Array 1 591282-592571 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082874.1 Campylobacter coli strain FDAARGOS_1466 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 591282 36 94.4 30 .GG................................. TGGGAAAAATCAGATCAATTTATGATAGAT 591348 36 100.0 30 .................................... CTAAAGTTAGAAATTGCATCTATTAACCAT 591414 36 100.0 30 .................................... TATACTCTAAAGGTTCTCCTTCCCACACGT 591480 36 100.0 30 .................................... TTTTTAAATTTTATACTCTCATCTATTATT 591546 36 100.0 30 .................................... AAATATGACAGCTAATATTGCCTTTAATAC 591612 36 100.0 30 .................................... TTTATTGTGAGAAAGGAAAGTATAAAAGTT 591678 36 100.0 30 .................................... TCAATAAAAAGATACATTATATACTGGTTT 591744 36 100.0 30 .................................... CTTAGGACTTTTTATAAAAAAGCCTAGCAT 591810 36 100.0 30 .................................... TTTTGTTGAGTGGGTTATGAGCCAAAATAA 591876 36 100.0 30 .................................... TTAGCAACTTATAATAACTCTAATGTTATT 591942 36 100.0 30 .................................... GTTTCAACTTGACTTGCACCACATAAATAG 592008 36 100.0 30 .................................... AATATAGATTTAAAAGAAAAATTAAAAGTA 592074 36 100.0 30 .................................... ACTGCTATAAGAGGAGCTACTGGTCAAGAA 592140 36 100.0 30 .................................... TTTTAATCTTTCGCCATAGCTTTCTAAATC 592206 36 100.0 30 .................................... TGGCTTAAAAAGTGGCAATGTAGGATATAC 592272 36 100.0 30 .................................... GCAAGAGACCAAACCCATAAGGCAGTAAGT 592338 36 100.0 30 .................................... AGAAACTATATTAGCAGGTATAAATAATCT 592404 36 100.0 30 .................................... ATTATTCTGAATGGATAAAAAATCGTATAA 592470 36 100.0 30 .................................... AACTCTTATGCTAGAGAATAAACAACAAAA 592536 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : GCCGACATAAAACCAGGTAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCAGCCATGGTGATGTTTAATCTTTATGCAAGAGAGATTTTAAACTCTTGGTTACTTCAACCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGCAATATAGAGTTTAAAAATGGACGCATTTTAGCCAATCTTGAAGGCAAAAAAGAAGGCTCTAGTGCGATCATAAATAATCTTAACAATAAAGCTGCTCTTATGGTGGTGCCAAAAGAATGTGAAATGTTAGAAAATGAAAGTTTAGTAGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTA # Right flank : TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTGATGAAAAATAGCAAAAATTATGCTATAATCTCAATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTAGTTGTATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTAGTTTCGTTATTAACTTTTTCATTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGTAGCATAAAATAACCCAATTTTATAAGATTGTTTCTAAATTTACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //