Array 1 1152540-1154829 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056896.1 Citrobacter sp. RHBSTW-00021 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1152540 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1152601 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1152662 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1152723 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1152784 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1152845 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1152906 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1152967 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1153028 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1153089 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1153150 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1153211 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1153272 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1153333 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1153395 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1153456 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1153517 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1153578 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1153639 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1153700 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1153761 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1153822 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1153883 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1153944 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1154005 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1154066 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1154127 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1154188 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1154250 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1154311 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1154372 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1154433 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1154494 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1154555 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1154618 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1154679 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1154740 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1154801 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //