Array 1 11164-14755 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALEE010000563.1 Dietzia sp. CW19 NODE_797_length_15272_cov_216.192841, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 11164 29 100.0 32 ............................. AAGGTCGCCACGTCGGACATGATGCAGATGGA 11225 29 79.3 34 .......................NNNNNN NNNNGCAGTCGTCGCAGTCGTCGTCTCGTGGGCA 11288 29 96.6 32 ............................G ATCACCACCAGCAAGTTCGGTCCCCGGATCAA 11349 29 96.6 32 ............................A GGGTCACCTTCCACGCCCCCGAAGTCAGGGCC 11410 29 100.0 32 ............................. ACGTTCGAGACCTGGTGCATGGTCTCGATGGC 11471 29 96.6 32 ............................T ACACCTTCCGTGGCTTGTTCGGCTCGTTCGGC 11532 29 72.4 34 .....................NNNNNNNN NNGCAAACCCTCCGTCGCCTCAGCCGTCACGCCC 11595 29 96.6 32 ............................T CGTCTGCCCGCGGAACTGCAGAACGACCCGCG 11656 29 100.0 32 ............................. GGAGGGTTGCTCGGAGCGGTAATCGGAGGGTT 11717 29 96.6 32 ............................G TGTCCAGCTCGCACTTGCCCGGACGGTGGACC 11778 29 96.6 32 ............................T CCCCCCGGTTGGCTCTATTCGGCGGAGGCTCC 11839 29 100.0 32 ............................. GGGCGGCCCACAGTGACGAGGTGGCCGCGGGC 11900 29 96.6 32 ............................G GAAGGGCTGATGCGGTGGAAGGCCCGCATGAC 11961 29 100.0 32 ............................. CCGTCCTCGTCGGTGTAGCCCTGGAGCTTGAA 12022 29 96.6 32 ............................A GCGGAGATAGAGCCGGGACACATCGGCCCGGA 12083 29 100.0 32 ............................. TTCACACCGGGACGAGGCGGACGCACCATCCG 12144 29 96.6 32 ............................G GCGTGGCCGGGGTCGATGCCGAGACCGACCGC 12205 29 96.6 32 ............................T TCGACGCTGAACCGTCCGGTGTATGCCACTGG 12266 29 96.6 32 ............................G CGACGGAGAACGCCTACGACCGGTGGGTTGAG 12327 29 96.6 32 ............................T TGCCCCGGCACCACATCGCTGGCGGGGGTGAT 12388 29 96.6 32 ............................G GGTACCGCGTTCGGTATGGGTGACGCCGCGAC 12449 29 79.3 35 .......................NNNNNN NNNNGCTCGTCGGCGACGCGAGAATCCCCGTCGGG 12513 29 100.0 32 ............................. TGGAACAACGTACGGCAGGCCATCTACGTGCT 12574 29 79.3 34 .......................NNNNNN NNNNGGGTTCTCGTCTCCAGTCGCTCCGGGACGT 12637 29 96.6 32 ............................G TACGCCGCCGGCTACTACGTCATCGACAACGT 12698 29 100.0 32 ............................. ACCCGCACGTGATCGTCGTCGGCCTGCCGTTC 12759 29 96.6 32 ............................T GGCTCGACGTGTTCGCGGGATCAGACGCTCGC 12820 29 75.9 34 ......................NNNNNNN NNNCGTCACAGGGACGGGGGTCGAGGTAGTCGGT 12883 29 100.0 32 ............................. ACCGACCATCACGTCCAGGGCACGGCCCGACG 12944 29 96.6 32 ............................G CTCACGGTTGTACTTCTCCGACGAACGACCGT 13005 29 79.3 34 .......................NNNNNN NNNNGAAGTTCCCCCGCAGGGACTTCCTACAGCT 13068 29 100.0 32 ............................. GGGCGGCCCACAGTGACGAGGTGGCCGCGGGC 13129 29 100.0 32 ............................. CGCGATCGCTGACACGCCCGCCCACATCATCG 13190 29 82.8 33 ........................NNNNN NNNNNGCAAGCTGCTCGATCTCTCCCTCGAGGG 13252 29 79.3 33 .......................NNNNNN NNNNCAGACGGAGTTCTACGACATCCGCAAGGT 13314 29 75.9 34 ......................NNNNNNN NNNCCGTGTATCCGTCTCCCCCGTCCGGTCCTTC 13377 29 96.6 32 ............................G TACGTCAAGGACTGGGACGCCACCAAGGCTGT 13438 29 96.6 32 ............................A TGGGTCCCAGCAGCGTCGCCCCGAACCGGGAC 13499 29 75.9 32 ......................NNNNNNN NNNACCGTCATGTCACGTGTCGTTCTGCGGAT 13560 29 96.6 32 ............................G CGGAGAGTATCGAGGTCCCTGAGGTGGAGGTC 13621 29 93.1 32 ................T...A........ GAGAAGAGGAACCAAGCATGAGCCAGGGAGAT 13682 29 79.3 34 .......................NNNNNN NNNNCCACTGGAGCGCGCACTTGACCGGGATGAA 13745 29 75.9 31 ......................NNNNNNN NNNAGGTCATCTACGACATCAAGGACAAGAG 13805 29 93.1 32 ....................C.......G GCCACCGACGGGCCGTGGCGCTCGCGTGAGGT 13866 29 100.0 32 ............................. GGCAGGGTGATCGCCCGATTCCCGCCCAGGAA 13927 29 100.0 32 ............................. GTCAACCTCGGTCAGGTGGCGGACACCATCTT 13988 29 82.8 35 ........................NNNNN NNNNNCATCTACAACGTCGCTAAGGGTGTCACCGC 14052 29 100.0 32 ............................. GCGAACCAGTTGTCGAACCAGCGGTCGATCGC 14113 29 100.0 32 ............................. GACCCGCGCGTGCCAGTGCACCGTCTGCCCGC 14174 29 100.0 32 ............................. TGGTTCCGCAGCTCCTGCAGCGCATCGAACTC 14235 29 82.8 35 ........................NNNNN NNNNNCTGGGCAACGCTCGAACCGAACGTGGTCAA 14299 29 100.0 32 ............................. CCCACAAGGAGGCACCCATGGCCGCCGAATAC 14360 29 100.0 32 ............................. AGCGACAACGCCATACGAGCGATCTTGATGAC 14421 29 72.4 33 .....................NNNNNNNN NNCGGCCCGCTACGGGCTGATTCTGCACACGAT 14483 29 96.6 32 ............................G CAGTTCTGCCTTTGAGGTGGGGCACAAAACAC 14544 29 93.1 32 .....................T......G GCGGTCCGCGGCGGAGTCGGTCATGCCGTTGC 14605 29 89.7 32 ........T...........C.......G CAGTGCCTACGACTCGACGGTCTGACCCGTGG 14666 29 79.3 32 .C............A.T.A.....G...G GTGGGGCTTAAGGCTCTGGGGGCCGCTTCGGA 14727 29 69.0 0 ....C...T.......AC.....TCCTA. | ========== ====== ====== ====== ============================= =================================== ================== 59 29 91.9 32 GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Left flank : ATCCCGTAGGCACGCCACGCCGTGACCACCGTCGAGGCCGAGACCTTCAACCGTGTCGCCAGCAGCCGCGACGACCAGTGGGTCACGCCCAGAGACTTCGGCGGCGGCATCAAGGTCGCCGTCACGATCTCCGCGTGATCGATCGTGCGCGGCCGACCAGAACGCTTCTCATCAGCCAAGCCCCCGATGCCCTTGTCCTCGTACCTGCCGCGCCACAGGTTCACCTTCGGCCGCGACGCCCCGGCCAACTCGGCGATCTCCGCATTGCGCCGGCCCTCCGAAGCCAGCAGCACGATGCGTGCTCGCTGCACCATGCCTGCCGACATCGACTGCGAGCGCGTCATTCTCTCAAGCTTCTCGCGATCGCCGGGACGCAACATCAATGCCGGGGCAGGTCGATTCGCCATGCCCCATGATTTCACAAACCCAACCGTAAAACTACTTCACACGCACGACACTAGAACTCCGAGTACTGCTCCATTTTCCGCTGGTCAGCCAGT # Right flank : CGCCACTTGCAATGTCATCCGTGCGGAAACGAAATCGGTTTTGGACTTCTCGGGCTGAATTGTTGTCTGATCTCCCCGCTAGAGTACTAGTGGTCCGCATTTGAAGTCTTCNNNNNNNNNNTTCGCGCCTACCGAACGGCCCAAGCTGGGCGTCGTCCCCGCGCAGGCGGGGCNNNNNNNNNNCACGGCTACGAGAACCAGACCGCGCTCACGTCGTCCCCGCGCAGGCGGGGCTGNNNNNNNNNNTACCGCGACGGCGTCGCCTACTGGGGTGCGTCGTCCCCGCGCAGGCGGGGCTGTTCCCCACACTCTCAAGGCCCTGCGCGACCTCGCCGAGTCGTCCCCGCGCAGGCGGGGCTGTTCCTGAGTCCGGCGACCCCGGTTCATCCTTGAGGACGTCGTCCCCGCGCAGGCGGGGCNNNNNNNNNNGCTGCGGTCGCGGCGATCGACTTGCTCATGTCGTCCCCGCGCAGGCGGGGCTGTTCCTGCACCCGGTCGAC # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGCTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [12-52] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 14906-15296 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALEE010000563.1 Dietzia sp. CW19 NODE_797_length_15272_cov_216.192841, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 14906 29 100.0 31 ............................. NNNCACGGCTACGAGAACCAGACCGCGCTCA 14967 29 93.1 34 ......................TG..... NNNNNTACCGCGACGGCGTCGCCTACTGGGGTGC 15030 29 75.9 32 ......................TGTTCCC CACACTCTCAAGGCCCTGCGCGACCTCGCCGA 15091 29 75.9 32 ......................TGTTCCT GAGTCCGGCGACCCCGGTTCATCCTTGAGGAC 15152 29 100.0 32 ............................. NNNGCTGCGGTCGCGGCGATCGACTTGCTCAT 15213 29 75.9 32 ......................TGTTCCT GCACCCGGTCGACCTCGACCGTCCCGTCCTCC 15274 23 75.9 0 ......................T------ | ========== ====== ====== ====== ============================= ================================== ================== 7 29 85.2 32 GTCGTCCCCGCGCAGGCGGGGCNNNNNNN # Left flank : AGCGATCTTGATGACGTCGTCCCCGCGCAGGCGGGGNNNNNNNNNNCGGCCCGCTACGGGCTGATTCTGCACACGATGTCGTCCCCGCGCAGGCGGGGCTGTTCCGCAGTTCTGCCTTTGAGGTGGGGCACAAAACACGTCGTCCCCGCGCAGGCGGGGTTGTTCCGGCGGTCCGCGGCGGAGTCGGTCATGCCGTTGCGTCGTCCCTGCGCAGGCGGGCCTGTTCCGCAGTGCCTACGACTCGACGGTCTGACCCGTGGGCCGTCCCCGCGCAAGTGAGGCTGGTCCGGTGGGGCTTAAGGCTCTGGGGGCCGCTTCGGAGTCGCCCCTGCGCAGGACGGGCTTCCTACGCCACTTGCAATGTCATCCGTGCGGAAACGAAATCGGTTTTGGACTTCTCGGGCTGAATTGTTGTCTGATCTCCCCGCTAGAGTACTAGTGGTCCGCATTTGAAGTCTTCNNNNNNNNNNTTCGCGCCTACCGAACGGCCCAAGCTGGGC # Right flank : GT # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.26, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAGGCGGGGCNNNNNNN # Alternate repeat : CGTCGTCCCCGCGCAGGCGGGGCN # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCAGGCGGGGGTAATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //