Array 1 36227-36668 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000011.1 Vulcanisaeta sp. EB80 NODE_47_length_42872_cov_15.6361_ID_1530894, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 36227 24 95.8 42 .A...................... GTCCCTCATCATATACTAAACAATTGGCCACAAGTTCAGCAT 36293 24 95.8 45 .A...................... GTTGTTTCAACTGCCTGTGGCGTTACGATGAACGACATATCACCG 36362 24 95.8 45 A....................... CCTCAACATACGGCTCAAGGGCCTTGGTCTCGACGTGTTGGAGTT 36431 24 100.0 50 ........................ CAACAACACCACAGTGGCTTATTCCATATCTGTCATGCACAATAATAATA 36505 24 100.0 44 ........................ CAATCCTCTCCCAGTACCTGTCAAGCTCGTACGCAGCCTTGATA 36573 24 100.0 48 ........................ CGTTACTGATTAAACAAATGAGTATGTCGTTGTACCTCTCACACGTTG 36645 24 83.3 0 .A...................CGT | ========== ====== ====== ====== ======================== ================================================== ================== 7 24 95.8 46 GGTGATTTCAGAGGAATATTGAAA # Left flank : CTAAACAACCTATTAATTACTAACTTAGTGATTGGCCTAAGCTCCATGTCAGGCACGCCCTCTAGCCTAACCGAGCCGTCGTAATCCTTGAACGTGATTGCCGGCAGCCCATTAACTCCCCTATAGTCCAGCCTACCAATGACTAGCCTAATCATCGGTGATTTGGGCCCAACCTTTAAAGGGACCCCACGAAACCGTGCAATAAGCAATAGTCCCAATGCACGAATTCGTGAACACCCACGTTGCGTTTTTCGTTGCCGAGGCTTTCCGTGTTAAATGCACGAATTCGCGCATTTTTCTACGCTTGACTTTTGACTAATTACCGTTGGAACAAACCGTTGATTTGGGATTGAAATTCCGTGGGAACAACAATTCAATCCCCAAAGCATACCGTGGGAACAGGCATGAACCATAAGCATTAGGAGTAGAAACACGTTCCCACGAAGCCCGAGGAACGGGGGAGAAAAACTTTAAAACCCAAAACAAAAACCAACCCAGCG # Right flank : TGAACGCAACACTTATAAGCGCGCTGGTTGATGCTGTAAACGCCACCCAAGCGGCCAGCCACCCCACACCCACGGGGCAACCCCGCCCCCTTTGTGGGGCGGGGTTCCTCATTGTATGCATTGGTTGTTTTGGTTTTTCCGTGGTTGCTTTGGTATGCATTGTTCGTGATTAACGCCGTTGTTGTTGTATGCATTGGTATACTATGGGCTTATCGATTCTTCTCGGTAACTGTGGCTTTTTAAATTGGGGACTGGTTTATTGTGGGTCGTAGGGTAATCAGCGTCAGTGAGGATGTCTATAGGAGGCTCTCCAGGTTAGCCGCCGAGAGGAACAAGACAATCAACGACCTAATCGAGGAGCTACTCAATAACTACGAGGGTGGGGTTGGTGGTAACTCGATAGTTGAGGAATTAAGCGAGGTGAAGGCAATGCTCAGGGATTGCCTAAGTAGGCTCGGCATCAAGCAGACAGCCGAGAATAAGCCCGTTGGGGCTGAGTC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:-0.03, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGATTTCAGAGGAATATTGAAA # Alternate repeat : GATGATTTCAGAGGAATATTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 9394-8909 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000014.1 Vulcanisaeta sp. EB80 NODE_53_length_40153_cov_17.6286_ID_1672784, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================== ================== 9393 25 96.0 47 ............T............ CCCTAGAGCCGGGTGTGGTTCTTATCGTGCTCCAACTACTCGGTGGT 9321 25 96.0 40 ................A........ TGGACTTAGTGAACGAGATACTCAAGGCCGAGGCTGCCTT 9256 25 100.0 47 ......................... ACAAAATACATTAATGTGAAGTGTACAAGAGGCGAGTATAGGTATAA 9184 25 96.0 50 .............C........... ACCCTGGCGTTTACCTTATCGCTGACGTTGCTTATTGTTATTTTCATACT 9109 25 100.0 46 ......................... CTCGTTCTTTTTCGCCATGCTTTTTGCCGACCTGCCCCTCAGCACC 9038 25 100.0 45 ......................... GGGGTACCTTATACATGGGGTTAGAAATGGCAAACCAAACAAACC 8968 25 100.0 9 ......................... CGGGTTGTG Deletion [8935] 8934 25 72.0 0 ....T.T....C..T...A..T..T | A [8924] ========== ====== ====== ====== ========================= ================================================== ================== 8 25 95.0 41 GCTTCAATTCTTCTGTTTTAGATTC # Left flank : CTCACCGAACCTACCAGCCCTAACAATGCTGTGGTACCTATCCTCAACCCTAACCCTCAACTCGTTGTTTTCAACACCGATGTTCGGATAAATCGCTCCTTTCGCGAACTCATTGGCATCAGCCGTGAAAACCCCCGCAGGCAACCCCCGCCTAAATAACCTCACCTTCTCCCTAAGCTTCTCAACCACACCTCCAGAATCAACGCCAGAACCACCCATTCAATACGGCATCGACCAATTACATATAAGCATTGCCCAACGATCTACCCAACATAGCCGCGAACAACCCCAGACACCACACGATGGCTCAAAAAGCCATCCTAAATCATCGAAAAAGCCCCGAAACTATAACCACGTTGGCAACACTCGACGTAACCCGCCTAAATGCGTTACTCACCAGGTTGTCCATGGACATGCTAATCCACGCAGGGGAATCAATAGTGAGGAGGGTGGGCAACGAGGAACTCACGAAAATCAAGCCACGCCAGGAAGCCAATCCT # Right flank : CCCTACCCCGTTCACGGGTTCTCGCCAGAGGGTTTATCCACCCCCATGCTCACGACTCGTGAAGTCTCTGACGATCTGGCGATTACGACACACGTAAGTCTCTGACGGTCAATTCAATTCCTCAATGTCGTGGGGGCTCTTACGGCAGGGTAGAACGTTTATCACTACGCTAGGCCCTTGGTCGAGGGCTCCAGCTCGATTATGGCCTGCCTCCTTATTGGCCCGGTGATGACTAGGGCCTTCGTTGTTAGCCCTGCCATGTGTGGTGGTAGGGCTGTGGTTAGCCACCTGACGACCTCGTTGGTTAGGTTCAACACCTTAGCCACCTCGTTAACATGGGCATTGCCATGGTTCAAAGTAATCATTAGTTATGTTCTGGGGCGGTGTGTTTACCCGGTTATCGTTTGATTAGCCATTATTGTGCCTGGTTCCGTGTACAACGTGTTCCAGGGGTGGATGTGGATTAGGCGCAAACGGCGATGCCTACCATGCACGTAATT # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.34, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCTTCTGTTTTAGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 13685-14473 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000014.1 Vulcanisaeta sp. EB80 NODE_53_length_40153_cov_17.6286_ID_1672784, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================ ================== 13685 25 96.0 47 .A....................... CGTGAAAAAGCGCAGGGCAGGATCTGTAACGTCCATTTTCTTGATGA 13757 25 96.0 44 .A....................... ATTGATATAGCCCAGGGCAGGTCTTATGTCTGGTAGGTCTTTGA 13826 25 96.0 43 .A....................... AGTTTGCCAATATCACCAAGTGCCTCGTTTATAATATCACTAA 13894 25 100.0 41 ......................... GACACAATCGCACTCCAGTTCCTCACGTAATTGCCTTTGCT 13960 25 100.0 42 ......................... TGATGATGCCCGTGGCGGTGTTCAGTTCCTGAGTTATTTTAA 14027 25 100.0 46 ......................... CTGCACGAACTCGCGGTAGAGCTGTGAATACGTGGCTTGTTGGTTT 14098 25 100.0 42 ......................... ACATCGGTCCCACTTATGTTTGGCCTTGACTTCAGAACAAAT 14165 25 100.0 46 ......................... CCCATCATCGTCCTCGCCCAATTCATACTCCACGTAATATTCAGAG 14236 25 100.0 45 ......................... ATGTAGTCCAACGCAGACGTCTCAACAACAGTGCCAGCTATGTCG 14306 25 100.0 48 ......................... ATCAATCAAATCATCAGGTCCATAGCCACGTTCTTTGCAGTAACCTAT 14379 25 96.0 42 .G....................... CCCAAACCACGTTATCTCTGTCGATTAGAGCTTCACGCGAAA AGA [14391] 14449 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ================================================ ================== 12 25 98.7 44 GTTGATTTCAATAGAATATTGAAAG # Left flank : GGTGTTGGCATGATGCATGGCTAGCCCATGTAGCCTGATCGTTTCTCCCCCGTGAACCACCAATGTAACGATGTAGTCTCTCCCATAGATAGCCCTAACTTCCGCCTCCAACACCTCCTGCACGGCATATAGAAAGCCCGTAACAAAAACCCACCAACGACAAACCCAACCATCGATGGTTAAGGCTTCACGAGACCGTGCAATAGACAATAAGGGCAATGCACGGATTCGTGAATTCCCACGCTACGTTTTCGTTGTCGAGGCTTTTCGTATGAAATGCACGACCTCGTGCATTTTCTACACTTGATGTTTGACTATTTATCGTGGGAACAAGTCGTTGCCGTGGGAATTGAAATTCCGTGGGAACATTAATTCAATTTCCAAAGCAGACCGTGGGAACAGGCACGAACCATAAGCATTAGAAGCAGAAATATGTTCCCACGAAAACCAAACAACGGGGAGGAAAAACTTTAAAACCCCAGACAAAAACAAACGCGGCG # Right flank : GATTGTGGGTGTGTTCGTCGTAATCATCCTAGTTATTGATTTCAAGTTGGTTTCGAAAATTGAAAGTTCTAACCTCCTCACCTGTGTATCTGATGGATATTGGCAGTGTGGATGGAGGTGGTGATTTCAAAAACTTTTGATGAGTTGGTTCGTGATCTTGGACTCACTATCGAGTCACTACGTGATGATGTAAAGTCACTTAACTTAAAGACCCCTCTTTAATAACGACAACCTTAAGGCTTGGTGCATCGAGGGGTTTAGTCAATAAAACAATATAAAGTATTTAATATTAGGCACAGCTTGGTTGGGAGGGAGAAGTAATGCGGGATGATTGGGACGATGTCGTTAGACAACTCGAGGATTTGCTGAGGAAGATGGGTTGGAGCGAGGTTAGGATGTGCGAGGAGTTGTGGCGGTTCGTTGGTGTTGATGTTGATGAGTTTAGGATGCACGGGATAGAGCCGTGTGCTTGGCTTAAGGGCTTGGAGTCACTGCGTGAT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATTTCAATAGAATATTGAAAG # Alternate repeat : GATGATTTCAATAGAATATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 8900-9197 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000070.1 Vulcanisaeta sp. EB80 NODE_205_length_10828_cov_15.2706_ID_1652946, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================================ ================== 8900 25 100.0 44 ......................... GAGTGACCTCATATGTCGTCCCTCCACTCCAGATTGCAATTTTA 8969 25 100.0 43 ......................... TCTATATGCAACGCACCCTCAACTCGCACCTGTCCTGCCTCTA 9037 25 100.0 44 ......................... TTGCACCTTTTTCGCCAAATCCCCCAGCTCGCCCAAGCCCTCGC 9106 25 96.0 42 .T....................... AATCACGAAGTAGGGCACCTTATAGACGCTATCGTGCTTTAC 9173 25 92.0 0 .A........A.............. | ========== ====== ====== ====== ========================= ============================================ ================== 5 25 97.6 44 GCTGATTTCAGAGGAATATTGAAAC # Left flank : CACTAAATAACCTAATTAATTATTAATTTAGTGAGGGGCTTAAGCTCCATGTCTGGCACGCCATCTAGCCTAACCGAGCCGTCGTACTCCTTGAACGTGATTGCTGGCGGTTCATTAACTCCCCTATAGTCGAGCCTACCGATGACTAGCCTAATCATCGATCGCTAAGGCTCTTGCTTTAAAGAGTTTCACAAGACCGTGCAATGAGTTCATCACCCAATGCACGAATTCGCGAACACCCACGTTGCGTTTTCGTTGCCAGGCTTTCCGTGTGGTTTGCACGAATTCGTGCATCCTCTACACTTGACTTTTGACCATTTATCGTTGGAACAAACCGTTACCCTGAGAATTGAAATACCGTGGGAACAACAATTCAATTCCCAAAACAAACCGTGGGAACAGGCACGAACCATAGGCACTAGGAGCAGAAATATGTTCCCACGAAGCCCGAGGAACGGGGAGGAAAAACTTTAAAACCCAAAACAAAAACTAACACTGCG # Right flank : CTATGGTGTAGGCGAGCATTGTCAAACAATTACTCTCTTTACTTTCAATATTAGTATTTTATGTTTAGGTTGTTTGGTACTTATGATGTCTTCATTGCCGTTTTCGATTGAGCCTGGGTCATCATTAGTAATTTATTATCCGCACAATGGGAGGACTATCAGCACAAAGTTGCCCGCCAGTGTGAATGTATTGACCAGGAGGTATTATGACCTTGGTTCGTTGCTTTGGTTTGTTGAAGCTTGGTATTGGGAGCCTAAGTATGGGTTTATATACTTCGAGAGTGGACCTCATATACATCCGAAGGCGCCAGCCATGTATCTAGTAGTACCGCCAAGATCCACATTCGCCGCTACGGACGGTGGATCCCACATGCATTATGATAAATCTACTATGAGAAATGCTAGTCTAATATTCCTGTTCTTAATAATGCCGCTGATCTATCTATTAAGCATTATTAATATTAACGTAGTTCATATAAACACTAGCGTTGATGAATTAT # Questionable array : NO Score: 5.94 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGATTTCAGAGGAATATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 26864-26064 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000006.1 Vulcanisaeta sp. EB80 NODE_28_length_55579_cov_13.6725_ID_1556392, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ===================================================== ================== 26863 25 100.0 38 ......................... GCAGTACGCCGTGGAGAATTGGTCTAACATCAAGGGCA 26800 25 100.0 38 ......................... GCAGTACGCCGTGGAGAATTGGTCTAACATCAAGGGCA 26737 25 100.0 48 ......................... TGTCTCTTCCGTACCAAGGCGTGGTGATTATACCTGCTGACAACGGTG 26664 25 100.0 45 ......................... TGCTCAAAACCTCGTTTGCAGCATCAACATCGTCCAGGTCTAGGA 26594 25 100.0 50 ......................... AGTTTTCGTTTTCAGCAACCTCACTATTCCTAACCAGTCTTTTTGCCGTG 26519 25 100.0 43 ......................... TGGATACGGCAACTGACTGTACCTCAGTAAACCTTGTTTGCAC 26451 25 100.0 44 ......................... TAACGAAATTATCCAACCGAGTTTGTGGAATAGCCGTAGGACAA 26382 25 100.0 42 ......................... GATGTTAGGTATAAGGTGGCTTTTAAAGATGATGAAATCAAC 26315 25 100.0 48 ......................... AACAACGGACATATTATGTACCTATTGAGTGATGACTTACCGATCCCA 26242 25 100.0 51 ......................... AGATTGCCACTTGGTACTTTGCGTTGTCGTATGCATTCTTTAAGATTGAGT 26166 25 100.0 53 ......................... ACTTTGCTGAAATGCATGATGCTTACACATCATTACTATACCCTAATGCAGAG 26088 25 92.0 0 .......................TA | ========== ====== ====== ====== ========================= ===================================================== ================== 12 25 99.3 46 GAATCTCCCTAAAGGGAGTAGAAGG # Left flank : GGAGGAGAGCCCGAGTATTAGGGCCTTGTTTAGGGGTGTGGAGAGGATTGTTGAGTGGCCCTTCGTGCCCGTGATGGCGGAGTTGACGGAGGAGGAGTACAGGGTGTTGAGACTCGTGGGTGATGGCATAAACAAGGCAAAGAGGATTAAGGAGGAGTATAACGCGAGGTACTGCCAGGGCAGGAAGGAGTGTATCTCACTACCAACGATAGAGAGGGTACTCATCAAGCTGAGGAGGAAGGGGCTCGTGAATTATGAACCGACAGGCAAAGCCTACAGATGGCACTTAACACCCATGGGACAACTACTCGTAGAAAAACCGTCAGAGTCTCTACGTTATTGAGGAATTGAATTGTTCGTCAGAGTTTTTCGTGCATCGTAGTCGTGAGATCGTCAGAGGCTTTACGAGTCGTGCATCGACTAAGGGAATAAACCCTCTAACGAAGACCAACAAACGGAACCAGAAAACCTTATAAAGAAGTTTATAAATTAATGACTCA # Right flank : TGTAAACTTTAATGGTGTGTGGCGTGGTTATTGGGTTAACGAGTGCGATGCCGACTACAGCGTCAGTCGCTGCCTGTGGTGTTGGCTAGCCGTGATTTGGTTGTTTGTGTCGGGGTGTTTGTTGTGGTGTTTAGGGGTTGGTTTGTCTCGTTTGGGTGGTGGTTGTGTGTTGTTATGTACTTGCTGTGTAGTTCCTCGTGGGGCTGTTGTAGAGTTTAGCGAGTTGAGTGTAGTGCTCGTAGTGGTGGTAGGCGGTGTGGTACATGCCCATGTAAGCCGGCGTGAAGGGTGCCGTGGTTGGTCATTCACAGGCTGGGTTTTCCTCCTGTAGGGGTCGGCGTTAGTCACCATAGGTGTGGTTTTTGGTACTGTGTGTCCTGTGCTGGCTATTGTGGTGGTTGGGATTGGGTGTTTGTGGTTTGGGTTGTTTGCCAATGCTTCATGTATGCTTCTTTGCGTTTGTATGCGGCGTAGAGCAAAGCCGCGAATGCGTCTGGTGT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCCCTAAAGGGAGTAGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.60,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 37471-38265 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCWN02000006.1 Vulcanisaeta sp. EB80 NODE_28_length_55579_cov_13.6725_ID_1556392, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================= ================== 37471 25 100.0 46 ......................... ATTACCGAACGATTGTAATTGCTGTGCAAGCCATGATTCCAATTGT 37542 25 100.0 43 ......................... ATCACGAAGAACGTGAGGGGTGGTTTGTGATGGTTGGGGCCAG 37610 25 100.0 49 ......................... CAGTTACACGTTGATTGACTTGTTAATTCCAACAATGCCCTAACATAAC 37684 25 100.0 45 ......................... AGGGAGAAGCCACTAACCGTTACAACGTATGAGGGAAATGCAAAG 37754 25 100.0 44 ......................... ACGCAATACCCAAACAATTCTGATCGTACTTAGACAGGCAGTTG 37823 25 100.0 44 ......................... CGTGCGATAACAGTCCAATGCCCAGACCCACAGAAGTGCCTCCA 37892 25 100.0 48 ......................... TTGATTAGCAATTGTATTTGGGCGTCGGGTGATACAGTGCTTAATGTG 37965 25 100.0 47 ......................... ACAACCACTTTTCAAGCCCAGGTGGCGTGTACTCAGTCCAAGCACCA 38037 25 100.0 47 ......................... ATCCCAACACTGCTTGGGATCCACACACATGTACCTACCGTTCACCT 38109 25 100.0 39 ......................... CTTTTGTGTCTTTAGGTCTGTACGAACCGGCGAATAGTG 38173 25 100.0 42 ......................... AAGAATGGACAGCAAAGGTATGCAAAATGGCAAGCCAAGTAT 38240 25 92.0 0 ...................G.T... | G [38259] ========== ====== ====== ====== ========================= ================================================= ================== 12 25 99.3 45 GAATCTCCCTAAAGGGAGTAGAAGG # Left flank : AGAACCCAAGTTGTGAAGTTAATCATGGAACTAAGAAGGCACCTAGAAGAACAAAGAATGCCCACGAAAACAACGAACAAGGCCAAGTGTAAGGCGTGCTATTATAGTAAAAACTGCCCAGACTAAGCCCTTCCAAAGAACCAAGTACCTAGCTGGATTCTAAAACCTCAAACTATACCTATTATTTTCACTTAACTCACAAACAACGCAAAAAGCAACGTTTTTGATTAATCCTAGTGAAATTCACACAAATAGCCTAAACATCACATAACTACGTCATTAATAACGACATCATTTAGAAAAACTGAACGCAAAACTACCGTCAGAGGCTCTACGATATTGAGGAATTGAATTGTTCGTTAGAGACTTACGAGTATCGTGATCGTCAGACCGTTAGAGGCTTAACGAGTCGTAACACGATTAAGCGGATAAACCCTCTGATGAAGGTCCGTAAACGGGTATGGAAAAGCTTATAAGGAAATTTATAAATTAATGACTCG # Right flank : GTTGTGGGTTTCTGTGGGGTGTTAGCATGTTATTTTTCTTTCGTATCTGTTTCTCTTGAATATGCCTGTTATGTTGCAGTTTCTTAGTAGGGCTAGGGTTAGTGGTAGTGTTGCGGCGCCTATTTTTCGTTCAATTACCTGCCCTCTGTACTCTCTATCGTTCTGAACCCTACCTAATTCCTGCATTATGAAGTTTATTACGTCGTTCTTCACGCCTCTTCTTTTTCTGGCTAGGTTTAGTGAGTTTGTTAGTACGTCTTCGTAGAAGCTAATGCCTGTTCTATAGCTCCTCCCACCACTACCTAGTTGGTAAGCTACGTAAAGCATTATGCATGGCACGCCCAGGAACCACTCGGAAGGTACTTCGCCACATAGTTTGCCTATATCCCCGGTGAATGCCTCGCGTTTTGCTAAGTCTCTGATGGTAGAGTTAAGGCGTGCCTGTGTTATTTATAATGCGGTAACTTAAAGCATAGGATCTCCTTAGTATGCTTGGCATG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCCCTAAAGGGAGTAGAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //