Array 1 731750-733161 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDZI01000001.1 Pluralibacter gergoviae strain DL84A27 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 731750 28 100.0 32 ............................ AGTGCAAATATCTTTCCCATTGAAGTTTTCAA 731810 28 100.0 32 ............................ TGAGACACGGTAGCCGCTACTGTCATTGCTGA 731870 28 100.0 32 ............................ ACCAGCTCGACTTTCGATGAGTGGCCAACATC 731930 28 96.4 33 ..............T............. CTTGGCGGAATTGAGGTTTCCAAAAACAAAGTT 731991 28 100.0 32 ............................ AATGACCAGCAGACTAACCATAACCAAAGAGC 732051 28 100.0 32 ............................ AACTCGCTGAGTGCGTGGCTGGCGCGGCGTTC 732111 28 100.0 32 ............................ TCCCCCCTGCCGTCCGTAGACACTAGCACTAA 732171 28 100.0 32 ............................ TATTAACTATCGCGTCAACTATCAGCCCTCCC 732231 28 100.0 32 ............................ TCAGTGATTTCGGCATGCATCTGTTTGGCAAA 732291 28 100.0 32 ............................ GTGTGCAGGCGGTGATGGCTGATACCGACAAT 732351 28 100.0 33 ............................ ATGCGCCGTACTGTCGCCGCATCCCCGCATTAA 732412 28 100.0 32 ............................ GGTTAGATAAATACCGCTGGCAGGCGTACTAC 732472 28 100.0 32 ............................ CTTCAGGCATGTGTTCCCCAGGAGAAGTAATT 732532 28 100.0 32 ............................ GTGTCCGGGTTGCTTGCATCAATACGCTCGGC 732592 28 100.0 33 ............................ TCTTCCAAGGTTGCTTGCTCCACGCGTTCAAAA 732653 28 100.0 32 ............................ TGGTACGTGGTAGCCAGCAGGATGATACTGAA 732713 28 100.0 32 ............................ TGCGCTGAGTGGGCGGAGGCTTACGGTGCTGA 732773 28 100.0 32 ............................ GTTCTGACCGTCCTCTTAACGATGATCAGATC 732833 28 100.0 32 ............................ AAAAGACCCGATCATCTAAATCGACGATCAGC 732893 28 100.0 32 ............................ GGAGAAAGGCGACACGATAAGCGGCACCGGAG 732953 28 100.0 32 ............................ TGCTGGTATAACTTATCAGACTGATGCTCTTT 733013 28 96.4 32 .........T.................. GTTAACGAGGTCAAAATTCGCATACGCCTCAG 733073 28 100.0 32 ............................ ACTCACCATCAGGCGCCAGACTCGGCCACATT 733133 28 85.7 0 ......G................CTC.. | A [733154] ========== ====== ====== ====== ============================ ================================= ================== 24 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCGCGCGACTGGCTGGCGGAGAAGGGCTACGACCGTGCGATGGGCGCCCGTCCGATGGCCCGCGTTATTCAGGACAACCTGAAGAAGCCGCTGGCCAACGAGCTGCTGTTTGGCAAACTGGTGGACGGCGGCCAGGTGACGGTCGATCTCGATGCCAGCAGCAATACGCTGACCTACGACTTCCAGGCGGCGCAAAAGCGCAAGGCGGAAGCGGCGCACTGAGTGGCGGAAGCGTGACGATAAACCGGGCGAAAGCCCGGTTTTTTTATGTTTGTGGCCCGGCCCGGCCCGGCCCGGCGGTGAAAATGAATAGAAAGTCGGTATGCCGTTATCTGGTTTTATGAGCGACTGGGCTGCCTGCTTTTGCCGACCCTTTTTTTATGCGGGTTGGTAACATATTGATTTTCAATATGCATTTCAGGTGGTAATAAAAAAGGGTCTGCGCCACCAGAATCTGTTTTTTCTGTTTTATAACAGTGTGATAGAGTGTTCGATGGTTA # Right flank : ACATAACCCATTGACCACGTTCCTTAATGAGTGCTACCACTAGACCAAATTCGGGAAGCATTACATCACGCCGCGAGGGAATCATGCAGATCCTGCCATCAGATTTAAAAACCATCCTCCACTCCAAACGCGCCAATATCTACTATCTCGAAAAATGCCGCGTGCAGGTCAACGGCGGGCGGGTGGAGTATGTTACCAGCGAAGGCAGCGAGTCCTGCTACTGGAATATCCCTATCGCCAATACCACGGCGGTTATGCTTGGCATGGGCACCTCGGTGACGCAGGCGGCGATGCGCGAGTTTGCCCGGGCCGGGGTAATGGTCGGTTTTTGCGGCACGGACGGTACGCCGCTGTATGCGGCCAACGAAATGGATATAGATATCTCATGGCTTTGTCCGCAGAGCGAGTACCGGCCGACAGAGTATCTGCAGCAGTGGGTCTCTTTCTGGTTTGATGAAGAGAAGCGGCTGCAGGCGGCAAAGCGATTTCAGCAGGTCAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 742126-742334 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDZI01000001.1 Pluralibacter gergoviae strain DL84A27 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 742126 28 100.0 32 ............................ GGCTTAATCCTCGCATGGAAAACAGCAGAACA 742186 28 100.0 33 ............................ CACCGCGTGTTCCCTCGCGGAAAAACATTTTGT 742247 28 100.0 32 ............................ GTAGTCATCGTCAGATGGCATACGAAAGTAGG 742307 28 82.1 0 .....................CCCA..C | ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CAGCGCGGAGATAGCCGCTGTACCTGCGGGCGCCCGGTGGCGCACCGTCAGCCGCGCGCAGGTGAAAAGCAGCCCGCAGCGCCTGCTGCGCCGCTCGGTGCGCAAGGGCTGGATTTCGCAGGCGGAGGCCGATCGGCGGCAGGCAGTTACGCCGGCCCGAACGCTGAATCTCCCTTATCTGAATCTGAAAAGTCTCTCCAGCCAGCAGCACTTTCGCCTGTTTATCGCCCACGGCGAGCTGCGCCCGATACCCACGGCAGGAGCGTTTAGCAGCTACGGGCTAAGCGCAACGGCCACCGTTCCCTGGTTTTGACCTTACGGACCGCGGTTTTCGCCGCGGCCTTTTCTTTATTACGTTGCGGTTATGAAAACCCTTTTTTTGAGCAATGATCTAACGTATTGATTTTATTTAACTGAAAACGTGAGGTAAAAAAGAGGGTAAAACATGGTTTTTGGGCGTTAATGGTTTTGTAACAGTGGGATAGAGCAGTTTTACTCTT # Right flank : CTCCGGACATAAAAAAGCCGGGAATAAACCCGGCTTAACTTTTCGACTACCCCACGGGCATCAAATCAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATATAGTTTTTACGCATTTTACCGGAGATATGCGCGGTAACTACGTGACCGTTTTCCAGCTCTACGCGGAACATCGTGTTAGGTAACGTTTCGAGAACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCGGGGGTATCACTACCATAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGATTTACCGGTCATCTTTCCGCATACGCGGCGACCGAAATCTTGAGATCGTTTTTGCGCATTGCCCGAACGTCGCACAGATACCGTGAGACGAGCGCAAACCAAAGGGGAGATTCCTGAAACGTCGGCAGGGCAACAGGC # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //