Array 1 8873-7054 **** Predicted by CRISPRDetect 2.4 *** >NZ_NERQ01000015.1 Aliarcobacter cryaerophilus strain 938 NODE_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8872 36 100.0 30 .................................... TAAAGGCTTCTTTAAATGTTGTGTAGCCGT 8806 36 100.0 30 .................................... TTTTTTAATCTTTTCTAGTTGAGTTTTTTG 8740 36 100.0 30 .................................... TATCGCTATCAATATAAAAGAGAATAATAT 8674 36 100.0 30 .................................... GTTTGATGATATTTTGATGGTGCTGTAATA 8608 36 100.0 30 .................................... TGAACATTAAAATGTACATTCATTAAGAAA 8542 36 100.0 30 .................................... TATCTCATATCAATCATTTAGCTACCTAAA 8476 36 100.0 30 .................................... ATAACTTACAACTCTCATAATTAGCTTTGT 8410 36 100.0 30 .................................... GCAACTCCAAAAGAACCAAAAGATAGTAAA 8344 36 100.0 30 .................................... AGTTGTGACTTAGCTAAACTACCCTCTAAA 8278 36 100.0 30 .................................... TTTGCCTAGTGTTAAATCTTTAAAGTTTTT 8212 36 100.0 30 .................................... TTAATCATAGTTTCATAAGTTACCCAACTA 8146 36 100.0 30 .................................... ATGATGGAGGAGATACTGCAAAATGGAGAT 8080 36 100.0 30 .................................... ATCTTTTCTAGGCTCTTTTTTAATGACTCA 8014 36 100.0 30 .................................... TAGCTTCCGTTTGAGTCTTTTGCTCTATTT 7948 36 100.0 30 .................................... AACCATCACCAGTCCAACTTGTAACAGTTT 7882 36 100.0 30 .................................... TATTTGCTGTAAATATCCAACACGCTGAAA 7816 36 100.0 30 .................................... AAAAATTATGTATTAGAAGTAAAAAATAAA 7750 36 100.0 30 .................................... TAAGCCAAATAATATAACTATGAATTTAAT 7684 36 100.0 30 .................................... AAAATATCCACACTCATCTATAAAGCTAAC 7618 36 100.0 30 .................................... ACAATATTGTAAATCTGTTCAGCATCAAAG 7552 36 100.0 30 .................................... TGGACTAGCTCCAACAGTTATTGATCTAAT 7486 36 100.0 30 .................................... CTGAGAAAGATAATTTAAATTCTACAAAAG 7420 36 100.0 30 .................................... TAAGATTGATACTATATCCTCTAAGCTTGT 7354 36 100.0 30 .................................... AAATCTGCCTAAAGTATATCCCCCTCCAAA 7288 36 97.2 30 .....................T.............. AATATTAAATCAGCACTTGTCCAAGAAGTA 7222 36 100.0 30 .................................... AGAGTTTGTAGGTTCACCTCTTACACAGTC 7156 36 100.0 30 .................................... ATATTAGTTTCTGGATTAACACCTGTACTT 7090 36 97.2 0 .................................G.. | G [7060] ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.8 30 ATTGTATCGTATTTTGCTTTAGAGTAGGGGTCTAAT # Left flank : ATAGAAGTCTCAATATGGATTTAAAGTTTATGTATGTTTTAGTAATGTTTGATTTACCAACACTATCAAAAAAAGATATAAAACGATATACAAAATTTAGAAATAGTTTGCTAAAAGATGGTTTTACTATGTTTCAATACAGTTGCTATTTAAGAATTTGTAAAAGTGCATACTCAGCAAAAGCTCATATAGATTTTGTAACAAAAAAGATACCAAAAAATGGAGAAGTAAGAATTTTAAAACTTACAAATAATATTTACAATAGCATGGAGATTATTAAAAAAGGAAATAAAGATAAAGGTACAAATGAAGAAAAACTAATGACTCAAACAGTCATAGAATTTTAAAAAAGTAGGTATAGAAAACAAGTTCCTATACCAAAGTTTTCTTCTACATATTGTAGAATTGTTAAACCACCTACCCCAAAGCAAAACACGATTTAGCATTTTATTTAGATTATACTTAAATCTAAATAAAATTTTTAAACTAATTAAAACCCT # Right flank : TAAAGTGTTCATGGTTCATGGGACTAAAAGTCCAATTTCTAAAAATAATGCAAATCCTATTATAAAGTAAATTAAAATGTATGAAATTAAAGTTTTGTTTTCAATAATTAAAAAATATGATAAAATCTACACAATAATATAACAAAAGTTATTTTATAAAAATATACAAATATGCTTATTGTAGCTATTAATTAAAAATAAAGAAGAAAAATGAATATAATAAAAAAACTATTTACGGATTTAGAAAGTTTATTAAACTTATTGGTAGATTTTGATTATAGTAAACTAATATTATTAGCAATAATCTTATCAATAATATATTTAATTAACAATATTATCTTAAATAAATACTATAAACCAGGCATAAATAAAACTAAAATAGAGTTAAAAAAAATCAATTTAGAAGCAGCTTTATATAAAAAAAGGAAATATTTATTAAAAACATATTTGATATTATTTATAATCATCTCTTTTTTTGTTATCTCAAAAAATAATTTATC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTATCGTATTTTGCTTTAGAGTAGGGGTCTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 55685-55357 **** Predicted by CRISPRDetect 2.4 *** >NZ_NERQ01000010.1 Aliarcobacter cryaerophilus strain 938 NODE_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 55684 37 100.0 36 ..................................... ACTTATTTAGATTTCCTAATAAAAAATTTGATACAA 55611 37 100.0 37 ..................................... AATTTATACATCTCTAACGATGTTGCTAAAGGCAATA 55537 37 100.0 36 ..................................... TTCGTTGATTTTAATAAAGAAATCTTTTTCATCATA 55464 37 100.0 34 ..................................... ACTATTATATACAATAATGAAACCTGAGCCATTA 55393 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 100.0 36 ATTCAATACATATGACCCGATTTAAGGGGATTAAGAC # Left flank : CCTAAGATTTTATCATCTATGCGAGAATTGTGTTCCAAAGTCTTTTGAACTTTGTAATAGAGAAGAAACATTTGAAAAAAGAGAGTATTTTATATAAAAACGATTTGCGAACTTTTTTTAGTCAAATTTAGGGCTTTTTGGATAAAATTTGATTTTAAAAGTTAGCAAAACTACCTTTTGCTAAAAATATAAAATTAGGTTTGCGAACTTTTATTTTAATTTAAGATTTACATATCGATTTTACGGTATTTATGAAACTTAAGTTAAGCTAAAAGTTAGAGAATCTCAATTATTTAGTTTTTTATAAAATGATTTGCGAACTTTTTTAAATAAAAGAAGTCCATAAAATCGAGATTTTTAAAAATTTAATGTCAAAATACTAGAGTTGCATTTTGAAAAATGGTATACATTTGCGAACTTTTTATATAAAATACTATAAAATCGTATTTTTAAGTCGATTATGTGTAAAATACAAATTACGAAAAGCCTTTTTTATGGCT # Right flank : CTGTAAGTTGCTCCATTGTTAGATATTTGTTGAAATAGTTTATTCAATACATATGACCCGATTTTTTGCCTTTGGCAAATTCAGTTATCACTAAAAATAACGAAACCGCTATCGCTTGTTTCTATTTTTAGGTTTCAGAAGAAGGGGATTAAGACACATTTTCAATAACTTCACATTGTTTTGAATTAAAATTCAATACATATGACCCGATTTTTTGCCTTTGGTAAATTCAGTTATCACTAAAAATAACGAAACCGCTATCGCTTGTTTCTATTTTTAGGTTTCAGAAGAAGGGGATTAAGACTATCTTTCTTTTCTTGAAGTACAAAAATTCTTTCCATATTCAATACATATGACCCGATTTTTTGCCTTTGGCAAATTCAGTTGTCACTAAAAATAACGAAACCGCTAAAGCTTGTTTCTATTTTTAGGACTCAGAAGAAGGGGATTAAGACCATATTGTGTCTTTTTGCTATTCTAGCCCATCTTGATTCAATACA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAATACATATGACCCGATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //