Array 1 8023-6856 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JSVG01000005.1 Actinobacillus pleuropneumoniae strain 460 contig_chr00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      8022	    28	 100.0	    32	............................	AGCATAAAAGCGGTAAAGCTCGCCTTTTGCAC	
      7962	    28	 100.0	    32	............................	AGCTAACCCGTGATATTGCAACGTTTACGTTG	
      7902	    28	 100.0	    32	............................	GAATTAAGCACAGAAGCACCTACGAACGACTT	
      7842	    28	 100.0	    32	............................	GATTGACAGCGACTGGAAACCAGCAGGCGCAA	
      7782	    28	 100.0	    32	............................	TGTTTTAGCTGCTCAGCAATCGTCTTTTTCAT	
      7722	    28	 100.0	    32	............................	AGACTTCTCAAGTAAAATGACTTTTTCAGCAA	
      7662	    28	 100.0	    32	............................	TTTGAGAAAAAGGAGAAAATGAAATCTCAAGC	
      7602	    28	 100.0	    32	............................	TACAATTTTACGCACACGCTTAACAATACTTT	
      7542	    28	 100.0	    32	............................	TGCCACATTTAACCGCTCTTGCGTGTAGATTT	
      7482	    28	 100.0	    32	............................	AAATTGTGCTTATCTTTAACTTCACCGGTTTC	
      7422	    28	 100.0	    32	............................	TACGCCTGAACCCTGTCCTTTCCCATTACCGT	
      7362	    28	  96.4	    32	...................A........	TTATGCTGATAAAATGATTCTTAAAGAAATAA	
      7302	    28	 100.0	    32	............................	CTACGGGTTGGCTACGCCAAACCTTGACAATC	
      7242	    28	 100.0	    32	............................	ATATCCACTAATAAAAGTATGGCTTCGCTTTC	
      7182	    28	 100.0	    32	............................	TTTTTAAAGGCTTCTAAAATCACTGAAGAAAC	
      7122	    28	 100.0	    32	............................	ACACCAAAACTATGCCGGTAATCTTTATTTAA	
      7062	    28	  96.4	    32	........................T...	ATTCGCCCCGACGATAAATTTCTAACTGCTCC	
      7002	    28	 100.0	    32	............................	AATGTTGAAAACACTCGGTTGGTGGGGGAAAA	
      6942	    28	 100.0	    32	............................	TCTAGTAAAAGTCCAAGCTGATGACTGACTGC	
      6882	    27	  89.3	     0	.....................C-.C...	|                               	
==========	======	======	======	============================	================================	==================
        20	    28	  99.1	    32	CTTCACTGCCGTATAGGCAGCTTAGAAA	                                	       

# Left flank :   TAAAAGTGCAATTAACTGCAGAGGGCTTACAAGACTATGCTCTTATTACATCGGTAACCCCTATTCCGGAAGAGATAGCCGAGCATCGCCGTTACCAAAGAGTGCATAGAAAAGGTCAAAGTGCTATTCGCCGTACCGAGAAATTCTTAGTTCAACAAGGAAAATGGACTGAAGAAATTCGCCAAGAGATGTTAATACATCAGCAGAATCAAAAAGTATTTCCGTACGTAAAACTCAAGAGTGGTAGCACTAAACAGCATTTTGTATTAGCGATACGACAGCTTCGTTTAGCAGAGCCTGTTTCCGGCCTATTTAACGCATATGGATTAAGCAAAATAGCAACCGTCCCACATTTCTAACCTCTTTTATAACCTTTTTTTCAAGAGAATTTATTTTTCCTTTAGAAACAAAGGGTTATAAAAACCGCTCAAAAAAGGGATTTTTTGATTAAAAGCTCTTTAACAACTTGGTATATCTGACATTCTAAAGTAAAATAACGA
# Right flank :  TCAACTGTATTCCATAAATAACATCGGAGAAAATAATATGAAAAAAACACCTTATATTCCGTCTTCGGATTTAAAGACGATTTTACATTCTAAGCGGGCGAATATTTATTACTTAGAACACTGCCGAATATTATTAAACGGCGGGCGTGTAGAATATGTTACCGATAAAGGCAATGAATCTCTCTATTGGAATATTCCTATTGCCAATACTATCTGTTTACTATTGGGAAGTGGTACTTCAATAACTCAAGCGGCAATGCGAGAACTGTCAAAAGCAGGGGTTATGGTCGGTTTCTGTAGTGGAGGCGGTACGCCGCTATTTAATGGGACGGAAGCAGAGATCGGTTGTGATTTTTTTAGTCCTCAAAGTGAATATCGTCCGGTCGAATATCTACAACAATGGTGTCGATTTTGGTTTGATGATAACAAGCGGTTAAATTCGGCAAAAACTTTACAATTGGCACGGTTACAATTACTACTTCGAACTTGGAATAAGTTTG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACTGCCGTATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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