCGACAGCAAGTACCCGGCCGGCCCCGCCCTAGTCTTCAGCAATGAAGCGCTCGCGGCGATGGTAGGGGCAGTAGCAACCGGACGCCTGTGACTCACCGCGACGCGCGGCGGTCGCTCCTGCGGTACGCCTGCGCGGTTCGCAATCCGGCACGTGCGTTGACGTCAAAAGAGTGCTTAGTGACGGATACCCGCGCCCGATGTCTACGGTAGCTACGTCTACCTCAACGAAGAGCGGGACACAGAGGCACATGAGAACCGCAGGGACGACATACGTCAAGGAACAGCTGAAGGACGGCGATAAGTTCCCTATCCCCGAGTTTCGCAAAGTAAGTAAAAACAGCCCCCAGGCCAACTAAACGCACAGGTCAGCAACT # Right flank : CTCCAGCCGCCACCGCACCGCACGGTCGAGCGTCGCGAGCCTCGCGTACGCAGCGCCGCATCTTGTGCTCGCTCCCATCGGCCGTGGTCCCCGCCGGTACGGGCCGGCCGCTCCACGCCAGCCTCCCCCGTGTCCCCCGCGTCCCCCGCGTCCCGGAGATCGGGATCGTCGCGGCGCTCCGTGCCCACAGGGCCCGTCCCAGGCGGACGGAGCCCCCTCGGTGCCGGGCGATGAGGTACGACGTCAAGCGCCCACACCCCTCAGCACCACACCCCACCCATCAGCCCCACGAGTAGCAGGCAGCCGACCGAACAGGCTTCGCAACCAAGAAGCCACCGAGCATCCATTAACCAAAGATCTTGAGCATCAAACAGTCACCTTCGGTCAGTTCTCACCGATTTTCGAATAGCCCGCCTCACCCCGCACCACGCGCTATCGAATGGCCCCATGTCCAGCGATCTTCCCGAATGTCCCACCGCGTACAACGAGTTGTCCGCCGC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGTTGGTCCC # Alternate repeat : GTGGTCCCCGCGCCTGCGGGGTTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 90718-91601 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWLE01000036.1 Streptomyces sp. TSRI0281 scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 90718 29 100.0 32 ............................. GGGCCGCCCTTGACGAGCCAGCAGGGCTCACC 90779 29 100.0 32 ............................. GCCGCAGCGACGGCAGCAGTCGCCTGACCCCT 90840 29 100.0 32 ............................. CAGACTGGTTCGGGGCTGCTTCGCTTTGGAAG 90901 29 100.0 32 ............................. TGCCAGGACGGCCCCCAGGACAAGCGTCACGA 90962 29 100.0 32 ............................. TCCGCGTCACCCGGGCATCCCGCCGCCGCTGG 91023 29 100.0 32 ............................. ACCATCGCTCAGGCGTTCACTCCGAGCCCCCA 91084 29 96.6 32 ............................T CTGACGAAACCGCCGAAGCCGCCGAAGCCGTC 91145 29 100.0 33 ............................. TGACCGCCCCCGGAGGGGACACCATGATCAACT 91207 29 100.0 32 ............................. GTGCGCGGTCCAGAGGTCGCTGGCGCGGAAGT 91268 29 100.0 32 ............................. GCGCTAGTCGACTAGCGCTGTCGTGCTTTGCG 91329 29 100.0 32 ............................. ATCCGCGTCGGATTGTGCGGTGCGCCAGGCGT 91390 29 100.0 32 ............................. ACTCAGTCGCAGGTGGACCAGGCGGAGAAGGT 91451 29 96.6 32 .C........................... GTCGACCCCTCCTACGTCTCCCGCCTGCTCTC 91512 29 96.6 32 ..............C.............. TCTTCGGCGGCCTCTCGGTGTTGCGGCTCGGA 91573 29 86.2 0 .........A...C.......C...C... | ========== ====== ====== ====== ============================= ================================= ================== 15 29 98.4 32 GTCGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GACGAGCCCCTCTGGTGACCGTCATCGTTCTCACCAACTGCCCGGTCGGCCTACGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCGCCCGGCGTCTTCCTGGGCGCCCCTTCGACCCGCATCCGCGAAGTCCTGTGGAACGAGGTGCGCCAGTACGCGGGTCAGGGCCGCGCGCTGCTGGCCTACCAGACGAACACCGAACAGGGCTACGCGTTCGAAACCCACGACCACGCGTGGCACCCGACGGACCACGAGGGCCTCACCCTGATCCGCCGTCCGAACCCCACCGCACCACGCCCCCCGAAGGGACCGGCCGACGTCCCCCGCCAGGGCTGGAGCAAGGCCGCCAAGCGGAGGAAGTACGGGGGGCGGTAGGGGGCGTCGGGAAGGGAAGACGTTCACGCTTCTCCGAAAGAGAATGAAAGGCCCGCTATGCCGGAATCCAAAGAAGTAAGCAAAAACAGGCTGCGGCCCGAATAAAACCGCAGGTCAGCAACT # Right flank : CCGGACCGGCAACGCGGCCAACCTCGCCCGCGTGTCATCCCCGCCCACGCGGGGCCACCGCACCTCCGCCAGCCGACGCCCCACGCGGGGTCCACCGCAGCTCCACCAGTCGGCCAGGTGATTTCGAGGTAAGCGCCCCACGCAAAACACCGCGCCCCCGACTCGTCGCGCCCTTGCATAGGCGTCGAGTCCGGGGCGCGGTTCATCGGGGGGCGTCGGAAAGTTAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGATGAGAACAGGGCCTACTGGTCCCCGCCGCAGTCAGGGGGAAGTCTTGCGGCGTGGACCCCACAGAGAGGTCCTGTTCCAGCCCCTCGGATTCCTGCCAGATCCGCTGGGCTCGTCATCCATCCTGCCCCTCCGCGGAAGCCCGCCCTGCGGGCAAAAGACCCCGGTGGCCGGGCCATAGGTCCTTAAAGAGCGCATCAGTGATCGGAAACAGCCACTGGATACGGCCAAGT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //