Array 1 44672-45559 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JTZT01000053.1 Pseudomonas aeruginosa strain AZPAE12421 AZPAE12421_contig_53, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	==============================	======================================	==================
     44672	    30	 100.0	    36	..............................	ACAAGTAGCGGCTCGTCGGTAGCCCAGTTCCCGCGT  	
     44738	    30	 100.0	    36	..............................	GCGCGATCGTCGCTGCGCTAGGCTGGTCTCGAAGGT  	
     44804	    30	 100.0	    35	..............................	TCCGTCAAGGAGCGATGGGTAGATTTCGATCACGT   	
     44869	    30	 100.0	    37	..............................	TGTGACTAAGTGGCTGCTCGTTGCAGTGGGTGTGCGT 	
     44936	    30	 100.0	    36	..............................	GCGCTCATGCGTGACAACGTACAGCAGCACAGCAGT  	
     45002	    30	 100.0	    35	..............................	CTTCGCGCTGGACGAGAACAACGCTCCTCTCTAGT   	
     45067	    30	 100.0	    36	..............................	CCTGGAGAGGCCAGCAGGCCGACATGATGATCGTGT  	
     45133	    30	 100.0	    36	..............................	ACCTGCTCGAGTTCGGCCTGGTGACTCTGACGTGGT  	
     45199	    30	 100.0	    35	..............................	AGCAACTATCGCAAGGCCCTGCCGCTGCAAGACGT   	
     45264	    30	 100.0	    36	..............................	TTGAAGCTCTACGGATCCTTCGGCCTCGAGAACAGT  	
     45330	    30	 100.0	    37	..............................	ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 	
     45397	    30	  96.7	    38	...............T..............	AGCCCCGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT	
     45465	    30	  90.0	    35	...........T................CA	ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT   	
     45530	    30	  83.3	     0	.......TA.G............G.....G	|                                     	
==========	======	======	======	==============================	======================================	==================
        14	    30	  97.9	    36	CGCGCCCCGCACGGGCGCGTGGATTGAAAC	                                      	       

# Left flank :   CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT
# Right flank :  GATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCTCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATTGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT

# Questionable array : NO	 Score: 9.16
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCCCCGCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.80,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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