Array 1 1242100-1240851 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269666.1 Escherichia coli strain 157-1949 aervm-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1242099 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 1242038 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 1241977 29 100.0 32 ............................. GACACGGATAACAGCTACCTGCAAAATTTAAT 1241916 29 100.0 32 ............................. TTCTCCAATCAGCAGTGCCCATCTGATATGCA 1241855 29 100.0 32 ............................. TCAGGGGAATTGCGATATTCAGGCAGCGTAAC 1241794 29 100.0 32 ............................. ATCGCTGGTCTGCGAAAACGCGCGCCCGAAGA 1241733 29 100.0 32 ............................. ACGAGGTACAGTGGTGCAAAAACAAATTATAG 1241672 29 100.0 32 ............................. TTACCGAGCGTCACGAAACAGACAACACCAGG 1241611 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 1241550 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 1241489 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 1241428 29 100.0 32 ............................. GCAAACAGCTAACCACCGCCGGGGCGGTTTCC 1241367 29 100.0 32 ............................. CGATGATGTAATAATTAGAGCAGAATCCAGTT 1241306 29 100.0 32 ............................. CAAAATTTAAAATCATTTAAGCTTGTAAAACC 1241245 29 100.0 32 ............................. GGTACACGGATATTCTGTCTAAAAGTTAACTA 1241184 29 100.0 32 ............................. ACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 1241123 29 100.0 32 ............................. AGGTTGACGTTGATTTTGTTCGTTATGTTGCC 1241062 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 1241001 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 1240940 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 1240879 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 21 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1269112-1267802 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269666.1 Escherichia coli strain 157-1949 aervm-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1269111 29 100.0 32 ............................. CCGATAAAATGCAAAAAACGCGGCGTTTTTTG 1269050 29 100.0 32 ............................. AGGCATCGCATGTCGCCATTCCGATCGGGGAC 1268989 29 100.0 32 ............................. GGGGTATGAGGGCGCGATCGTGGTACAGGAGG 1268928 29 100.0 32 ............................. CGTAGCGCCGCAGAGCATTTACGCGAGTTATT 1268867 29 100.0 32 ............................. GAGCAACAAAACAATGAATCCAACGGATTGCC 1268806 29 100.0 32 ............................. AACAAGCTCGCCCGGCCCGTCCTCATCAAGGG 1268745 29 100.0 32 ............................. CCACTGCACTGACTCTCGTGCGTACGCTGCGG 1268684 29 100.0 32 ............................. GCTGGCAACTGAATGCCCGCCGTATTGCCTTT 1268623 29 100.0 32 ............................. CAAAGGCCCGCCAATGCGGGCCGATTTATCCC 1268562 29 100.0 32 ............................. CCGGACGAGAAATTCACGTTCCTGCATTTCAT 1268501 29 100.0 32 ............................. CCCTCCAGTACTGTGATGCGATCTTTAAGTCC 1268440 29 100.0 32 ............................. ACTGGTTCTGTAACCCAAATTTGGGATCATTC 1268379 29 100.0 32 ............................. ACGAAACGCAGTACGGTTTTGTCAGTTAACAC 1268318 29 100.0 32 ............................. AACTCTCACCGGAGCAGAAAAAAAGAAACCAG 1268257 29 100.0 32 ............................. GCGGACGGCAAAACAATCGGGAGTCTGGACAA 1268196 29 100.0 32 ............................. ACTATCGGCGCTGTTCAGTTGGGACAGAAACA 1268135 29 100.0 32 ............................. TTATCGCACCGTGTTAAACCGGCAGAAAAACA 1268074 29 100.0 32 ............................. CGTGCCTTCGACTTTGCGGATCACGTCGTCTT 1268013 29 100.0 32 ............................. ACGGGGACGAATCACAGCAGCGTTATCGTGAT 1267952 29 100.0 32 ............................. AAACCGGACGAGGGCGCGCTAAAACGTGATTA 1267891 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 1267830 29 93.1 0 .C..........................A | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.7 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //