Array 1 12060-12390 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEVHL010000142.1 Micromonospora sp. STR1s_6 contig_142, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     12060	    28	 100.0	    33	............................	CGCACCGTAGTCGGCGAACGAGTACGGAGTGCC	
     12121	    28	 100.0	    33	............................	AAACTCCCCCCAGCTCCGGGCCCTTCCCCCGTG	
     12182	    28	 100.0	    33	............................	GCCACGTCACCGCGACCAACTCCGCGTCTGGGT	
     12243	    28	 100.0	    31	............................	AGACCCTCGCCCGTCTGCGGCCGCGGCTGCG  	
     12302	    28	  96.4	    33	...........................C	CTGGGCGACGGCGACCGGTCCCGTTCAATACGC	
     12363	    28	  82.1	     0	.....T......T.T..A.........C	|                                	
==========	======	======	======	============================	=================================	==================
         6	    28	  96.4	    33	CTGCTCCCCGCGCACGCGGGGGTGATCG	                                 	       

# Left flank :   TGCCGTCGGCGGGGTGCGCCCGAGAACTGTCAGTAGCGGCCCAGGACGGCCACGGCCGAACTCGCCCGTATCGAATACGCGCTCCTACCGGTCAAGGCTTCAGCGCCGGCCTCACTCGCAGTGGTGGTTGACCCAGACGGGACTGACGGCCCAAGGTCCACGCGGGCGGTAGAGCCGGCACCGTTGCGCCGTCGTTAAGCCCGGCAGCCGGCGAGGGTGATGTTCTGAAGGGGGTTAATGCACGAGTAGGCGTCGGGAGTCGCGTACGATCGATAGGTACTTGATCTTGCACAGGGCTTGTTCGACCATGGTCCGCACCAAGCGGCGCCGCCTGTTCGTCTGCCCTCACTTGAACCCCATCAACTACCCTGTAGCGAGTGCGCTTGCCCTCTACCTACTCCCCTACGGCATCGCGCGAACGAGGATCAAGTGAGGCAGCCTTGCGAAACCTAGTGAATGAAATCTGCCAGGTCGATCTTTAACACCGCAGGTCAAGAAGT
# Right flank :  CGGAGTACAGCGAGTCGAACTGGCTTCTAACCCGTCGGCGGGGCCAGCAGGTACGGCGCCGTGGTGAGAGGCACAGTCAAGACTTGCCGAGTTGCTTAGTCAACGCCAAGCAGCTTGAGGATCGCATGTACAGGCACCAGGTATCGCCGACCCACCCGCAGAAAGCGCACTGGAAAATCGTTGGCTTTGGCCAGGGCGTAGGCCTTGGTGCGTCCGATTCCCAAGATCGCTCCGGCGGTCTCGATGTCGGTGGTGACGCCGAGGCCACGTACCGCGTCGATTGTCCACACCTGGTCCTGCGCCCGACTCGGCTTCTGTCCGTCGCTTGTGGTGGTTGCCATCGTCCTCACCCCCTGAGCTCGTGAGCACGCCGGCATCGGCGTCAGTCCTCACGATGGGAGCAGCCGGTTGTCTGCTGCGTTGCCAGCGGAGCATCCACAGGCCACAACGACGTCAGCAACCACGTAGTTTGCAGCTCTACTGGCAGCCGGGACGCCGAC

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGCTCCCCGCGCACGCGGGGGTGATCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.00,-12.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [55.0-31.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C/E [Matched known repeat from this family],   
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