Array 1 165371-163402 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACZAL010000002.1 Enterococcus faecalis strain VET-204 NODE_2_length_373699_cov_137.617, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 165370 37 100.0 29 ..................................... TTGTACACCTCTTGTTGTTCTAAATGAGT 165304 37 100.0 29 ..................................... CCTTACATGTATTTAAACCCAGAAACAAC 165238 37 97.3 29 ....................................C TTTAGCTATTACAGGAATTGCCGCAAATA 165172 37 97.3 29 ....................................C GATTCGGGATTTCATGAATACTGATTGCT 165106 37 100.0 29 ..................................... ACTAGCACACCATAAACGGCGCCTGTATA 165040 37 100.0 29 ..................................... GGGATTGTTGGGATTAGTGAAACATCTGT 164974 37 97.3 29 ....................................T GTTCTGTAAGGCTGTAGATCGGCCGGACT 164908 37 97.3 29 ....................................T GGACTTAACTTCTATAATGACCGGTTAAT 164842 37 100.0 29 ..................................... GTGACAGATGGTAAATCGTTGTTACTTGT 164776 37 100.0 29 ..................................... TTTCCTTTCGTAGTGATCACAAAATTTTC 164710 37 100.0 29 ..................................... CCAGAAATAAAAGTTGACGTAAGTATTGA 164644 37 97.3 29 ....................................T AAGGGCAAAACTGAAAACGATACAACGAT 164578 37 100.0 29 ..................................... GGGATTGTTGGGATTAGTGAAACATCTGT 164512 37 97.3 29 ....................................T GATGAAAACCGATGGTATTTACTTTCACA 164446 37 97.3 29 ....................................C ACTTGTCCAATATGAATGTGTTGTTCTAT 164380 37 97.3 29 ....................................T TAGTTATTGAACCTCAACGCACACCATTG 164314 37 97.3 29 ....................................T GTTTTAAATTCATACATAACGAAACATGT 164248 37 97.3 29 ....................................C ATCGCAATGAATAAGTCATCTACGCCGAT 164182 37 100.0 29 ..................................... AATATTTCTTGCTAAAGTCAACAGCGCGA 164116 37 97.3 29 ....................................T TAGAAAAGACGTGACAGAGCAAACAGCGC 164050 37 100.0 29 ..................................... GGTACAATTTATGGATTGTCACATGTCAT 163984 37 97.3 29 ....................................T GATGAAAACCGATGGTATTTACTTTCACA 163918 37 97.3 29 ....................................T TATGCAGAAAAATTAGAGCAGCTGAAAAA 163852 37 100.0 29 ..................................... AACAGCTTCACTAATCATATCAATCGCTT 163786 37 100.0 29 ..................................... TTTACCGCCAAACTTATACCAATGGTGAA 163720 37 97.3 29 ....................................C TCGTTAGAATGCCCTTCACAGCTGTTAAA 163654 37 94.6 29 ..................................T.T CTAATGAGCATTCATTACATATGTAGAAC 163588 35 81.1 114 ......................TT.--.CG......G ATATGATTGATGTAAAAATATCATTGATATGTATAAATATGGTTATTATATAAAAAATATAAGTAACGAATTAAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTA T [163556] 163438 37 70.3 0 A...........C...A....TT.CTT...G..T.G. | ========== ====== ====== ====== ===================================== ================================================================================================================== ================== 29 37 96.8 32 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : AGCACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAAAAAATAATTCTCCGAG # Right flank : GAGTACGATTAGTTAAATATTTAGTTTTACAGCTATGTTGTTATTATATGTGTTGAACGAAGTTATTGATTTTAAAAGTAGTTGTTCCTCCTTTTTTTATATGCTACAATTTTTCTATATTAATCATTAGTTAAATATTTAAGGAGGTGATTATAATAAGAAGGAAAGGATTTAACAAAATAAAAAAAGAAATGGAATATGTTAAAGTAGTTACGAATTTACTAATGGTATCAAAATTTTTTACGCTACAGTCCGATGAAGATTTACATACATTAACTCTGTTTGGAACATTACTTATTTAATATTTATAGACGCTTTGTAATGAATGCGCTTTCTACGAAACTGGATAATAAAAATTGGCATTTTTCAAATGCTACTTTATGTAGTTTACTTTTTTATAGTGGCTATGTATGTTCGCATTTATTTCTTTTGAATAAAAATCACTTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTT # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.23, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //