Array 1 310196-308848 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP039853.1 Salinimonas iocasae strain KX18D6 plasmid plas12, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 310195 28 100.0 32 ............................ TATATCCGCCCAGTTCATTGAAATTCCCCTGT 310135 28 100.0 32 ............................ TGAAAGCCTTTACCGGCTCACAACAAAGATAC 310075 28 100.0 32 ............................ TTGTTCGTTAATAAACAAAGGGAGTAAAAAAA 310015 28 100.0 32 ............................ TGCAGGCAATGCAAAACAAAGGGCGCACCTGA 309955 28 100.0 32 ............................ TAAAGATGCCAGCTTTGATGATATTACCCTGG 309895 28 100.0 32 ............................ TGACCGGCTCACAAAAGCAGCAGGCTGAGGAA 309835 28 100.0 32 ............................ TTACAAGCAATCATGCAACAGGTGGAAATAGC 309775 28 100.0 32 ............................ GATGAGTCTGATAATTCCATTGAAGATAGTTA 309715 28 100.0 32 ............................ TTAACGGCCTTGAGCCAGCTGACATGATTGTT 309655 28 100.0 32 ............................ GACCCGCCCGACACCAGGCGCACGGGTTTACC 309595 28 100.0 32 ............................ AGCACGTAATGGTTTAAAAGGGAGCCATCCGG 309535 28 100.0 32 ............................ ATCATCGTATTTAACGAGAATCTGACGCTCAA 309475 28 100.0 32 ............................ GTGGACGCATCCAGAACCGGCGCACCGTGTCG 309415 28 100.0 32 ............................ TATAAATTTTCGGCTGATGCGTGTAAGCCGTC 309355 28 100.0 32 ............................ TATAAAGATGGCATGAGCGAAGATGAGGTAAA 309295 28 100.0 32 ............................ TCGACGTATCCGTACCCGTTCCAGGCTGAGCG 309235 28 100.0 32 ............................ TGGTTGCACCATTCGCGCCCCACACGTAGCGC 309175 28 100.0 32 ............................ TGGTAACCATTTAACATTAACGACAAAGCCCG 309115 28 100.0 32 ............................ TGCAAGGAAAGTTGCGCGCCCTCTGCGGCTAC 309055 28 100.0 32 ............................ ACTATGGATGGTGATCGCTTTTTCTGTAGCGA 308995 28 100.0 32 ............................ GACGAAATCAAGATCCGGGGCTGGTTTGAAAA 308935 28 100.0 32 ............................ AAATCACCCGGCCCGGCACACCAACGCCCGCC 308875 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 23 28 100.0 32 CTTAACCGCCGCACAGGCGGCTTAGAAA # Left flank : CTGGAACAATTGGAGCAATTTCCCTGGCGTAAGGGGCTGGGGGATTTTACTAATGTAGTGGGTATTAATAAAACGCCGGATACCAAAGAGTATTGGTTGGTGCAGCGGATGCATGTTCAAAGTAGCCCGGACCGACTTCGCCGCCGGGCGATGAAGCGTCATAGCTTGACCTACGACCAAGCCGTTGAACGGATACCAGACAGCGCTGGAAAGCGGCTTGACCTACCTTTCATCCGAATTAAAAGCCGATCGACAAACGGCCAGCAGTTTCCTTTATTTATTAAGCAGACGCTGTTAGCGGAAGTGAAAACCTCCGCGATATTTTTTTCGAAGTACGGACTAAGCGCCACAACACCTGTACCGAAGTTTTAACCCTTTTTCTAAGTATCAACCACGAAGCCTGTACAACGGGCTTTCTCTTGTTCATTAAAAAAAGGGTCATTTGGCCAGAATCCACTCATGTTCTTTAACAATCAGTAAGATAGTGGTATTTTTTTCTA # Right flank : GGCGCCAAACGTTACATGATGCGCTTACGATAAGACGCTACAAACGCTAAGGCTGATGCTGAACGAGAGGCTGCCACCGAAAGCCTGGCAATGGCAGAATCTGTACTTCGCCATTTGCGCAGTACGTATTTTGGTATTGAAACTTAATTGTTTAAAAGTCAGTAAGGTTTTGAGGTTTATGCGCTTAACTTTTAAAATCTCACTCAGGAGTGTATACTATAACTATACGCACAAGGATTATGTTTTGATTGTTAGTTTTAAGTCATCTGTTTTACAAGAATTTTTTGAGTCTGGTGACGTTACATTACTTCCCTCAGCTTACGTTTATGAAGTTGCGGAGGTTCTCGAGTATCTGGATGCAGCGATTCAGATCACAGACTTGGAGCTATTAGGTGGTTTTACCATTTATGAGTACCAGCCAGACAACTGGTCAGTAACAGTTACCGTAAACAGCGTTGAGCCAGTTGGTAGTGTAACGTGTATGTTTATGAATAGTAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACCGCCGCACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //