Array 1 6537098-6535727 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTTT01000001.1 Thermomonospora umbrina strain DSM 43927 Ga0197485_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6537097 29 96.6 32 .........................G... CCGTCCAGTTCCAGATCAGGGTGGAGGAGCAC 6537036 29 96.6 32 .........................G... AACGAGCCCGGCTGCTGTTGCGCACGGTAGTA 6536975 29 96.6 32 .........................G... GGCGCCTACGCCTACGCCGAGATGAGGGACGG 6536914 29 100.0 32 ............................. GCGGATCTCGACGTGCCGCCGGGGATGGCGGT 6536853 29 100.0 32 ............................. TTAGCCAGGTCAGGGGGGTTAGCCGGGTTAGC 6536792 29 100.0 32 ............................. CCCCTGACGGGTGACCTGTCGCTGGGCCCGGT 6536731 29 100.0 32 ............................. GGCAGGGACGGAGAGCGGTACTGCGGGGACTG 6536670 29 100.0 32 ............................. TGGCCGATCGTCGGGATGGCGTTCGTCGCCGG 6536609 29 96.6 32 ............................T CACCCCGCCGGTGCCCAGCCGCCGTGCGGTCT 6536548 29 100.0 32 ............................. GGCAGGGACGGAGAGCGGTACTGCGGGGACTG 6536487 29 100.0 32 ............................. TGGCCGATCGTCGGGATGGCGTTCGTCGCCGG 6536426 29 100.0 32 ............................. TGCTCCGCCAGGCGGACCTGCTCCAGGAACGA 6536365 29 100.0 32 ............................. GCGCTCTCCAGCTTCTCCAGGCGGCGCGCGGT 6536304 29 100.0 32 ............................. CAGCGGGACGCTGAGAAGCGGGATCGCGAGGC 6536243 29 100.0 32 ............................. GCGCCGCCGCCGGTGACGGTCACGGGCCCGGA 6536182 29 100.0 32 ............................. TGCGAGGAGCGATGGCAGCGGGCCCGAGGGCC 6536121 29 100.0 32 ............................. GCATGGGATGCAGCCACCCGACAAGCTGGGCT 6536060 29 100.0 32 ............................. GCGTCCCGCGCCTTGACCTTCTTGTCGCTGGC 6535999 29 100.0 32 ............................. GTGATCAACGCCTTGGGAGAGGATTGGGAGAT 6535938 29 96.6 32 ...T......................... GGCGCTGGTTCTCTGGGACCGCGGCGAACCTC 6535877 29 100.0 32 ............................. TCCACCTTGACCTCGATATCCGTCACAGTGTC 6535816 29 100.0 32 ............................. GGCATTTCCTTCGGCTCTGGTGCGAGCTACAA 6535755 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.3 32 GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Left flank : TGAAGTCGTCGTCACCCTCGGGCGGGGTCGCGCTCTCCCAGTTGGCGAGGCCCGGTTCGGTGAGGGAGGCGGGCAGGGGCTCGCAGAGAGTCATGTGCCGCACTCGTCGGAGGAGGCGAGGATCGTCGGTGAGGTGGATCAGGTGCAGGTCCTGCGGGGAGATCTTGCCCGCTGGTCAGCATGGAGTCCTTGATCCACGCCATCAGGCGGCCCCAGAAGTCGGAGCCGACGAGGACGATCGGGAGCGGGGTGATCTCCTTCGTCTGGACGAGCGTGATGGCGTCCAAGCGCCCGTCCAGGGCGCCGAAGCCGCCGGCAGGACCCTAAAGGCCTGCGAGTACCTCACGAACACGGTCTTGCGGACGAGGCCAACCGAAGCCCCATGCCACCGACAAATGTCGCCCACACGCCGTACGCTCGGCCCATGAGAGATCCCAGCATCAACCCCGACAGGTGGTCTCGAAACGATAACGCCACCACATAGGCGCAGGTCGCGAAGT # Right flank : CCGTACGAGTGCCAGAGGTCGCCGAAGGCCGTCGACGATGAACCTCGACTCTGGCTCGGCCTGCCCCCTGTCGCCACCGTCTTCAACTCCGCTCATCGCCGGAGGGCGTGCCGTGCGAGTCGAGACAAGATCCGGTGATGCTCGACTCCCGTGGCAGATCGTTCGGGGCTGTCGAGTCCCCGCCGCCTTGGCGGCAGGCCCCGATGTCTGCGGCGTCATGCTCGGGCTTCGCGCCTCGACATGGCGGGTTGCCGATGGGGCTCGTGTCGCGGCTCCGGATGCGGGGCGAGTCGCGACGGCGGGGTGTGCTGAACGGCATAGGTGGTCGTGAGGCCACGGCGTAGCGGCCCAGTCGCACAGCCTCAGAACCTCGGTGAAGGTCCCGCCTACCTCTTGCGGGGATGGCGTTGGGGGCGGCAACCCGCTGTCAGGAGCCGCGTCTTATGGCCTGTCTGCGCGGAGCGCGCTTTGCTCGATGTTCCCTCCGTTACGTTGTGAAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCCCGCGCAGGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCAGGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //