Array 1 11314-16298 **** Predicted by CRISPRDetect 2.4 *** >NZ_RDRE01000021.1 Corynebacterium gottingense strain DSM 103494 DSM103494T_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================= ================== 11314 29 72.4 19 T.CA....T..TG.T..T........... TAGTTTGGGCGTGAAAGTA Deletion [11362] 11362 29 75.9 57 A.T..........T.......T..G..TG CTGAAGAAGCTAAATGCTAGCATTGTGGACGGCTCCAATAACCGCTGGTCATCAAGT A,C [11365,11383] 11450 29 100.0 32 ............................. TCGCGGCAGCAATGGAACCCGCAGACACCTAA 11511 29 96.6 32 ............................G TCGCGCAATCCGCGGTCGGTGTCGGGGTACGC 11572 29 100.0 32 ............................. CACATCATGCGGGGGCCAGCAGTCGCGTCTAA 11633 29 100.0 32 ............................. TCCGTCGCCACTTGCCTTTCGGCGTCCAAACA 11694 29 100.0 32 ............................. GTGGCAGGAATACCCCTCACCGTCGGCGGCGG 11755 29 100.0 32 ............................. GTGTGCGTGATCATGCAGAGGGCTGTAGACAT 11816 29 100.0 32 ............................. AGCACGCAACCACGCGCCTTATGCAGCTCATG 11877 29 100.0 32 ............................. AGAAAACCGGACGCGCACCGCTCGACCCACCC 11938 29 100.0 32 ............................. CAAATCGGCGGAGAATGGTTTCGGCGCGTACG 11999 29 100.0 32 ............................. AGGAACAAAACTATTCACACCAAAATCGCGGT 12060 29 96.6 32 ............................T TGCTCGCGCACCTCAGGTGCCATCGAGTCGAC 12121 29 100.0 32 ............................. TCGCCATCAACGCCATGCTCGACGTGATCTGG 12182 29 100.0 33 ............................. CCCCAGCGTCCTTAGCTGCGCACGTATTGCCTT 12244 29 100.0 32 ............................. TCGCCGTATCCGTCGTGGTCGATCACAATCCA 12305 29 96.6 32 ............................G TCATCGGGCCACCAGGCTCCGGCTCGCCGAAC 12366 29 100.0 32 ............................. TCTTGCGAGCTGAACAAGCAGCTGAACCGTGG 12427 29 96.6 32 ............................G GAACTTCGGGCCGGTACCCGGCGTGGTGAAAC 12488 29 96.6 32 ............................T ATTCGCATGAATGGAGCCGTCAACCTGCCGGA 12549 29 100.0 32 ............................. AACACAGGGTGGAGGCGAAGACGAACGTCATA 12610 29 100.0 32 ............................. AATTCAATGAGGTCAGCCAGCACCGGAGGGTT 12671 29 96.6 32 ............................G GAACTGAAGCGACTGAAAGGACACGATGCATG 12732 29 100.0 32 ............................. TCGCTCGAGTCCATTGGCGAAGCTGCCGACGA 12793 29 100.0 32 ............................. ATCAAACCGACGCTGTTCTTGACCAAAGCGGC 12854 29 100.0 32 ............................. GCCTTGTCCACGTAGGTGCCATCGCACAAGCG 12915 29 100.0 32 ............................. CACGGCACTGTTTCCAGCTCTCGGTCGAAGTC 12976 29 100.0 32 ............................. GTTGAGCCAGTGGCTTCGAGACGAGGGCCGGT 13037 29 96.6 32 ............................G CGGCGCGTGCCGTCCTGCCCAACATGACCGAG 13098 29 100.0 32 ............................. CGGCATGTACCTACGCCCAGCGCGAGCTGTTT 13159 29 100.0 32 ............................. GACTGTCGCATGCCCGTCACCTCTGGCTGTAG 13220 29 100.0 32 ............................. CGGGACTCCGCAGCTTTTTGCGAGCAGCTTCA 13281 29 96.6 32 ............................A ATCATCGACAAGGATCGGTGCCTGCCGGATCT 13342 29 100.0 32 ............................. TGCCCAACGGCCTGACCACGGGTATCTCCACA 13403 29 100.0 32 ............................. GAGAACATCCTCGAAATGCTCAACGACGCGGA 13464 29 100.0 32 ............................. ATGAATCAGGTCACCGGGCCTGGCCTTTTTCT 13525 29 100.0 32 ............................. TGGGAAAAGCTACTTGACCTCGCAGAAAAGGA 13586 29 100.0 32 ............................. CCCAAGGTCTGCCCAAGTTTTCTACAAATAAT 13647 29 96.6 32 ............................G GTCGCTGGCGAGTCCATTGGTGTCGGCTCCGA 13708 29 100.0 32 ............................. GACCGACCCACGGGTACCGGCGTGGTGCTGGA 13769 29 100.0 32 ............................. GCTTCGACGAACTACTCGGCCAGCTGGTCGTC 13830 29 100.0 32 ............................. GCGACAACGCCCTTGTTGTCTTCTGCCTGGCG 13891 29 100.0 32 ............................. CCTGGTCAGTAGTAGGAGAAGTCATCTTGCGA 13952 29 100.0 32 ............................. AATGTCGAGGACAGTAAAGACCTCGAAGTCTG 14013 29 100.0 32 ............................. CGTTCTCGGTATCGTGGCGAATCTCCCAGGCA 14074 29 100.0 32 ............................. TCCACCGACGCCAGCGAGTGCTCCTCCGCCAA 14135 29 96.6 32 ............................G GGCATGCGCGTCACCGGCAAAGGCTCACTGCA 14196 29 96.6 32 ............................G TCCAGGCAGCTCGCTGGGGTGTGGTTGTTGCG 14257 29 96.6 32 ............................G CTGGGGATGCAGCAGAAGACGCTGGGTCTTGA 14318 29 100.0 32 ............................. GTGGAGATGGGTGGCGGCGCCGGTGGCCAGGG 14379 29 100.0 32 ............................. TCGGTGGAGATAGCCGGACACGGACAGCACAT 14440 29 100.0 32 ............................. CACCCCCTCGCCGACAACGACCAAACCTGGCT 14501 29 100.0 32 ............................. ACCAGGCGAATAGGCACTCCTTGGTTGATGGG 14562 29 100.0 32 ............................. ATGCGGCGCATGGAAACCAGCACTCGTGAGCC 14623 29 96.6 32 ............................G TCGTCTTCCTTAGGGGCTTGGCTTGGCGGGTT 14684 29 100.0 32 ............................. TACAGCGGACCGGGAAGCATCGTCATCTTCGG 14745 29 100.0 32 ............................. TGGCATCCACCCTCGACGAGACCACCGGCTCG 14806 29 100.0 32 ............................. TCCGCGTGGGCACGCGGACGAGTCCAGCAAGC 14867 29 100.0 32 ............................. CCGGCGACCTCACCCCGGACAATGCACGCTTC 14928 29 100.0 32 ............................. TGGGATCACAAGCCACTCGCCGCTGACCACTC 14989 29 96.6 32 ............................G GACCAATGAGTAACACAGAACTCACCCCACAA 15050 29 100.0 32 ............................. CGCCGCAATCGCCCGCGCTGGCAAGAAGAAAG 15111 29 96.6 32 ............................G TCGGTCAGACCACCACTTAGCCTGATCGACCT 15172 29 100.0 32 ............................. TGTGGCTCAAGCGAGTGAGCAAGCTCGCCCCA 15233 29 100.0 32 ............................. TCCACAAATGAAGCAATTTCTTATCAGTCTTG 15294 29 100.0 32 ............................. GCCCAGTTCACCGACCGTGCGTATCTTCCCCT 15355 29 100.0 32 ............................. AGCGCCTTATCCAAATCCGCCTTAGGCTTAGA 15416 29 100.0 32 ............................. CGCTGTGCCCCGCCGTAGTTGACGAGACCATC 15477 29 100.0 33 ............................. CACAACCTCACGGTCAGGCTCACCAGGCACCGG 15539 29 96.6 32 ............................G TTCCGGGAACCGGGATAGTCACGAGTTGGCTA 15600 29 96.6 32 ............................G GTCTGAGTGCCCTGGTCAGTAGTAGGAGAAGT 15661 29 100.0 32 ............................. GCATCGCCTCACGCCACGACTGAAAGAAAGGT 15722 29 100.0 32 ............................. CGCAAACGCCCATTCGGAATCGGACGATCACC 15783 29 100.0 32 ............................. AACAAGTTCAAGAAGGATACTCGTGGTTTCGA 15844 29 96.6 32 ............................G TCGCGGCAAAAGCCGAGTCGGCGAATGCTGGT 15905 29 96.6 32 ............................G TCGCGGCAAAAGCCGAGTCGGCGAATGCTGGT 15966 29 100.0 32 ............................. ACACCACCACCAAAAGGATCACCACCATGACC 16027 29 100.0 32 ............................. TGCAGTTTCTCACTGGTCGACCGTACGGGACC 16088 29 96.6 32 ............................G AACACGGCCGCGAAGTCACCAAAGCCTTCGAG 16149 29 100.0 32 ............................. CGCCGTTCTAAATGGCCAAGACCAACCGGCAG 16210 29 96.6 32 ............................A GATACCTGCTAGGGATACGGTTAAGCGAACAT 16271 28 72.4 0 ..........G..C...-....C.G.TTG | ========== ====== ====== ====== ============================= ========================================================= ================== 82 29 98.2 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GGGGTTCTGCTCAATCTGGGTTTGGAACGGGCGGGTGGCCTTTCCAATGTCGTGTAGCCCTGCGAGCCAAACATAGAGGTTGCGTAGTTGTTCAGTGGAGAGCCCGAGGTTCGTCGACAGTTTGCACTTCATCTGATCGGACACCCATGAGTCGAAGATGGAAGCTGCGACGCAAGCAGTGTCTGCTAAATGCTGGGGGAGTGACAGCGACCCCGATTCGTCACCGGATTTCGCCCAGAGTGCCCGTGATTGTGGGCTTAGCGAGATGAGCCACAGATCGAACGCGTGGGCGAGGTCGCGTGCGAAGGGGGATACGCGATGTCGGTCGTCCATGGTTAGCTCTCCAGTGAAGGGTTGAAACTGCTTGATTAATGTCTGTGTATGAAGTGTAGCGCACTTCATTAGTTTTCACACTTTCAAACCCGAACTAGTTTGAAGTATGGGGCCGGTTATTACGTCTCAGTCTTTTGAGCAGGGCTCTCAGTCGGGATAGATTTGTT # Right flank : GCGGTGCAGCGGATCCCCGGGGAACCCGCAGCGAGGTCCGCACCCCAGTGCAGCTTGCTCCTGCGCCACCCCCGTCATCCAGCCGTGCCACAATGTGCATATGCACATCTACTTCTCCTCCGTCTACGGTTCCACGAAGCAGTATGCCGAGGAGCTCGCGCGTCGCCTCAGCACGACCGTGCAGGAGATACTCAACCACGCTGAAGTGCCCGACACGGCAGCAGAGGGCCCCATCATCGTCCTGGCCCCAGCGCACGGCCCGATGAACGCGGCGGCCAAGTTCGTAAAGTCGCTCCCGGAAACAACGATCCAGGCCAGCCCCACCTGTGTGGTCACGGTCGGCATGACGCTAGACCATGTAGTCAGAGAGGCAGACCCCACGGCGGAACTGCTCGGCGACCGGGCGGACCAGGTACAGCGCTTCTACCTGCCCGGCCGCCTGAACTACTCCGAACTCACCGCGGCCCACGCGGGAGTGATGCGCGGGATCATTGGCGCGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //