Array 1 33007-36674 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQCO010000003.1 Methanobacterium sp. YSL 20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 33007 36 100.0 30 .................................... AGGTCATCCTCCGACACAGGCTCTTCAACC 33073 36 100.0 30 .................................... GGGAGCCAGGACCAAGTGGCATCATTAGTC 33139 36 100.0 30 .................................... TTGACCGTTACAAGTGTAGTTATAATCTTC 33205 36 100.0 30 .................................... ATTGGTAAACGCATACAGCGTAAGTTACAT 33271 36 100.0 30 .................................... GTAGCATAAGCTTTGCCGTCAGTAGATGCT 33337 36 100.0 30 .................................... AAAGTCAAGCTCACACCAGATAAGACTAAG 33403 36 100.0 30 .................................... ATAATATAAATAACAACTTAACCACACTAA 33469 36 100.0 30 .................................... AATAGTTTGTATGGTATCACTTATGAACTA 33535 36 100.0 30 .................................... ATGAACGGTATTGAAATACTAACTATTTTC 33601 36 100.0 30 .................................... GCTAAAGCCGACCATGATAATTCACTTTTC 33667 36 100.0 30 .................................... GAAGTGAAAGAGTTTGTCGAGGAAGCCATT 33733 36 100.0 30 .................................... AATCTATTAATTGCTAGTGTTCAATCTAAT 33799 36 100.0 30 .................................... CGTATCAAATGGCAGTGAATTATAGCCTTA 33865 36 100.0 30 .................................... TCAAGCGAACACTTGGACAGATACAGTAAC 33931 36 100.0 31 .................................... GAACAAATACATTGCCAAACATGCTGTTGTC 33998 36 100.0 30 .................................... TTAAGAAGCATACAGACATCGTATGGTCAA 34064 36 100.0 30 .................................... CGCTCGTCTTCGCTTCTCTATCAGCGCCAA 34130 36 100.0 30 .................................... TGAAGCATTTTCAAAAATGGTGTGATAACC 34196 36 100.0 30 .................................... AAGATATCAAAAGACATGGCGACATGGCAT 34262 36 100.0 30 .................................... TACATATCCTGTTGATCCATAGTAGATTGA 34328 36 100.0 30 .................................... TCACTGCAATTATGATCATAACGAATACAA 34394 36 100.0 30 .................................... TCGGCTCCGTATGGTGTGCGTGATATGTCA 34460 36 100.0 30 .................................... TTCAGCACTCACTGATCTACTCGAGGAAGT 34526 36 97.2 30 ...........................T........ GACATCACAGCAGGCCTAATCACATTAATC 34592 36 100.0 31 .................................... CCAATTGGCCTATATACAGAATTGACTTCAT 34659 36 100.0 30 .................................... GCGACATAAGAATACATGATACAAGAGTAA 34725 36 100.0 30 .................................... TCCTGGTTGGTTATTTACCGGTGATTCTAT 34791 36 100.0 30 .................................... TCACGGTGTACATGACAATATCTAAGTATT 34857 36 100.0 30 .................................... TTAACGGCAATAATGATTACAAGCCAGATC 34923 36 100.0 30 .................................... ATATCTACGATGACATTATCAGTGTTACAG 34989 36 100.0 30 .................................... ACGCTCAGTTAATTTCGATGTAATTTTTAC 35055 36 100.0 30 .................................... ATGCAGTCTTTTTCTCATGTGTGCTTGCCA 35121 36 100.0 30 .................................... GTTGCTTCTTGAATTGAAGCTTGATAATTT 35187 36 100.0 30 .................................... GTCGATATTCACGACCCAGAGGGTGTAACG 35253 36 100.0 30 .................................... CCGCACTCTCTTTCTGTCCTAAGTAGGATC 35319 36 100.0 30 .................................... TGATGACCATGAAAGGAATAGAAAGCAATA 35385 36 100.0 30 .................................... TTAAGGATTAGCATCTGATTATCATCTACC 35451 36 100.0 30 .................................... CCAATAACAACCACCAGGACAAGCACGTTC 35517 36 100.0 30 .................................... TAAAAAGAGCACCAGTACAATGTTGCTCAA 35583 36 100.0 30 .................................... AGGGATTTGGGCGAATAACTTCGAATTGTG 35649 36 100.0 30 .................................... GGTTCAGATTTAGGTTTCTTAACGGTCTTT 35715 36 100.0 30 .................................... CTTGACTAGATCACCCTACACACATTATAC 35781 36 100.0 30 .................................... AAGAAGCCAGCCCATACCGCATCACTGCTT 35847 36 100.0 30 .................................... ATTTTATCTTTGAACTCTGAGGCTGCTTTC 35913 36 100.0 30 .................................... AATTATCAAGATCATAATAGGAGGTAGTTT 35979 36 100.0 30 .................................... TAGGAAAACATGGCAAGGGTTACAACCATC 36045 36 100.0 30 .................................... GAAAGAAGGTTCCTTGTGACTGGAAGTCGT 36111 36 100.0 30 .................................... TGAGTTCAGATACAGTATTAATCCTTTTAT 36177 36 100.0 30 .................................... AAAGACATCGAAGTACTTCAACAGAACCAA 36243 36 100.0 30 .................................... AATGAAGTGCTAGTTGCGCAATTTGTTTGT 36309 36 100.0 30 .................................... GCGTTCATTGTATTATCAATTGTAGTGGCT 36375 36 100.0 30 .................................... CTTTTATTGGGTCAACGTACCAGTAAGTGC 36441 36 100.0 30 .................................... CCTGAAACGTTGCAATGACTTGGTCTTTGC 36507 36 97.2 30 A................................... CCTGAAACGTTGCAATGACTTGGTCTTTGC 36573 36 97.2 30 A................................... GGCAGCTCTTGCAAAGTAGCTGTAAGTTTA 36639 36 88.9 0 ..................A........AC.A..... | ========== ====== ====== ====== ==================================== =============================== ================== 56 36 99.7 30 GTTTTGCTACCCTCTAAATTTTTGCTACTTGAATAC # Left flank : GTTCAAAGTAAACCTTCCCGAAATGTCGTTGAAGACAATTCTAAAGCTAATTGAGTTAAATTTGTATAAAGATGATTCAAAGATGAATATGTACGATATCAATATCTTGAGTTCAATCGAATTGCAAACAAAGATTATAAAAAAAATCGCTACATTAAATCCGCAAAATGAATACATCATCACCATCGAGACGCAAGAGTTGTCGAAGCAATTGATGATAGAAGTGGAAAATCATCAAATTCCCAATTTAAATTTAATAATTATCACAGAAGATAGAATTGATACAAACGTTAATAATGTTGTCAACATTTCGAGTAAAACTATCGATTTTGCAAATGAAGTCGATCTATATAACGAAATAATTATGGAAGCTGATTTTCAAATGTCAATGGAATTGTTAAAAGAATATTTATCTGCCTATATAAAAAAAGATGAAATCTTCGGTCAAAAAATTACAAAATATCTCTAAAATTCAAATAAAATGATATAATAAATTTGAG # Right flank : CTTTTAACTTTGGTCGGTTATGAGTTTCTTAGTTTTTTTGTCACAATACTCAAAGCAAACTTATGGTTTATCCGCTTGAGTATTATTAACTCCTAAGATTGCAATACTAGTACCAACTCTTAAAGCAATCTAATAGATTATTCGCCCATCTATAATCAGTTTCAGACATATTTATACTGCCTGAATTTTTATTTATATATTTTTATCATCTGTTTATTGTATAGCCATAATTAACTTGTTATAATGTTACTAAATACATTTGATTTAATGATTGGAGTGATTTATATTCGTGTAACCTACAATTGGAATTCATTATTCAAAGATATCCCTAAAAATAAACGACAAACCTACCACCAACGCATCTATCAATTCATTGAAGATGTGTCAAAAGTCAATATGATAAATGATCAAATAATTCAAAAATATACCCTTAAAAAGATGAATGGCACGAAGGGTATTTTTAAGTTTTATGCAGATAACGATGGTACTCGATGTCTCAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGCTACCCTCTAAATTTTTGCTACTTGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 1225770-1233805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQCO010000001.1 Methanobacterium sp. YSL 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1225770 30 100.0 38 .............................. GGAGTTTGCTGCCGTAATTCCTGGTTTTACCATGTAAT 1225838 30 100.0 37 .............................. CTACCATTAGGCACTGCTAGGCTGGCAGTGTTCACGG 1225905 30 100.0 37 .............................. ACGTTGGGGTTGGTGTAGTCTTTGAAGAACACTTTAA 1225972 30 100.0 37 .............................. ATGTTTTTCCGGGTTAATGGTTTCTTTTCGTCTTTTA 1226039 30 100.0 36 .............................. CAAAACATGCCCATCCCCTTCCGGGAAAAAGAAGCA 1226105 30 100.0 36 .............................. TTCAGCACCTCACCTGTACCAATTGAAAGTGTGGAG 1226171 30 100.0 36 .............................. ATAAGAATGGGGGTGAATTGTATAGAGTTTATAAGC 1226237 30 100.0 37 .............................. AAACAACACTTTCATAATTAATCCATCTTTTTGGAAG 1226304 30 100.0 37 .............................. CATGTTGGACAAACCATAGTGTTACCCATTCTTATCA 1226371 30 100.0 38 .............................. CTGATTTGATTTGCATGGTTTTGAGCTGTTCTACGCTC 1226439 30 100.0 37 .............................. GAATGCCCCAATACCCATGTGTGATCAATACACCCAA 1226506 30 100.0 36 .............................. TATAGCGTGGTGTAGCGTAGTGGTAACGCGCCGGAC 1226572 30 100.0 38 .............................. CAGTTATCCGGGGATCATGGGTTCAAATCCCATCACCA 1226640 30 100.0 37 .............................. TCATGATTGTGATTGTTTGAATTGTAAAGGAAGGTTG 1226707 30 100.0 37 .............................. ACCTTTTCTACGATGGCTTTAAGTTCATTGTCAATTT 1226774 30 100.0 37 .............................. TGTAATGGAGTGTATGGCATTTTTGAGAGTTGGATTG 1226841 30 100.0 36 .............................. TTGACCGGTCTATAATTCCTTTTTCAATGAAACAAG 1226907 30 100.0 37 .............................. GTTTTAATATCATCTAACATTTCTTTTGGATATTCTT 1226974 30 100.0 36 .............................. TGTTTGTAGATAATTCATTGGTGATACTTTTCAGAG 1227040 30 100.0 37 .............................. TCACTCCCCGGATGGATAATAAGGATGTTTTCCATGC 1227107 30 100.0 35 .............................. ACATCTTCCCCTACTATATCAAGAGTTCCATCAAC 1227172 30 100.0 36 .............................. TGGTGCTGATAATCTGGAAGAAATAACCAAATCAGC 1227238 30 100.0 37 .............................. TATAAAAATAGAAATGAGGGTGTAAATTGGATCTATG 1227305 30 100.0 36 .............................. GTTCTTGCAAAGTCGGGTGATAGTAAGTGTGTGTTA 1227371 30 100.0 37 .............................. AAGTGAGAGGTGATTGAAATGAGGGAAAAAGATTTTG 1227438 30 100.0 37 .............................. CTGATAAGTCCTATGCACCCAGAGATACTTTAAGAAA 1227505 30 100.0 37 .............................. GATTATGATCCAATGAGAAGGTGAAATGTTTATGCGT 1227572 30 100.0 37 .............................. TTCAACAGAGAATTCCAGAATGACGCTGCCGGGATGA 1227639 30 100.0 37 .............................. ATATCATCCAACTCAGGGAGTTTTTGAACTGTACGGC 1227706 30 100.0 37 .............................. ATGGTCAGTTTGCTAAACAAAAAATCACCCGGGCCGT 1227773 30 100.0 36 .............................. CCTATACTATATAAAGGTAATGGTATAGGTAGTATG 1227839 30 100.0 38 .............................. GTAGTGTTTTCCTAAAGTGTTGTGGTAACATTTGGAAA 1227907 30 100.0 36 .............................. TTCGTAGTCTTTTGTATCTTTGCAGGGCTTATTCTG 1227973 30 100.0 37 .............................. GACTTCCACAACCACACTGGCAGGTTACAATATCAGA 1228040 30 100.0 37 .............................. ACATTCACAATACAACCAGATAATGAGGTAAGTACCT 1228107 30 100.0 38 .............................. CAGCGAACATTCCGTATTTGGATCTCAAAATCCTCCAA 1228175 30 100.0 38 .............................. TTACATTTCCCAGGTTAAACTAGTTGGAGCTGTGACAA 1228243 30 100.0 38 .............................. ACGAACATATCATTTAAAGTTCTTTCAAGGTCTTTTAA 1228311 30 100.0 37 .............................. CTAGTTTCGGTGGTTTTGCCCAGTTTACCAGTTGCAG 1228378 30 100.0 36 .............................. TCTTGATTCCAATCATGAGAGCGAGGTATTTTCTTC 1228444 30 100.0 36 .............................. AACCTTCCCAGATAGGTGTGATTGGGCCTTCAAATA 1228510 30 100.0 36 .............................. GCTGATTTGTCAACGCCTGTTGCTTGTCCAGGCCAT 1228576 30 100.0 38 .............................. CAAGAGTTCAATGAAAATATAAAGAAACTTAAAGGCCC 1228644 30 100.0 37 .............................. GACACTGTAAACAACGGAGGAGCTGCCGGTCAATTAG 1228711 30 100.0 38 .............................. GGGTTGTTGTATTTCATCATGATAACATCCAACCCAGG 1228779 30 100.0 37 .............................. ACGAGTGTAACGTACAGTGAGGGCAAAAAAGGTATTT 1228846 30 100.0 37 .............................. TCAATTGCAAATGGTATCATGAATGCTGTGAAAAAGA 1228913 30 100.0 36 .............................. TCGTTCACATTTTTATATCCCAAAATAATTTGAATG 1228979 30 100.0 36 .............................. CTATGAAGTAGCATTCATCCCCGTCTAGTTTGTAGG 1229045 30 100.0 37 .............................. CTGATTCTAATTCTGCTGCTGCGGCTTCGGATGCTGA 1229112 30 100.0 36 .............................. GCTCCAGATATTCCTGTTTTCGCCTCGATAAGCTTA 1229178 30 100.0 37 .............................. TTTCTTACCAGCCGCCACGTATACAGCAGCTGATATT 1229245 30 100.0 37 .............................. CCAGATGCATCCTCTAAATGTGCAATAACATCCGCAC 1229312 30 100.0 36 .............................. CCAAGTATTGGGCGGGGTTTAAAAGGGATGTTCCTT 1229378 30 100.0 37 .............................. AGAGTTCCAATGTCCTCCTCTTCTTCATCGACTAAGT 1229445 30 100.0 38 .............................. TTGATAATGCTTTCCTACCCATAAGTCCAAATGGTGGA 1229513 30 100.0 37 .............................. ATTTTCTTTCATTCCCGAACTCATCAACTAATTCATC 1229580 30 100.0 36 .............................. GTATATTTGACAAGGCTCCCCTGTACCAATCCACGA 1229646 30 100.0 37 .............................. TGGGTTAAAGCACGGGTAAGGAACGAACTCAGGGCCA 1229713 30 100.0 35 .............................. ATTTTCTTTCATTCCCGAACTCATCAACTAATTCA 1229778 30 100.0 36 .............................. TCATGTACATCAGATCCTCCGAGATGTATACCGGAC 1229844 30 100.0 37 .............................. CTGCCTAAAATGGCTGCTGGGGAGTGGATTCTTGTAG 1229911 30 100.0 36 .............................. TAAAAAAACGGAGAGGTGATTGAAATGCTAAAAAAA 1229977 30 100.0 36 .............................. TTTAGGTCAAATATTGAATCAGAAATATGCAATAGA 1230043 30 100.0 37 .............................. TGGGAACAGCATACTAAAATTCCACTTCGACGACCCA 1230110 30 100.0 37 .............................. TCCAGTTGAAGGTGATGGCCCAAAGACCAAAAGCAAT 1230177 30 100.0 36 .............................. CATCTTACTACCCGAAACGATGGAACTTTCATTAAA 1230243 30 100.0 38 .............................. TCTACTTCGGTGAAGAAGTATTCAACACGTTGATCAAC 1230311 30 100.0 37 .............................. TGTGAAAGTGGAAATATGGGCCAGGGACCACTCAAAC 1230378 30 100.0 36 .............................. CAGTAATAGCCACGGAGCAGAGGGGATATGTTACGG 1230444 30 100.0 37 .............................. GGATACCAACCATAAGCTCTGATTATTGGTGTTCCTG 1230511 30 100.0 37 .............................. CTGTCATTGAACCAATTAACCGGCCCGCTTCTGGCTC 1230578 30 100.0 36 .............................. AAATAATTAAAAAGGCATACGGAAACCGGTTAGGAT 1230644 30 100.0 37 .............................. ATGGGAGGGTTTGGGTAATAAAAAATAGATTTGTTAA 1230711 30 100.0 38 .............................. TAAATGAAATTTGTTTCGGAACAGTTGGGTGTTTATGA 1230779 30 100.0 36 .............................. ATGGAAAAATTGACACAACTCACCAGACAACTTTGG 1230845 30 100.0 37 .............................. TATAATTTTCTCTATTTTTCAGGATCCTAAAAAAAAC 1230912 30 100.0 37 .............................. TTGCCTCCCTCATTGTATTTATTGAGCTTTCAACATC 1230979 30 100.0 37 .............................. TTTCTAATGCAGGTTTAATATTGGAAGAATCAACTAT 1231046 30 100.0 38 .............................. AACTATGGAATACTGTACCCATACACACTTAATTTAGA 1231114 30 100.0 37 .............................. AACCCACCTCAGACAAGCCGGCATTGAGGATGTTTTT 1231181 30 100.0 37 .............................. CCCATCAGGATACAGTGCAAGTAACAGCCGTAAAATT 1231248 30 100.0 37 .............................. AAGTAATCAGTGGAGGTGTGTAAGATGGATGTATTAA 1231315 30 100.0 37 .............................. AGTGTGTAATGAGATGGCTCTGCCAGGATGGGTACTT 1231382 30 100.0 37 .............................. AGTTCCTTGTATTGTCTTTTCAAGTCCATTAGTTCTT 1231449 30 100.0 35 .............................. GGGAATGAATTTGACGAAACAACAGAATCAGCAGA 1231514 30 100.0 37 .............................. TAAGGTATAATTAAAGGTATAAATTAAGGTATAAAAG 1231581 30 100.0 37 .............................. CTTTTTTCATACTCACTCTTTCTCCAGGGTGTTGTGT 1231648 30 100.0 36 .............................. TGCCATGGAATTGAAGAAAATACCTCGCTCTCATGA 1231714 30 100.0 36 .............................. GAACTTGCACACCAAGTATTCAGGAACAATTCAATA 1231780 30 100.0 38 .............................. GGCCAGGCCAAGGCACAGGGCGGCAGTCTTTCCCAGAG 1231848 30 100.0 37 .............................. TACATAGACACAAGCGATGACGGGACATCATGGAGGC 1231915 30 100.0 37 .............................. GGAATATTCTTTGTTGATGGTGTGCTCCAGATAGGAG 1231982 30 100.0 36 .............................. TTGAATGTTTTACAGCCATTAGCAGACAGGTTTATT 1232048 30 100.0 36 .............................. TAAATATTCATACATTAAATGTTGCTTTGTATGAGC 1232114 30 100.0 37 .............................. AACGCATCCATGGAGTAGTACAGTACCTTATATAAAA 1232181 30 100.0 37 .............................. CAAATGTCATAATCAGTATAAAAACAATCAGATGGTG 1232248 30 100.0 36 .............................. GAACAATCCTTTGGATTAAATTATACAAAATGAACC 1232314 30 100.0 37 .............................. TCGATGTTTCCAAGAATTATTAAAAAATCTTTAAAAC 1232381 30 100.0 36 .............................. CCAGGAAGGGGATGAAGACCGGACAGGTATTAGCAA 1232447 30 100.0 37 .............................. TTTTTTTTGGTGATTTAGAATGTCTGAAAAAGATTGG 1232514 30 100.0 38 .............................. GTTGCTCTGCTCCGTGCAGCTAATATACCTGCCAGGTA 1232582 30 100.0 36 .............................. TCTCCCTCGCCGTCCCGGGGAGGTAGCTAGTCCCTA 1232648 30 100.0 37 .............................. AGGATGGAACTATCTTTGAAATATGTGTATTGAGAGG 1232715 30 100.0 36 .............................. TCAGCAATGAGGAACATTTAAAGATGGTCCGGGAAC 1232781 30 100.0 36 .............................. ATGAGTGCTACTTCTACATTCACCGCAGGGTTAACA 1232847 30 100.0 36 .............................. CTATTACAATACATACACGAACACGACCCCACAAGC 1232913 30 100.0 37 .............................. TTCTTTTGCATGGTTGAAAAGAAGTGGTACTGTCCAA 1232980 30 100.0 36 .............................. ATGTGAACCTTTTACTTGGTTTATTCAGGTCGAAAG 1233046 30 100.0 36 .............................. CTGGAAGTGCCAGGTATTGGGCTGATAAACAACCAG 1233112 30 100.0 36 .............................. CTTTTCAGTGTAATCTGCTATTAACAGGGCTTTGAA 1233178 30 100.0 36 .............................. ATATATCCCTATTGAATTATAACAAACTTGAAAATG 1233244 30 100.0 37 .............................. TCACATATTCCCTGTTATCTAAAAGGTTTATCATCAC 1233311 30 100.0 39 .............................. TTAGTGTTTTAAGGGTTGATAGTATTCCGGAGTTATGTA 1233380 30 100.0 38 .............................. GATGAATGATGTTTGTCCTATCTGCCGGGAAAAAGTAT 1233448 30 100.0 36 .............................. TCGACGAGGCGTGGATAAACAGTGATGATGGGAAGA 1233514 30 100.0 37 .............................. CATTTTTTGAGTATATAAGCATTCCTAAATAGTGTCA 1233581 30 100.0 37 .............................. GTAAAATCAAAAACCCAAAGATATTCATCTACATGGG 1233648 30 100.0 36 .............................. TTTTTGAGGGGAACTATTGTTCAAACTTGAAAACTA 1233714 30 96.7 33 .......................A...... ATGTCCTACTGTTGAAAAATAAGTCATTAAAAA 1233777 29 73.3 0 .....-....TT...T......T..T.T.G | ========== ====== ====== ====== ============================== ======================================= ================== 121 30 99.8 37 GCTTTAAAATAGACTCAATAGTCTGGAAAT # Left flank : GAAACAACTATTAAGCATCCTGAGATTAAACGAAAAGTTTCCTATAAATACCTCATGAGATTGGAGTGTTACAAATTAATAAAACATGTGCTCGGCGATAAAGAGTACAGGAGCTTCAGGATGTGGTGGTAAGTGTACTTGTTAATAGTTTATGATGTAGATGTTAATAGGGTGAATAAAGTAAATAAATTCCTGAAGATGTACCTTCACTGGAGGCAGAATTCAGTTTTTGAGGGTGAAATCTCAATATCTCAATTCAAAAAATTGAAATCTGGTCTCAAAGACATTGCAAATGAAGATAAAGATTCTATTTTGATCTATAATCTTAAAGATCGCAAAAATTTCAAGTTAGAAGTTATTGGGATTGAAAAAAATCCCATCGAACTGATTCTCTAGTCCGCCTTTATAAGTAAACTACATTATTGATGGTGGACAAATACACCCCTATTATTGGAGAACTTTGCACCATTTATTGGTAAAATAACCCAAAAATCGACGCG # Right flank : GCTTCTGATTTCATTAAATTGCTGGATGATTTTTATATGATTATTTTAGTAATATTTACATTCTTCGCTGTTTAGTACGATTAAATTCCATTCTATTTAATCCAAGGAATCATAATAAAATACAAATACTTTAATAAATAATATTAAATGGGTGGTTTTATTGTTTCAATCAGAAATTTCAGAAGATTTTATGACAGTTATACCCTTGGAAATTAGAGAAAAATTCAATTTACAACCTGGAAATATCATGAAATGGACAATAGTAGATAATGCAGTTAAAGTTTCTTTTCATAGAGTAATATATTTAAGTGATATGATTGCCAGTAAAAACAAAGGTGATGATTAAATCTTAATCTAGGTTAAAACATACCCGATGATTTGATTTTTCAATGAAAAGCAGGAAGAGAGCGGACTAAGTTATTTTTACGGTAACTAAGTGGTAGTAGACGTCCTAACTCTGCAATTTTATTATTATCTTATGTAGAAACTCCAGTTAGGGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAAAATAGACTCAATAGTCTGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //