Array 1 16988-12792 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEVZ010000046.1 Dolichospermum sp. LEGE 00240 NODE_45_length_39618_cov_16.9159, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 16987 37 100.0 36 ..................................... GTGCAGCTTGCTTTAACTTCCCTCCTGCTCTACCCA 16914 37 100.0 37 ..................................... TTCCAACCATTAGCAAGTCGTTGTTTAATCAATGCAA 16840 37 100.0 32 ..................................... GGTAAAACCCTATGTGTTCCCCTTCTATAGAA 16771 37 100.0 35 ..................................... GTACTTGACCGAACTCATAATAATTTTCAGCAAGA 16699 37 100.0 34 ..................................... CCCTGTTGAAGATTGTGATATTTCCGAAATAAGA 16628 37 100.0 32 ..................................... GCGCAGTAATTAACCTAAACTATCCCAACTAT 16559 37 100.0 33 ..................................... AATTCTGCATTTTCTTTCTCTTCCCCCGCTTGA 16489 37 100.0 40 ..................................... AATCTTGGGAGTCTTAGGCAATTTTACAGCCGCAACTAAA 16412 37 100.0 33 ..................................... CGCTATTATAAAGAGAGTTAAGGAAGTTAAAAA 16342 37 100.0 35 ..................................... AATATTAGGAGCGTCAAGCAAAATCCTTATTATAA 16270 37 100.0 34 ..................................... TCAATACACATTGAGGAGTTGCAATCAAAGCTAG 16199 37 100.0 35 ..................................... AGACTCTCCCAGTGGCATTTCTTGAAACTCAATTG 16127 37 100.0 39 ..................................... ACTAGACAAGATGGACTTGTCCAAGGATTCACCAACTAT 16051 37 100.0 35 ..................................... GACCGCTGTAAAATTGAACGCCAAGAAAGATGTAC 15979 37 100.0 38 ..................................... TTGTAAAAACCACAGACACCAAAACCCAGAACAACGGG 15904 37 100.0 35 ..................................... TTTAACTCAACTACAGCACTGACAACTAAGGTAGA 15832 37 100.0 35 ..................................... AAAACTGAAATCCTTGACTTATTAAAAGAGGTTTG 15760 37 100.0 36 ..................................... ATTTTGCTCCACCTCCACGATTGAAGGTGTCAGAAT 15687 37 100.0 35 ..................................... GAAATTATTAAATAATTATCTTTAGCTTCTATTAA 15615 37 100.0 33 ..................................... TTTAATTACCGATTGGTGAGATTTTAAATACTC 15545 37 100.0 39 ..................................... TTTTAAGTCTACATATCTAAATTTTTGACCAACTTTCAA 15469 37 100.0 34 ..................................... TAAAAATAAGCTCTTAAATTAACTTAGCGATCGC 15398 37 100.0 37 ..................................... GTAGTTTATCTATGTGGGAAGAAATTTCTAGAGATTC 15324 37 100.0 41 ..................................... TTCTGTGAGTCTTATCTTAATTTTTCCGTCTTGAATTGCAA 15246 37 100.0 34 ..................................... AAGTTCATTTTGAAGATTAGTCTCTTCAATTAAT 15175 37 100.0 43 ..................................... AATTCTCTGATGATAACTAAATCAACACCTAATTTAGCGGCTA 15095 37 100.0 39 ..................................... CATTAGAATTAGTTACATATAATGTACCTGAAGATAGAA 15019 37 100.0 38 ..................................... TCCTTCTGGTTGAGCTTCATAACTTGTGAATACAACAG 14944 37 100.0 37 ..................................... TAGTCCAAGTATGTAATAGCTAATGCCGGAGTCTAAT 14870 37 100.0 37 ..................................... GATCAACAATCAGCTATTTTGGAACAATCAAATAGAC 14796 37 100.0 35 ..................................... GACAAAATGATGACAAAATATCAAAACTTCAAAAA 14724 37 100.0 36 ..................................... TTTAATTCAATATTGCGATAATCATCAGGAATTGCA 14651 37 100.0 37 ..................................... GCTACTCAGGTGGCTAACACAATCCAAGCCGCATCTA 14577 37 100.0 34 ..................................... TTATAAAAAGAAATTTAATCCCCAAAAAATTGAA 14506 37 100.0 38 ..................................... GATTCATAAAGTGCGATAGCTAATTCTTGATTGAATGA 14431 37 100.0 33 ..................................... ATTTCTTCAGGATTTACGGCACAGGACAAGCTG 14361 37 100.0 37 ..................................... CTACTGCTTTTCTGTGTGGGTTTGGTAATGAATTAAA 14287 37 100.0 34 ..................................... AACTGAATCTTTCTTTAACAGTGTACCTATATCA 14216 37 100.0 39 ..................................... ACATTCTCTATAGTCAACCATACCTGCTGACTCACCGAA 14140 37 100.0 35 ..................................... TACTAAATCAGCCCCGCTTTTGCTTTTACTGCTTT 14068 37 100.0 36 ..................................... GATTGAGGCTGACCAATTAGCCGAATACCATCACGG 13995 37 100.0 38 ..................................... AAATCTACCGGCATTTCCAATCGCTCAATCGCTACACC 13920 37 100.0 34 ..................................... TTTTCCTACCTCAATCCCACACTCGGACTCTAAA 13849 37 100.0 35 ..................................... CACTCAACTACTTCGGCAAGGGGATCTTGCAGCCG 13777 37 100.0 35 ..................................... ATTCTCAAGATGTGGCGATCGCACAAACATGGAAC 13705 37 100.0 36 ..................................... AATTATGAAGGGGATAAGCAGCATAAAGCAGAAATC 13632 37 100.0 41 ..................................... ATTTTTATAAGCACTGATACAACCATCTGCAATGCTGCCAA 13554 37 100.0 34 ..................................... AGAAGCAATAAATGAGCTAGGTTGAAAAGTTGGT 13483 37 100.0 33 ..................................... TTATCAATTAGACAAGGCGACAGATAACCTGAA 13413 37 100.0 36 ..................................... AATTGAGCAATCTGCTTACTGGTTATTGCAAACAAC 13340 37 100.0 37 ..................................... TTATCTCCTACTGGTGCGGTTATTGGTACTTCTACTG 13266 37 100.0 33 ..................................... ATTTTATCCCCTCACAAATTTAATCATTTTAAA 13196 37 100.0 40 ..................................... TTCGCTGAGAATCTTAATAAATTCCTTGGATTTAGGGAAA 13119 37 100.0 35 ..................................... TTGCGGATCAGCACTGTTATTCCTGTTGCTATTTA 13047 37 100.0 35 ..................................... TTTACAACATTTACTCATGTTTACGGCACTCCGAG 12975 37 100.0 35 ..................................... TTAAGTTTTTTAACGCGGTTCTGTAAGTGTACAAA 12903 37 100.0 38 ..................................... CATCTGTAGCTGTGGCGATCGCAAATTAATAAGGAGAA 12828 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 58 37 100.0 36 ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : CACTTTATTGATTTTTTTTCAAATATTTGATATACTTATTAACAGTAGGTGTAACTCAATTAAATGCACCAAAAGCAGCCTATCAAAATAAAAGCTAATTGTTCAGCTTAACCAAAGAACCGTGGGACACAGGGTCTTAAAGCTCAGTTAATGTCTCCATAGAAGGGTCGCGCTCGTTGCCCACACTCATCTGAAAGAGAGTGTGTGGAGTATGTCACGGTAAAAAGAATTGGTGGTGAACAGCCCCGTGATCAGACGATTTTCTTTGCTTAATGCGCGAGGGGGTGGGTGTAAAAAATTCAATTTCTCAAAAAATGCCTGAAATTATGTCTACACAAGCTTTTCATGCAATTCATGGAGTTCACCCATCCGCGCACCTTGCACAGCAGGAGTTTCAGCTATTTTACTCCTTGACACTTTTCTTGAAATGGATTATCATGAAACCATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCACCCTGCT # Right flank : ACCACTCCCAAACTCTACCCAATGGTAAATATCTTTATTGCAATTTCACTTACTCCCTGTTTCCGCACATCTAATCCCCGCAAGGGGACTGAAACCTTACTTGAATACGATGGTGACACTGATGAATTAAGTGTGTTGTGGCGATTCCTACGGAGCGCTTCGGAGGAATCGCTCTTAGATTTCCCCCAAGAAAATCACCAAATGCGATCGCGAAGCGCTGCTGCAAGCAGTTCGCCCCTAGCAAATTATCAACGGAAAACATTGCGAAGCCCCCGTAGCGATCGCATATTCCAAGATAACTTTATCAAGATTCTTCCCACTCCTTTGTCGAAGGGTTAAATTTTAGCTTTAAACAATTTATTTTTGAATATGTAGATAAGCCCAATTGTTTAGAAAGCTGCTGATCATAGATTGCTGATTGCCAAGATTTTGCAAGTTTTACTTGTTCAGAGGTTAAGCCTTTAGCGCATTCTAAGCTTGCACCTTTTAAATTAGCATTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 3819-1208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEVZ010000005.1 Dolichospermum sp. LEGE 00240 NODE_4_length_137455_cov_16.3072, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 3818 37 100.0 38 ..................................... ATTTTGCGCTGGCTCACCAAAGCCAACTTTTACAATGC 3743 37 100.0 35 ..................................... TTGGTACCATCAAAAATAAGCAAAGCGTGGACGAG 3671 37 100.0 34 ..................................... ATCGTTCTGCTTTATCCCTAGTCATGTTCATAGC 3600 37 100.0 35 ..................................... AAAATTCAAGATGTTAATGGTGATGACTATATCAT 3528 37 100.0 35 ..................................... AATACACTGATTGATCCCATTAGAAAAATTAGCAA 3456 37 100.0 34 ..................................... TCTTCAGCTTTGTCTTTTTCTCTCCATCCTGCTT 3385 37 100.0 36 ..................................... TAGATATAGCCAGAATGCTAGTTTATATTATTCTTA 3312 37 100.0 37 ..................................... GGGATTTTGCTAGTTTCACCAGCTTTTGGTATGTATC 3238 37 100.0 36 ..................................... ATCCTGGGAAAGATAGGGTTCAGCCGCGAGAAATTA 3165 37 100.0 34 ..................................... AAGTATAAAAAAGAAAAGCAGCCAACACCTGAAG 3094 37 100.0 48 ..................................... TATAAACGGGACTAGTTGATTTTCTCTCCTGCCAGGATTGGGCATCAA 3009 37 100.0 35 ..................................... TTTTTCTCTCCATCCTGCTTGACATTTAAGGTAAA 2937 37 100.0 41 ..................................... AAACAAAGACAGCCGTTGGAACCTAACTGATAACGTACCCA 2859 37 100.0 44 ..................................... ATCAAGATTATTTCGCTATTCCTAAGTCAGATGGGAGAAAGAAA 2778 37 100.0 39 ..................................... TGCAATCTCTGAGACTTAGACTCTGACAATATTTTTTGA 2702 37 100.0 34 ..................................... GACGCATTATTTCCACATCTTCATTTAATATTAA 2631 37 100.0 34 ..................................... ACCACAAGAAGCGATAGAACCATTAACAAAAACA 2560 37 94.6 41 TA................................... ACGACAATTCTACAAGCAACTGAAAACGAGAAAAACAAAGA 2482 37 100.0 34 ..................................... ATTCTACTCTTAGGAGTTGGGAGAAGGGGGACAG 2411 37 100.0 39 ..................................... ACCGGATTCTCAGACGATACCGGGATCTCAATGGTGCGG 2335 37 100.0 35 ..................................... CAGATTTTAACAGAGACTTTTGATAGAAATGGTTG 2263 37 100.0 35 ..................................... ATACTGATATAACTCAGGTGTGATATCTTTATCCT 2191 37 100.0 34 ..................................... TAGCTCATTGGGAAGTAATACTAAGCAGGAGCTA 2120 37 100.0 40 ..................................... AAGTTGCATGATGGGATCAGGTTTAGTTGTGGTGTGGATT 2043 37 100.0 38 ..................................... TTCTGGTAGCCATAATTTTCCTATTTTACAGAAGGGTA 1968 37 100.0 35 ..................................... ACGAGACGCTGTAAAATATCTTGATAAACATCCTG 1896 37 100.0 34 ..................................... TTCTATATAAATGCACTAGTGAAAAAACATTATC 1825 37 100.0 39 ..................................... CAAAGCTGAACATAGGGGACTTTGACCCCACTGCTAAGA 1749 37 100.0 36 ..................................... TTCGTAATTCCCATGCAGATGCGATCGCGTCATCAG 1676 37 100.0 38 ..................................... AAAAAGTAAGTTAAGGAAAGGAACAATGAAGGAACTTA 1601 37 100.0 36 ..................................... AATTCTTCCCAATCTATCCCTAATTCCATTAAGCAT 1528 37 100.0 32 ..................................... CTTATCTTGGAATACTGCTGATTTCAGAGCTA 1459 37 100.0 35 ..................................... AAAGATATCTACAATACCTGATTCTGTTTCTATTG 1387 37 100.0 35 ..................................... AACCTATTGGGGATGTAAAATGTGTTCAAAGTGTA 1315 37 100.0 34 ..................................... CTCCACTATCCCAAAGGAACATTAATAGGAATCC 1244 37 97.3 0 .............................G....... | ========== ====== ====== ====== ===================================== ================================================ ================== 36 37 99.8 37 ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Left flank : ATGAATGTTGTTGTTTCTTACGATATTTCTGAGGATAAACGCCGGACTAAAATCCATAGTATTCTCAAATCCTATGGTCAATGGGTGCAGTATAGTATTTTTGAATGTCAGTTAACTGATACTCAATATGCTAAGTTAAGATCGCGTCTTCATAAACTCATAAAACCTGAGACCGACAGCATTCGCTTTTACTTCCTTTGTGCTTGCTGTTTTGGTAAGGTGGAAAGAATCGGTGGTGAACAACCCCGTGATGAGACAATTTTCTTCGCTTAATGCGCGAGGGGGTGGGTGTAAAAAATTCAATTGCTCAAAAAATGCCTGAAATCATGTCTACACAAGCTTTTCATGCAGTTCATGGAGTTCACCCATCCGCGCACCTTGCACAGCAGGAGTTTCAGCTATTTTACTCCTTGACACTTTTCTTGAAATGGATTATCATAAGAACATCCGCGCAACTGAACCTTGAAAACTACATATATATAGGCTTTCAGCACCCCGCT # Right flank : ATGAATGCGTTATTCTTATTGGAATAATTCTTATTTAGGACTTAAGCACTTTATAAATTCACATTAATTCTTTTTCAATGAGTTCAATTAATTCCAGAATACTACGAGATTGGCTAGGTTCTACATTAGATTCTTCAATTATATGGACATGATGGGGAAAATTAGGTAATTTTGGAAAATGCTGCACATTATCCCAACGTTTTCTTAAATTTTCCTTTTGTTCATCCATCCACTGATAACGATAACCAAGGGTTACAAAATGTCCCTCAATAATAGTAAAGGACTCTGCTATTTCTAAGAAATCATTATTTACTAAAGTTAATCTAGCACGGAAATAACCACGATTCAATAAAATTCTTTCTTCCACAATAGCGATTTTAATAATAATGCGGCTAGTAGCTAATTTAATTTTTACTGTATTAATATAATCTTGTATTTCCATTGTTTAACTAGCTATTAAATTCGTATTTATCTGAATAGTATTTTGAGCATTAGTCCAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACTTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 393-1020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEVZ010000002.1 Dolichospermum sp. LEGE 00240 NODE_1_length_201700_cov_17.3341, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 393 36 100.0 42 .................................... TTTGAACCAAGCTACGCTCAATCTTTTTCAGGCAAAAGAAAT 471 36 100.0 35 .................................... TTTATCTTATGCGATGGGCGCCCAGATGATGAAAA 542 36 97.2 34 ......................A............. CACCCTAACAAAGTCGGCTAATCCGCAGACAAGT 612 36 100.0 40 .................................... TCTGGGTGTCATTAACGCCCCCACGGGCGGTACCGGGCTT 688 36 100.0 44 .................................... GAAATATCGGAAAATTTGCCAATAACAGAGAGACAGAAGAAACA 768 36 100.0 35 .................................... TCTCCAAAAACTACCCAGTGAGATCAGAAACAAGT 839 36 100.0 36 .................................... GGGCGAACCTTAGCCTTTCTAACGTGTTCGACCCAA 911 36 100.0 38 .................................... TCCACGTTCCCCTCAAGGAGGTGACGTGGATTTAAAAT 985 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 9 36 99.7 38 GTTTCCATCCCCGTTAGGGGAAGTGGTAATGGAAAG # Left flank : CATGATACCCATTGGGGAATTGAAAGTTTTCACAGAGCCATTAAACAAGTATGTGGAATTTGTCGATTTATGGTGAGAGATAGCCAAGCAATCAAAACACACATATTTTGTTCACTTCAAGCATTTGCTCGTTTAGAAAAAATGCGCTCTGAAAACATAATTTCTAATTGGTATGAAGTGCAAAGAAACTTATTCACTTTAGTTGTGCGCGACTACATTGTGGACAATCTTACCAATGCTTGTGCTGCTTCATCAACATAGATTCATTTTTTTGTCAATGCGTAAGTCCTAATATTAATGAATGTTTCGCGCAAAGAGGCAAAGAAGCAAAGGCGCAAAGAAATTAATTAGTCTGCTTTCTAAATAATAATTTCCATCAAATCATGTTTTTAG # Right flank : GAGTTCACTTCTGGAAACCTTACTGAGCAAGGGTTTCAGATACCCCAATCGACACACCTCTAAAAAATTGAAAAAATTTCCTAGCCGGCGGCAGATTTTGGAGGCTGAAGTCTTTGCTGTGTAAGCAGGCGACACACCTCAACGAAATTATAGGGTTTTCAAGGTTCGGGCGAGGTGTGTCGAAAAATTTCAACACATTGTATTAATTGTATATAACACTGCGGCAATTGTCAAGAATTTATCCACAAGCCAGCCATCTATTTGTAACAAAGATTTTCGGCATGGGTGTTAAATCTTCAGTTTTGCTAAACCCAAATAACGAATACCTTCAGGAGAAATATCAAACCGACATGGGAGAACTTCTAAACCCAGTTTAATCGCTTCTCGCAACAACTGACCATATACGGGATCTGTTGTATCTCCAGGTGCAAACTCTACACAATCACCTCGATTAATAAAATACAGCATTACCGACCGACTTGCGGGTAAAACTTCCATTA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATCCCCGTTAGGGGAAGTGGTAATGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 86078-88376 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEVZ010000002.1 Dolichospermum sp. LEGE 00240 NODE_1_length_201700_cov_17.3341, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 86078 36 100.0 35 .................................... GGGATTATGAAAAGCCGCTTTGTAACCGACTACGT 86149 36 100.0 39 .................................... TAGGTTTTTGTTAGTCGTGCTAACGTTAGTTACAGTAGT 86224 36 100.0 37 .................................... TCACATAATGGGTGATTAAAACGGGATAGTAATTCAC 86297 36 100.0 35 .................................... AATAAGCTAGTGTGATCTTCATAATCAGTTAAGTA 86368 36 100.0 44 .................................... CTTAATATCATTCACTTTTGAAGTTAGCGAATCGTGATATTTAC 86448 36 100.0 35 .................................... GATAGTTAAGAAGGGGCGCAACCTTATACCTTCCA 86519 36 100.0 35 .................................... TCATTGTTTATTTTTAGCTCCAACAGCCAAGCATG 86590 36 100.0 37 .................................... TTTTTTCAGAAGGTAATCCAATGTCGTTACCTTTATC 86663 36 100.0 35 .................................... TTGACATAACTTAGGTCACTAATATTATTAACTTA 86734 36 100.0 37 .................................... TATCTTAGGATCTGGTATTAGTACGTTACCTGCATTA 86807 36 100.0 37 .................................... GCTTGTTTCATATTCAATTGATGAGTATGATCAGGTT 86880 36 100.0 36 .................................... CCCAATTGGATTTTCAACAGGTGTGTAACCTAATGC 86952 36 100.0 36 .................................... GTTTTCTTATTATTAGTATTCATGTTTTAATCCTTA 87024 36 100.0 38 .................................... AAATCTATCTCGGCGGTTTTATCTTCCCAATTAATTTT 87098 36 100.0 37 .................................... TTCTTAACTCAGTTATCTTGTAATTCTTAATAAGATA 87171 36 100.0 37 .................................... ATCTATCTCGGCGGTTTTGTTTTCCCAGTCAACTTTC 87244 36 100.0 36 .................................... GCAAGTTAAGTTGTTTGATGAAGAAACTCAATTAGA 87316 36 100.0 36 .................................... TCCTTACTTAATTCCCATAATGATTTCCAGTTATTA 87388 36 100.0 43 .................................... AATCCTTTAGTTATGTAATGTTAAAGTTAGAAAAATGAGTCTA 87467 36 100.0 41 .................................... ACAAACAGGTAGAAAAAATAGTCACGCAACAGGATATTGTT 87544 36 100.0 33 .................................... TTGACAGGAATCGAGCAGATCATCATGTTTACC 87613 36 100.0 38 .................................... CTTTATTTTTCTATCTCCAAAATTATCACTACGATAGT 87687 36 100.0 36 .................................... AGTTAACAGATCCAAAGTTATCGAATGTGTTGTTGT 87759 36 100.0 33 .................................... TTGATGCTGAAAACAAATGCCGTGAAGTTGATT 87828 36 100.0 36 .................................... TTAACCCCAGTGTTACGCTTATGTTTGGTATTCTTA 87900 36 100.0 36 .................................... AAATTGAATTCTTAACAAACTAGTGTGATCTTCATA 87972 36 100.0 37 .................................... AACACAAATCGGCACTATTGACGGTAAACAAGATAGA 88045 36 100.0 38 .................................... ACACCTCGTCTTTGATATAAAATTTCTTCTCCTTATCT 88119 36 100.0 36 .................................... CAGGCTGTACCGTCTTTGGAGTTCCACCAAAACGAG 88191 36 100.0 41 .................................... CAAATTAACCAAAATATCTGTCACTATTACTTGTCTTTCTT 88268 36 100.0 37 .................................... ACTTTAATCCTGAAACAGATACCTATTTAGATTCAAT 88341 36 94.4 0 .........................C....A..... | ========== ====== ====== ====== ==================================== ============================================ ================== 32 36 99.8 37 ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Left flank : AAATTATGTTATGTTTTTGTATGTGATCGCTTATGATATTCCCTGTAATAAACGGCGCAAAAAAGTAGCTGATTTATTGGAAGGTTATGGACAGCGTGTACAGTATTCTGTGTTTGAATGCCAGTTAGGTACAGAAAAATACCAGGATTTACGTCGTCAGTTGAGGAAAAAGCTGAAGTTAGAAGAAGATAATGTTAGGTTTTATCCTTTGTCTCGACATACTCTATCTCAGGTGGAAACTTGGGGTGTGGGAATACCTGTGATTGAACCACCTAGTTCAATTATTATTTAGTTTGTTTCCAACAGCGTAGTGTGGCGTTAGCTATGGTTTAGGGAAAATCGCTGAAGTGTTGATTTTATGGTTGTGAACTTCGGTTGCTTATTGGGTAAGGGTTACGCGGTTTTTAATGGTCGTTTTGTGGGCTGGTTGGCGGTGCTTTTTGCTGACCTTCGGAAAGTGGGTCTAGACTCTTTGCACAGTAAGGAGTTAAAATGAAGGG # Right flank : CAGGGGAGGGAGGCGATCATCGGCAGTATATATAAATACATAATAAAATATTTACTGATATTTTGAGAATCAGTAAATTTTAACTATCAATGTTTGGTAAGGGAAACGCTGTAACTTGATAGCTGCATAAACAAGAACCCATGTCAAAGACAAGAAAATATTTGTAATAAAACTCTCAAAATGAGAAAAAGCTTACAGAGTAAGAGTTAGAGAAAACCTTACAAAAATCTTGAGATATTTTAGATTCCTAGACAAACACTGAATCGCGCTCTTATAATTCATCTATAAGCTACACAGGGGATCTACCGATGACGGCAGAATATTGGCGGGCTAAGATTTGGGGGTTATTACATGACCCTGTATTAAAGGCATTACATGACAATAGCGGACGGGGTAAAAATAGCTTCTATAAACAACTAGAAGTAATGAAAGCTTGGGTTGAAATTGGCAAAACCCCCGATGATTCTTGTGGTAAAGCATTAGCAAATATCCTATTAGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCCACTCGCTGGGGATATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 16455-15148 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEVZ010000030.1 Dolichospermum sp. LEGE 00240 NODE_29_length_55172_cov_16.1361, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 16454 36 100.0 41 .................................... TAGTTAAGTTAATATCAACAATAAATTCACCTGTACCTTCA 16377 36 100.0 35 .................................... TATTCATGGCAAGAGTTTTGATGCAATTGTTAAAG 16306 36 100.0 43 .................................... AGCAATATGTCGAAGAGCTTACCCATACTGGGAACTAATGAAA 16227 36 100.0 36 .................................... AAAGTTACGGGCTTAGTCCACAAGGATTAGCGACAC 16155 36 100.0 35 .................................... TTAACTGTCAACTTATTATAGTTAGTCATGATTCT 16084 36 100.0 46 .................................... TCATCTGGCAAGGCATAACTTAATGCCTCTATTTCCCCATTCTTTA 16002 36 100.0 39 .................................... ATTTGTGAGTGCTGTGGTTCTGGAGCTTGAATAACCGGA 15927 36 100.0 36 .................................... AAAGGATTAATCATCTTGCAAGTACATTTTCATAGA 15855 36 100.0 41 .................................... ATCTATATCAGCGAGATAGGGAATTTAATTATTTTTCTCTT 15778 36 100.0 40 .................................... TTTATACCTTGCGTAGTTGCTAAAAATAACCCTTCTAAAC 15702 36 100.0 37 .................................... TACCTTATGAACAAGCTCAGGAATTAAATAAAACTAG 15629 36 100.0 36 .................................... CAGTTTCAATCCCAATTGCTTTAGAATTTTTCTGAG 15557 36 100.0 37 .................................... AAAGTAGAAGCTTCAGCATGGATGGATAACCAAATAA 15484 36 100.0 38 .................................... TTCAGCTGTAAAAGAGCTTGGTGGTGACACCACAATGT 15410 36 100.0 38 .................................... GGAAGAGGAACGAAAACGGTTCGCATTCAGAGACATGA 15336 36 97.2 44 ...............A.................... CCCTAGATGCATAGGCGGGTATACAGTAGGCGATGCCGTTGCTT 15256 36 94.4 37 ...............A..............C..... TATTTCTATTGTTGGTTCAGCTTGCATTTGTGCAATA 15183 35 77.8 0 ................A....CA.GA..-....TC. | A [15150] ========== ====== ====== ====== ==================================== ============================================== ================== 18 36 98.3 39 ATCGCTTCTTTTATAGGAAGTGGAATTAATGGAAAC # Left flank : GGTTTTGATTTGGGATGGTTGCAAGAAACGCACAACACTATCTCCGGCTGTGGCATTGGCAAAGGTGGCAATGGTAACTAAGATAGTATTGATAATTACTGCTGCTAGTCCTAAAGGTGCTATTAGCAAAATAATCAGTGTAATTGTCCCATTGAGAAATGCAACCGCTAAGTTCCGCACTAAGGCAGCACGATTAGAAATATACATGGTTTAGTTGGGATTCGGTATTAATTGTACTTTTTTAAGTTAAATCACACAGAAAATTTATACAAGTGATTTCATGCGAATGACGAATTTATTTATTGGTGATGATTTATTGGCGGCGGGGTCAGGTCAATGGCGGAAATGCTGATGTTTCCGTTTACCCGGCCGATGTCTTTCTGTATAAGGGTTTCAGGGGTTTTGATTGCCTGTTTATTTTCTAAAAGCAGCCCTCAATTGATACCCCGTCGCAAATGGCATCTGGACATTAGGCTCTGTATGGGTTTATAATTACGGGT # Right flank : CCGACTTCTTAAAGAAGTCGGGGATCTTTGGGTTTAGGATATTTTAAATTTCCTCATTCGCATAAGAAGTATTGAATAATCACAAAATTGAGATTATGTTGTTACACGAGATGTCAACAATATAACCAGATTGGTGAGGGAAATTCTACAATGTCAGAACAAAATAAAGATCAAGATCAAGAAATTTTACGTCAATATCTTGATTCAATTAAGGAAGAAGAAGAACGTAAAAAAGTACAAAATTTAGCACGCCTTTCTAGATTAAATATAGGGATTGCTGTTTTCCTTTCTCTGCTCATTCCCATTGGTGGATATTGTTATACCCGACGGTGGAAAGCATTTCTATGGCTTATGTGTGGTGGGGCTTTAATAGGGGTAGTAGTTGCTGGAAATTCTCGTAATAGTGAAGAAGCTATGGCACGAGCTTTTGGTATAGGATCAGTTGCGGGGACAATTATTGCTCCTATTGATAATGCTTTGGCTATTTCTCGTGCGAAAAA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCTTCTTTTATAGGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //