Array 1 9846-10591 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXRD010000006.1 Prevotella salivae strain SCHI0034.S.11 Contig_6_pilon, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 9846 30 100.0 34 .............................. ATCGAGACGAGGAGTATTATACTTATCTTTATTA 9910 30 100.0 34 .............................. CACTTTAAAAAGTATTCTGATAAGATTGAAGATG 9974 30 100.0 35 .............................. TAATTCTACTTATTATTATTTGTTTTGCTCCCATT 10039 30 100.0 36 .............................. AGACAAATAATCGTTAGAATAGCCGTTCTTTGTCAA 10105 30 100.0 35 .............................. TAGCGTTTAGCACAAATGAACGAAGTGGTTAAATG 10170 30 100.0 35 .............................. ACAAAAGACTTAATAGTCTGCGATACATCATCAAT 10235 30 100.0 37 .............................. GTGTATCAAATGTTTATGCAACCAAATGATCACGTGT 10302 30 100.0 35 .............................. CTTGTAAAAACGTGGGCGGTTCTGATCCTTGTCCA 10367 30 96.7 35 ..........G................... CTTGTAAAAACGTGGGCGGTTCTGATCCTTGTCCA 10432 30 100.0 34 .............................. AACATTGTTATTCCGATTCGCTTTATCGGATATG 10496 30 86.7 36 ........C........T.......A...C CATGAACACACAAACGAGTAAGTGCACTGCAACACG 10562 30 73.3 0 A.......C........T.AT.C..A..C. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 96.4 35 GTTATAATTGAACCTTAGTGGAATTGAAAT # Left flank : TTTAAGATGTATTGGTAATTATTATGTATGTTATTTTGATTTATGATGTAGCAGAGAAGCGAGTTGGTAAAATGCTGAAATTATGTCGACAATATCTTTGTTGGATACAGAATTCGGTATTTGAAGGTGAACTGTCAGAAGTTAAACTTCGAGAGTTACAGTATAAAATACGTAGCTTAATAGATAAAAAAGAAGATAGTGTGATAATATTCTCCAATAAAATGAGTTATCACATGAGTAAGGATATTCTTGGTAGGGAGAGAATGACAACAGATAACTTTCTATAAAGTTGTCGATGTCTAAGAAATAAGACATATTTTCTTTTCCCATAGATACTAAAATTGCTCTTTGACTTTTTGAAATACCCAGTAGAACAGGAAATATCGGTGCTCTACTAAAAATATATCATTAGGTATCGACATTTTCTCAATGATTTTTTTTATCTTTGTATCGCTGAAAACATCAGTATTTATCAGCCCTTTCTCTTTTTAAAGGAGTGG # Right flank : TATCTTCATACTTAACTATAATTGCAGCATGAGTAAGAAAAAGGATGGCGAAAATGATTGGGCATGAAGTCTTCATACTTAGCTATAATTGCAGCATGAGTATATTTATATTGCACATTCTTTTGGAAGGTTTTTCTGCGCGCCCCGCCTTTTTTCTCAATTACTTTTACATAGAAAAAAGTGGTAGTTCCTATGGTTTAATAAAGAAAGAAGAATTTAGAGTGTCGGTTATTTACGATATACTGTGCGATGTTCCTATGGTTTATTAATGGAAAAGGAGAGGATATAACGACTTTGTTGTTTTGAAAGGATGTTGAGAGAAGAGTCATTTTACGCGATTTTTAGTTCTTAATTGCGGACTGTTTTCATAGGAAAAGGCGAGTAATTTGCATCAAGTGATTAGCTGTTATACATCCCCCTGATTAACAGTCAGGGGCACGTTCTGTTGATAAATATGAATCATGAGTCACTCATTCTCAACTACCTGTTGAATCGTTGTG # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATTGAACCTTAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //